XLOC_023706 (CU633479.1)


Basic Information

Item Value
gene id XLOC_023706
gene name CU633479.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 40734996 ~ 40744672 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046756
ACCGTCACTGTGAAGGAGTGCGATGTTCACCCTCAGAACCCGCCAAAGTTTGATAAGATTGAGGACATGGCGATGTTCACCTTCCTGCACGAGCCTGCTGTGCTGTTTAACCTCAAAGAGCGTTACGCAGCCTGGATGATCTACACCTACTCTGGCCTCTTCTGTGTCACTGTCAACCCCTACAAGTGGCTGCCAGTGTACAATCAGGAGGTGGTCGTTGCTTACAGAGGAAAGAAGAGGAGTGAAGCTCCTCCTCACATCTTCTCCATCTCTGACAACGCCTACCAGTACATGCTGTCAGATAGAGAAAACCAGTCCATTCTGATCACTGGAGAATCTGGTGCTGGAAAGACTGTGAACACTAAGAGAGTCATTCAGTACTTTGCCAGCATTGCTGCAGGTAGTAGCAAGAAGGACAGCAGCAGTGAAAAGAAGGGTACTCTGGAGGATCAAATCATCCAGTGTAATCCTGCTCTGGAGGCTTTCGGGAATGCCAAGACCATCAGGAATGACAATTCATCTCGCTTTGGCAAATTCATTCGAATACACTTTGCTGCTAGTGGAAAGCTAGCTTCTGCTGATATTGAGActtATCTCCTGGAGAAGTCTCGTGTGACTTTCCAGCTCAAGGCTGAGAGAGATTATCACATCTTCTACCAGATTCTGTCTCAGAAGAAACCAGAACTTCTGGAGATGCTGCTGATCACAGCAAACCCGTACGATTATGCCTTCATCTCCCAAGGAGAGACGCAAGTTGCCTCTATTGATGATTCTGATGAGCTGATGGCTACAGATGAAGCGTTTGATGTGCTGGGCTTCACCCAAGAGGAGAAGAACAGCATCTACAAGCTGATTGGCGCCATCATGCACTACGGCAACATGAAGTTCAAGCAGAAGCAGAGAGAGGAACAGGCCGAGGCTGATGGCACTGAGGAAACAGACGCTGATAAATCAGCGTATCTGATGGGCCTGAACTCTGCTGACCTCATCAAGGCTCTGTGCCACCCAAGAGTCAAAGTGGGAAACGAGTGGGTCACCAAAGGACAGAATGTCCAGCAGGTGTACTATGCTATTGGTGCCCTTTCCAAATCTGTGTATGAGAAGATGTTCCTCTGGATGGTGGTGAGAATCAACCAATCCCtggacaccaaacagcctcgccAGTACTTCATTGGTGTGCTGGACATTGCTGGCTTTGAGATCTTTGATTTCAACACCTTTGAGCAGCTGTGCATCAACTTCACTAATGAGAAGTTGCAGCAGTTCTTCAACCACCACATGTTTGTGCTGGAGCAAGAGGAATACAAGAAAGAGGGCATTGACTGGGAGTTTATTGACTTCGGCATGGACTTACAGGCTTGCATTGATCTCATTGAAAAGCCCATGGGTATCATGTCTATCCTTGAAGAGGAGTGCATGTTCCCTAAAGCAAGTGATGCAACCTTTAAAGCAAAGCTTTATGACAACCACTTGGGGAAATCCAACAACTTCCAGAAGCCCAGGATTGTCAAGGGTAAACCAGAGGCTCATTTCTCCCTGGTTCACTACGCTGGCACTGTTGACTACAACATCAATAACTGGCTGGTGAAGAACAAGGATCCTCTCAACGAGACTGTTGTTGGCCTGTATCAGAAGTCCACCATGAAACTGTTGTCAAACCTGTTTGCTGGATATGCTGGTGCTGAGTCAGCCGCGGATGGAGGAGGAGGTGGCAAAGGAaaggagaagaagaaaaaggGCTCTTCTTTTCAGACAGTGTCTGCACTTCACAGGGAGAACTTGAATAAGCTGATGACCAACTTGAGGTCAACTCACCCTCACTTTGTGCGCTGCATCATCCCCAATGAGACTAAGACTCCTGGGGCGATGGAGAATCCTCTGGTCATGCACCAGCTGCGCTGTAACGGTGTGCTGGAGGGCATCAGAATCTGCAGAAAGGGCTTCCCCAACAGGATCCTGTATGGAGATTTCAAACAGAGATACCGCATCCTGAACCCTGCTGCTATCCCTGAGGGTCAGTTCATTGACAGCAGGAAAGGAGCAGAAAAACTACTGGGGTCTCTGGACATTGATCACAACCAGTACAGGTTTGGCCATACTAAGgtgTTTTTTAAGGCTGGTCTTCTGGGTACTCTTGAGGAGATGCGAGATGACCGTCTTGCCCTCATCATTACTGGTATTCAAGCAAGAGCTCGTGGTATTCTCTCAAGAATTGAGTTCCAGAAGATTGTTGATCGGAGAGATGCCCTGCTGGTGATCCAGTGGAATGTGCGTGCCTTCATGGGGGTCAAGAATTGGCCTTGGATGAAGCTGTACTTCAAGATCAAACCACTGCTGAGATCTGCTGAAGCTGAGAAAGAGATGGCCAACATGAAGGAAGAATTCCTGAAGCTGAAGGAGGCTTATGCCAAATCTGAAGCTCGCAGAAAGGAGCTTGAAGAAAAGATGGTTTCTCTTCTCCAAGAGAAGAATGACCTGCAGCTTGCAGTGCAGTCTGAGCAAGATAATCTTTGCGATGCTGAAGAAAGATGTGAAGGTTTGATCAAGAACAAGATCCAGCTTGAGGCCAAAGCCAAAGAGCTGACGGAGAGGCTGGAGGATGAAGAGGAAATGAATGCTGAGCTGACTGCCAAAAAGAGAAAGCTGGAGGATGAATGCTCTGAACTCAAGAAAGACATTGATGATCTGGAGCTCACTCTGGCCAAAGTGGAGAAGGAGAAACATGCCACTGAGAACAAGGTTAAGAACCTGACAGAAGAGATGGCAGCTTTAGATGAGATTATCGCTAAGCTGACCAAGGAGAAGAAAGCTCTACAGGAGGCCCATCAGCAAACACTGGACGACCTCCAGAGTGAGGAAGACAAAGTCAACACACTCACCAAAGCCAAAGCCAAGCTGGAGCAGCAAGTGGATGATCTCGAAGGTTCCCTGGAACAGGAAAAGAAGCTTCGTATGGATCTGGAAAGGGCAAAGAGGAAGCTGGAGGGAGACTTAAAGTTGACCCAAGAGAGTGTGATGGACCTGGAAAATGACAAACAACAACTGGAAGAGAGACTTAAAAAGAAGGATTTTGAGATCAGCCAGCTCAGTAGCAGGATTGAAGATGAGCAGGCAATGGCAGCCCAACTCCAGAAGAAACTGAAGGAGCTGCAGGCCCGAATTGAAGAGCTTGAGGAAGAGCTGGAGGCTGAGAGAGCTGCTCGTGCCAAAGTTGAGAAACAGAGAGCCGATCTGTCCAGAGAACTGGAGGAGATCAGCGAGAGATTGGAGGAGGCTGGTGGAGCCACCGCTGCCCAGATCGAGATGAACAAGAAACGTGAAGCTGAGTTCCAGAAACTGCGCAGAGACCTTGAAGAGGCCACTCTGCAGCATGAGGCCACAGCTTCTACCCTGAGGAAGAAACATGCCGACAGTGTGTCTGATCTGGGAGAGCAGATCGACAACCTTCAGAGAGTCAAGCAGAAGCTGGAGAAAGAGAAGAGCGAACTCAGACTGGAACTGGACGATGTGGTCTCCAACATGGAGCAGATTGTAAAGGCCAAGGCAAATTTAGAGAAGATGTGCAGGACCCTTGAAGATCAGATGTCAGAATATAGAACAAAATATGAAGAAGCGCAACGCAGCATCAATGACTTTACAATGCAAAAAGCAAAGCTGCAAACTGAGAATGGGGAGCTTTCGAGACAGCTGGAAGAAAAAGATTCATTGGTCTCTCAGCTAACCAGAGGCAAGCAGTCCTACACCCAGCAGATTGAGGACCTCAGGAGACAACTTGAGGAGGAAGTCaagGCAAAGAATGCCCTGGCCCATGCAGTTCAGTCTGCTCGTCATGATGCTGAATTGTTGAGGGAGCAATATGAAGAGGAGCAGGAAGCCAAAGCTGAGCTGCAGCGTAGTCTGTCCAAGGCAAACTCTGAAGTGGCTCAGTGGAGAACCAAGTATGAAACTGATGCCATCCAGAGGACTGAGGAGCTGGAGGATGCTAAGAAGAAGCTGGCTCAGCGTCTGCAAGATGCAGAAGAGGCTGTGGAAGCTGTTAATGCTAAATGCTCCTCTCTGGAGAAGACCAAGCACAGGCTCCAGAATGAGATTGAAGATCTTATGGTGGACGTGGAGAGATccaatgctgctgctgctgctctggACAAGAAGCAAAGAAACTTTGACAAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000098747

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046756 True 4170 mRNA 0.48 27 40734996 40744672

Neighbor

gene id symbol gene type direction distance location
XLOC_023705 CU633479.5 coding downstream 3691 40728978 ~ 40731305 (-)
XLOC_023704 smyhc3 coding downstream 8923 40712794 ~ 40726073 (-)
XLOC_023703 smyhc2 coding downstream 34400 40680153 ~ 40700596 (-)
XLOC_023702 smyhc1 coding downstream 66788 40656510 ~ 40668208 (-)
XLOC_023701 aoc1 coding downstream 725550 40001290 ~ 40009446 (-)
XLOC_023707 CU633479.2 coding upstream 18348 40763020 ~ 40774028 (-)
XLOC_023708 NA coding upstream 66859 40811531 ~ 40814280 (-)
XLOC_023709 cebp1 coding upstream 76027 40820699 ~ 40830494 (-)
XLOC_023710 CU633479.6 coding upstream 111069 40855741 ~ 40860603 (-)
XLOC_023711 NA coding upstream 129269 40873941 ~ 40875493 (-)
XLOC_023665 dre-mir-735 misc downstream 2556969 38177961 ~ 38178027 (-)
XLOC_023698 CT573356.1 non-coding downstream 1008018 39726846 ~ 39726978 (-)
XLOC_023689 NA non-coding downstream 1508938 39224712 ~ 39226058 (-)
XLOC_023687 NA non-coding downstream 1579909 39150622 ~ 39155087 (-)
XLOC_023685 NA non-coding downstream 1643133 39032176 ~ 39091863 (-)
XLOC_023684 NA non-coding downstream 1801793 38917646 ~ 38933203 (-)
XLOC_023713 NA non-coding upstream 163853 40908525 ~ 40910541 (-)
XLOC_023714 NA non-coding upstream 388593 41133265 ~ 41152077 (-)
XLOC_023717 CABZ01084145.1 non-coding upstream 510202 41254874 ~ 41254989 (-)

Expression


Co-expression Network