XLOC_023708



Basic Information


Item Value
gene id XLOC_023708
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 40811531 ~ 40814280 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00046887
ATTACTGAGGCTTTATTTACCGTCAGTGAACGCGTTTGTTCGGTTGTTCGGCGGAAAACTGATCAACAACACAGAAACGAGAGGCGCTTTTGTTTGTGTAGAGAAACCGTGAACGCGCAGAACGGGCCGAGAAAACAGCAGCagcatcttcatcatcctcatcttcagtgtgtgtttgtgctggaaATCTGATGTGAGCAGAGCTTCATCTGGATCTGCAGGAGCAGGTTGTCTGTGTTCTTCAGTGTGAggaagagagagagcgagagacacagacacacacagtctatctttctctctctctctctttcttctctCCATCATG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00046887 True 325 lncRNA 0.47 2 40811531 40814280

Neighbor


gene id symbol gene type direction distance location
XLOC_023707 CU633479.2 coding downstream 37503 40763020 ~ 40774028 (-)
XLOC_023706 CU633479.1 coding downstream 66859 40734996 ~ 40744672 (-)
XLOC_023705 CU633479.5 coding downstream 80226 40728978 ~ 40731305 (-)
XLOC_023704 smyhc3 coding downstream 85458 40712794 ~ 40726073 (-)
XLOC_023703 smyhc2 coding downstream 110935 40680153 ~ 40700596 (-)
XLOC_023709 cebp1 coding upstream 6419 40820699 ~ 40830494 (-)
XLOC_023710 CU633479.6 coding upstream 41461 40855741 ~ 40860603 (-)
XLOC_023711 NA coding upstream 59661 40873941 ~ 40875493 (-)
XLOC_023712 wdr48a coding upstream 61967 40876247 ~ 40901410 (-)
XLOC_023713 NA coding upstream 94245 40908525 ~ 40910541 (-)
XLOC_023665 dre-mir-735 misc downstream 2633504 38177961 ~ 38178027 (-)
XLOC_023698 CT573356.1 non-coding downstream 1084553 39726846 ~ 39726978 (-)
XLOC_023689 NA non-coding downstream 1585473 39224712 ~ 39226058 (-)
XLOC_023687 NA non-coding downstream 1656444 39150622 ~ 39155087 (-)
XLOC_023685 NA non-coding downstream 1719668 39032176 ~ 39091863 (-)
XLOC_023684 NA non-coding downstream 1878328 38917646 ~ 38933203 (-)
XLOC_023714 NA non-coding upstream 318985 41133265 ~ 41152077 (-)
XLOC_023717 CABZ01084145.1 non-coding upstream 440594 41254874 ~ 41254989 (-)
XLOC_023720 NA non-coding upstream 519786 41334066 ~ 41334636 (-)

Expression



Co-expression Network