G458219


Basic Information

Item Value
gene id G458219
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 94133007 ~ 94133532 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU519075
tttaatgatTTTAAATCATTGCAGTGACATGTGTGTTGTTTTGTTAACAGGAGTGTTGAGCCATAAGGCAGATATTAGCAGACATATACAGAGGGGGAGTTTCCCTCTATTGTTTACCAGGACCAGGTGATCTATTGTTTACCAGGACCAGGTGATATATTCTTTACCAGTACCAGGTGATATATTCTTTACCAGTACCAGGTGATCTATTCTTTAGCATTGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTAGCATTGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTATCATCGGACCATGTGATCTCGTAGTCTTTGAAGACACTCTTCAGCTTCTCAACAGACACTGAATGATCTGCTTTGCCATAGCCCTGaaatagat
>TU519076
tttaatgatTTTAAATCATTGCAGTGACATGTGTGTTGTTTTGTTAACAGGAGTGTTGAGCCATAAGGCAGATATTAGCAGACATATACAGAGGGGGAGTTTCCCTCTATTGTTTACCAGGACCAGGTGATCTATTGTTTACCAGGACCAGGTGATATATTCTTTACCAGTACCAGGTGATCTATTCTTTAGCATTGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTATTTAGCATCGTACCAGGTGATCTATTCTTTAGCATTGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTATCATCGGACCATGTGATCTCGTAGTCTTTGAAGACACTCTTCAGCTTCTCAACAGACACTGAATGATCTGCTTTGCCATAGCCCTGaaatagat
>TU519077
tttaatgatTTTAAATCATTGCAGTGACATGTGTGTTGTTTTGTTAACAGGAGTGTTGAGCCATAAGGCAGATATTAGCAGACATATACAGAGGGGGAGTTTCCCTCTATTGTTTACCAGGACCAGGTGATCTATTGTTTACCAGGACCAGGTGATATATTCTTTACCAGTACCAGGTGATATATTCTTTACCAGTACCAGGTGATCTATTCTTTAGCATTGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTATTTAGCATCGTACCAGGTGATCTATTCTTTAGCATTGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTATCATCGGACCATGTGATCTCGTAGTCTTTGAAGACACTCTTCAGCTTCTCAACAGACACTGAATGATCTGCTTTGCCATAGCCCTGaaatagat
>TU519078
tttaatgatTTTAAATCATTGCAGTGACATGTGTGTTGTTTTGTTAACAGGAGTGTTGAGCCATAAGGCAGATATTAGCAGACATATACAGAGGGGGAGTTTCCCTCTATTGTTTACCAGGACCAGGTGATATATTCTTTACCAGTACCAGGTGATATATTCTTTACCAGTACCAGGTGATCTATTCTTTAGCATTGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTAGCATTGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTATCATCGGACCATGTGATCTCGTAGTCTTTGAAGACACTCTTCAGCTTCTCAACAGACACTGAATGATCTGCTTTGCCATAGCCCTGaaatagat
>TU519079
tttaatgatTTTAAATCATTGCAGTGACATGTGTGTTGTTTTGTTAACAGGAGTGTTGAGCCATAAGGCAGATATTAGCAGACATATACAGAGGGGGAGTTTCCCTCTATTGTTTACCAGGACCAGGTGATCTATTGTTTACCAGGACCAGGTGATATATTCTTTACCAGTACCAGGTGATATATTCTTTACCAGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTATTTAGCATCGTACCAGGTGATCTATTCTTTAGCATTGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTATCATCGGACCATGTGATCTCGTAGTCTTTGAAGACACTCTTCAGCTTCTCAACAGACACTGAATGATCTGCTTTGCCATAGCCCTGaaatagat
>TU519080
tttaatgatTTTAAATCATTGCAGTGACATGTGTGTTGTTTTGTTAACAGGAGTGTTGAGCCATAAGGCAGATATTAGCAGACATATACAGAGGGGGAGTTTCCCTCTATTGTTTACCAGGACCAGGTGATCTATTGTTTACCAGGACCAGGTGATATATTCTTTACCAGTACCAGGTGATCTATTCTTTAGCATTGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTATTTAGCATCGTACCAGGTGATCTATTCTTTAGCATTGTACCAGGTGATCTATTCTTTAGCATCGTACCAGGTGATCTATTCTTTATCATCGGACCATGTGATCTCGTAGTCTTTGAAGACACTCTTCAGCTTCTCAACAGACACTGAATGATCTGCTTTGCCATAGCCCTGaaatagat

Function

NR:

description
PREDICTED: 14 kDa phosphohistidine phosphatase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU519075 False 472 lncRNA 0.40 2 94133007 94133532
TU519076 False 474 lncRNA 0.40 3 94133007 94133532
TU519077 False 499 lncRNA 0.39 2 94133007 94133532
TU519078 False 447 lncRNA 0.39 3 94133007 94133532
TU519079 False 472 lncRNA 0.40 2 94133007 94133532
TU519080 True 447 lncRNA 0.40 3 94133007 94133532

Neighbor

gene id symbol gene type direction distance location
LOC110524880 LOC106592820 coding downstream 17928 94103599 ~ 94115079 (-)
LOC110524878 LOC106560653 coding downstream 33778 94094979 ~ 94099229 (-)
LOC110524879 LOC106560647 coding downstream 38534 94072988 ~ 94094473 (-)
atf6 atf6 coding downstream 198759 93809803 ~ 93934248 (-)
si:dkeyp-82a1.6 LOC106560500 coding downstream 423070 93705716 ~ 93709937 (-)
scyl3 scyl3 coding upstream 31706 94165238 ~ 94174003 (-)
LOC110524883 LOC106560651 coding upstream 78944 94212476 ~ 94221154 (-)
zgc:153916 LOC106560658 coding upstream 101930 94235462 ~ 94286184 (-)
lmo4b lmo4 coding upstream 694574 94828106 ~ 94863090 (-)
hs2st1b LOC106560611 coding upstream 847892 94978892 ~ 95053916 (-)
G458160 NA non-coding downstream 128909 94002456 ~ 94004098 (-)
G458159 NA non-coding downstream 131914 94000542 ~ 94001093 (-)
G458136 NA non-coding downstream 172648 93959439 ~ 93960359 (-)
G457925 NA non-coding downstream 196568 93936211 ~ 93936439 (-)
G457918 NA non-coding downstream 223655 93907441 ~ 93909352 (-)
G458231 NA non-coding upstream 2433 94135965 ~ 94136230 (-)
G458258 NA non-coding upstream 47978 94181510 ~ 94199088 (-)
G458260 NA non-coding upstream 51012 94184544 ~ 94201958 (-)
G458214 NA non-coding upstream 57730 94191262 ~ 94210711 (-)
G458264 NA non-coding upstream 60776 94194308 ~ 94197857 (-)
G457909 NA other downstream 269393 93860846 ~ 93863614 (-)
G457742 NA other downstream 669928 93462352 ~ 93463079 (-)
G457740 NA other downstream 690594 93441900 ~ 93442413 (-)
G457595 NA other downstream 1112727 93018394 ~ 93020280 (-)
G457537 NA other downstream 1166015 92950678 ~ 92966992 (-)
G459282 NA other upstream 1425158 95558690 ~ 95559210 (-)
G459323 NA other upstream 1468891 95602423 ~ 95602927 (-)
G459813 NA other upstream 2053936 96187468 ~ 96187983 (-)
G460020 NA other upstream 2327375 96460907 ~ 96464598 (-)
G460331 NA other upstream 2647311 96780843 ~ 96782021 (-)

Expression


Co-expression Network