Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_023709 |
| gene name | cebp1 |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007135.7 |
| NCBI id | CM002908.2 |
| chromosome length | 42172926 |
| location | 40820699 ~ 40830494 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| cebp1 | Enables DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within myeloid cell differentiation; positive regulation of gene expression; and regulation of neutrophil differentiation. Is expressed in several structures, including ectoderm; hematopoietic cell; hematopoietic system; peripheral olfactory organ; and segmental plate. |
| id | name | namespace |
|---|---|---|
| GO:0030099 | myeloid cell differentiation | biological_process |
| GO:0010628 | positive regulation of gene expression | biological_process |
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0045658 | regulation of neutrophil differentiation | biological_process |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0005515 | protein binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-010611-1 | Enables DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within myeloid cell differentiation; positive regulation of gene expression; and regulation of neutrophil differentiation. Is expressed in several structures, including ectoderm; hematopoietic cell; hematopoietic system; peripheral olfactory organ; and segmental plate. |
| ensembl_id | ENSDARG00000101096 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00046758 | True | 1186 | mRNA | 0.53 | 3 | 40820699 | 40830494 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_023708 | NA | coding | downstream | 6419 | 40811531 ~ 40814280 (-) |
| XLOC_023707 | CU633479.2 | coding | downstream | 46671 | 40763020 ~ 40774028 (-) |
| XLOC_023706 | CU633479.1 | coding | downstream | 76027 | 40734996 ~ 40744672 (-) |
| XLOC_023705 | CU633479.5 | coding | downstream | 89394 | 40728978 ~ 40731305 (-) |
| XLOC_023704 | smyhc3 | coding | downstream | 94626 | 40712794 ~ 40726073 (-) |
| XLOC_023710 | CU633479.6 | coding | upstream | 25247 | 40855741 ~ 40860603 (-) |
| XLOC_023711 | NA | coding | upstream | 43447 | 40873941 ~ 40875493 (-) |
| XLOC_023712 | wdr48a | coding | upstream | 45753 | 40876247 ~ 40901410 (-) |
| XLOC_023713 | NA | coding | upstream | 78031 | 40908525 ~ 40910541 (-) |
| XLOC_023714 | NA | coding | upstream | 302771 | 41133265 ~ 41152077 (-) |
| XLOC_023665 | dre-mir-735 | misc | downstream | 2642672 | 38177961 ~ 38178027 (-) |
| XLOC_023698 | CT573356.1 | non-coding | downstream | 1093721 | 39726846 ~ 39726978 (-) |
| XLOC_023689 | NA | non-coding | downstream | 1594641 | 39224712 ~ 39226058 (-) |
| XLOC_023687 | NA | non-coding | downstream | 1665612 | 39150622 ~ 39155087 (-) |
| XLOC_023685 | NA | non-coding | downstream | 1728836 | 39032176 ~ 39091863 (-) |
| XLOC_023717 | CABZ01084145.1 | non-coding | upstream | 424380 | 41254874 ~ 41254989 (-) |
| XLOC_023720 | NA | non-coding | upstream | 503572 | 41334066 ~ 41334636 (-) |
