Gene
RNA
| Item | Value |
|---|---|
| gene id | G457772 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 93551096 ~ 93551828 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106565965 isoform X13 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU518513 | True | 418 | lncRNA | 0.42 | 2 | 93551096 | 93551828 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524839 | LOC106560600 | coding | downstream | 138729 | 93300490 ~ 93412367 (-) |
| lonp1 | lonp1 | coding | downstream | 311418 | 93225313 ~ 93239678 (-) |
| lmnb2 | lmnb2 | coding | downstream | 339997 | 93189533 ~ 93211099 (-) |
| commd2 | commd2 | coding | downstream | 372589 | 93170834 ~ 93178507 (-) |
| wwtr1 | LOC106560594 | coding | downstream | 386583 | 93100251 ~ 93164513 (-) |
| use1 | use1 | coding | upstream | 88636 | 93640464 ~ 93652540 (-) |
| LOC110524842 | NA | coding | upstream | 101035 | 93652863 ~ 93702545 (-) |
| si:dkeyp-82a1.6 | LOC106560500 | coding | upstream | 153888 | 93705716 ~ 93709937 (-) |
| atf6 | atf6 | coding | upstream | 257975 | 93809803 ~ 93934248 (-) |
| LOC110524879 | LOC106560647 | coding | upstream | 521160 | 94072988 ~ 94094473 (-) |
| G457724 | NA | non-coding | downstream | 167800 | 93382962 ~ 93383296 (-) |
| G457578 | NA | non-coding | downstream | 251046 | 93297401 ~ 93300050 (-) |
| G457697 | NA | non-coding | downstream | 258118 | 93292716 ~ 93292978 (-) |
| G457696 | NA | non-coding | downstream | 258596 | 93292025 ~ 93292500 (-) |
| G457692 | NA | non-coding | downstream | 266866 | 93283996 ~ 93284230 (-) |
| G457773 | NA | non-coding | upstream | 62 | 93551890 ~ 93552354 (-) |
| G457789 | NA | non-coding | upstream | 29459 | 93581287 ~ 93581578 (-) |
| G457805 | NA | non-coding | upstream | 65275 | 93617103 ~ 93617530 (-) |
| G457817 | NA | non-coding | upstream | 105404 | 93657232 ~ 93659080 (-) |
| G457742 | NA | other | downstream | 88017 | 93462352 ~ 93463079 (-) |
| G457740 | NA | other | downstream | 108683 | 93441900 ~ 93442413 (-) |
| G457595 | NA | other | downstream | 530816 | 93018394 ~ 93020280 (-) |
| G457537 | NA | other | downstream | 584104 | 92950678 ~ 92966992 (-) |
| G457534 | NA | other | downstream | 607571 | 92940506 ~ 92943525 (-) |
| G457909 | NA | other | upstream | 309018 | 93860846 ~ 93863614 (-) |
| G459282 | NA | other | upstream | 2006862 | 95558690 ~ 95559210 (-) |
| G459323 | NA | other | upstream | 2050595 | 95602423 ~ 95602927 (-) |
| G459813 | NA | other | upstream | 2635640 | 96187468 ~ 96187983 (-) |
| G460020 | NA | other | upstream | 2909079 | 96460907 ~ 96464598 (-) |
