G456742


Basic Information

Item Value
gene id G456742
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 93024291 ~ 93029202 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU517269
caagtcagttaagaacaaattcttatttgcaatgatggcctaccaaaaggcctcctgcggggacaggggcctgggattaaatatttaaaaagtacaatataaatataggacaaaacacacatcacagcaAGAGAGACAACATTACCTAAAGACAACAaaatagcaaggcagcaacacatgacaacacagcatggtagcaacacaacatgacaacaacatggtagcaacacaaaacagggtacaaacattattggggacagtcaacagcacaaagggcaagaaggtagacacaacaatacatcacgcgaagcagccacaactgtcagtaagagtgtccatgattgagtctttgaatgaagagattgagacaaaactgtccagtttgagtgtttgttgcagctcgttccagtcgctagctgtagcgaactgaaaagacgagcgacccagggatgtgtgtgctttggggatttttaacagaatatgactggcagaacaggtgttgtatgtggaggatgagggctgcagtagatatctcagatatggggagtgaggcctaagagggttttataaataagcatcaaccagtgggtcttgtgatgggtacacagagatgaccagtttacggaggagtatagagtgcagtgatgtgtcctataaggagcattggtggcaaatctgatggccgaatggtgaagaacatctagccgctcgagagcacccttacctgccgatcaataaatgatgtctccgtaatctagcatgggtaggatggtcatctgaatcagggttagtttggctgctgcggtgaaagaggagcgattacaatagaggaagtGCACGCTGACCaagtcgccaggtgcacggtgtttcctccgacacattggtgcggctggcttccgggttggatgcgcgctgtgttaagaagcagtgcggcttggttgggttgtgtatcggaagactttcgacctttgtctctcctgagcccatacgggagttgtagcaatgagataagatagtaactactaaacaattggataccacgaaattgggctaaaaataataataataatacatttggtTGGGAATTATTGATGGACAGAAATATTAAAACCTTGTCTGtaattttcaagcagatttaagtcaggaCTGACTTAAACAAGAGCATAATAATTGACAAGAGCATAATAATTGACAAGAGCATAATAATTGACAAGAGCATAATAATTGactggactaaattgtttttggtatctttaagtTTGTTTTCAGTGTACTAAACTAAACTttgttgatttgatgatgtttaagttgaaatggtgcCGAAATAGTGGAGGCAGggctcctgttgtctttgtgctgacttgtgGGTAACTCTGAGGTTGTAAATCAGTAGTTGTTCAGTAAACTGTTGAAAATATTAACTTGAGTGACCACGCTGCAGGTCATAtgactgtttgttacatgcaatatttgctttgtggacttcaccacaGATGTTGCGCTccgggttttgtgatgaaacaaacaaATGTGTAGTTGAATTGATTCTACCACTGCGTGactgttgtctttttgttgtcacGGCCTTATTGTATATCATGGTGGCGTGTGAATGAATGGGTTGAAGAGCAAACGCCGCAAATATCGCAACAGATTTAATATGGAATTTTTACTGGCttggcttggcttcctcagtgattttacccacgcaccgctacgGCTGATTTACACCTTTTGGAAAGCCCttctggtgtgtctttggcatAAAAATTGGTGTAATTGTCcctgggctttgctcctttcatatttcttctgatcctgacaaactcccaAGTCCTTGcaaatgacaagcatacccataacataatgctgccaccccaatacttgaaaatacagagGGTTTCAcactgtgttgtattggatttgacccaaacctGTCGTTAATGTCTTTGCCATGTTGTCTTGCAGTACTTCTTAACGGCCTTGTTGCACACAGAATGGATGATTTGGAGTGGAATTTTTAACACAGGCTTGCGGCAtttatcatgttatgggtatgcttgtcaccaaCAGGGGAGTTtgttaggataaaaataaatatgaaaggagcaaagcccaggtaaaaagttCAAACTTGTCTCAGTCTTTTGATTTTGAAAAAAATCAATGAATATAGGTTTCCCTAAGAGTTTTTCGAACATTATTCAAAATGATTCACAGCCATAATGGCTGTCAACAGTGCAtccaccaagtattaactcaggggtgtggagacatcaaataaaatgttatttgtcacatgctgacTTACATAccctttcccaacaatacagagagaaagaaaatagaaaaagAAAAGTAATAATtcgtaataataaatacacaatggcTCTattacatggggtaccagtacagagtcgaagtgcaggggtacgaggtgatTTGAGGtagacactgtatgtacatatataactaggagtaatactgtatgcacatataactaggagtaatactgtatgtacatatataactaggagtaatactgtatgcacatataactaggagtaata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU517269 True 2570 lncRNA 0.41 2 93024291 93029202
Loading

Neighbor

gene id symbol gene type direction distance location
hps3 hps3 coding upstream 22910 92968501 ~ 93001381 (+)
si:ch211-284e20.8 LOC106560590 coding upstream 70093 92942035 ~ 92957717 (+)
fetub LOC106560589 coding upstream 92673 92927124 ~ 92931618 (+)
ahsg1 LOC106560588 coding upstream 117112 92881372 ~ 92907179 (+)
si:ch211-262h13.5 LOC106560587 coding upstream 148715 92869491 ~ 92875576 (+)
tm4sf4 LOC106560595 coding downstream 62827 93092029 ~ 93098602 (+)
LOC110524836 rpl36 coding downstream 192628 93221830 ~ 93225091 (+)
enc3 LOC106560599 coding downstream 222427 93251629 ~ 93267778 (+)
LOC118964735 NA coding downstream 596230 93625432 ~ 93628212 (+)
LOC110524846 LOC106560502 coding downstream 693458 93722660 ~ 93780941 (+)
G456731 cp non-coding upstream 6869 93002003 ~ 93041462 (+)
G456764 NA non-coding upstream 56618 92962751 ~ 92967673 (+)
G456729 NA non-coding upstream 90474 92931926 ~ 92933817 (+)
G456714 NA non-coding upstream 118581 92890594 ~ 92905710 (+)
G456744 NA non-coding downstream 20152 93049354 ~ 93051144 (+)
G456783 NA non-coding downstream 33279 93062481 ~ 93062746 (+)
G456788 NA non-coding downstream 43458 93072660 ~ 93072878 (+)
G456802 NA non-coding downstream 60325 93089527 ~ 93089752 (+)
G456842 NA non-coding downstream 138323 93167525 ~ 93167747 (+)
G456139 LOC106560602 other upstream 1023533 91943154 ~ 92000758 (+)
dda1 LOC106560571 other upstream 1343560 91678060 ~ 91681757 (+)
G455469 NA other upstream 1534301 91487745 ~ 91489990 (+)
G455211 NA other upstream 1961670 91061090 ~ 91062621 (+)
G455203 LOC106560548 other upstream 2029992 90993865 ~ 90994299 (+)
G456927 NA other downstream 319592 93348794 ~ 93349619 (+)
G458015 NA other downstream 1106716 94135918 ~ 94136269 (+)
G459346 hdlbp other downstream 2673778 95696263 ~ 95706519 (+)

Expression

G456742 Expression in all Baseline Samples

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G456742 Expression in each Bioproject

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G456742 Expression in each Sample
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Co-expression Network