G459004



Basic Information


Item Value
gene id G459004
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 95128303 ~ 95128753 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU519965
tcccaatggaaaccaaagggctcatatacagtgaggggaaaaaagtatttgatcccctgctgattttgtacgtttgcccactgacaaagaaatgatcagtctataattttaatggtaggtttatttgaacagtgagagacagaataacaacaaaaaaatccagaaaaacgcatgtcaaaaatgttataaattgatttgcattttaatgagggaaataggtatttgaccccctctcaatcagaaagatttctggctcccaggtgtcttttatacaggtaacaaactgagtttaggagcacactcttaaagggagtgctcctaatctcagtttgttacctgtataaaagacacctgtccacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaagagctccccaaggatgtcagggacaagactgtagacctac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU519965 True 451 lncRNA 0.39 1 95128303 95128753

Neighbor


gene id symbol gene type direction distance location
LOC110524856 cldn18 coding downstream 3379 95111855 ~ 95124924 (-)
hs2st1b LOC106560611 coding downstream 74387 94978892 ~ 95053916 (-)
lmo4b lmo4 coding downstream 265213 94828106 ~ 94863090 (-)
zgc:153916 LOC106560658 coding downstream 842119 94235462 ~ 94286184 (-)
LOC110524883 LOC106560651 coding downstream 907149 94212476 ~ 94221154 (-)
sox14 sox14 coding upstream 216395 95345148 ~ 95349127 (-)
trnap-ugg-7 NA coding upstream 568408 95697161 ~ 95697232 (-)
hdlbpa hdlbp coding upstream 570683 95699436 ~ 95722598 (-)
dtymk dtymk coding upstream 785121 95913874 ~ 95922379 (-)
zgc:103559 LOC106560661 coding upstream 803233 95931986 ~ 95957022 (-)
G459003 NA non-coding downstream 870 95126914 ~ 95127433 (-)
G458917 NA non-coding downstream 141550 94986044 ~ 94986753 (-)
G458846 NA non-coding downstream 163881 94964177 ~ 94964422 (-)
G458845 NA non-coding downstream 164135 94963958 ~ 94964168 (-)
G459028 NA non-coding upstream 22293 95151046 ~ 95186324 (-)
G459039 NA non-coding upstream 60266 95189019 ~ 95259610 (-)
G459040 NA non-coding upstream 108341 95237094 ~ 95244848 (-)
G459068 NA non-coding upstream 153509 95282262 ~ 95282818 (-)
G459132 NA non-coding upstream 172308 95301061 ~ 95301383 (-)
G457909 NA other downstream 1264689 93860846 ~ 93863614 (-)
G457742 NA other downstream 1665224 93462352 ~ 93463079 (-)
G457740 NA other downstream 1685890 93441900 ~ 93442413 (-)
G457595 NA other downstream 2108023 93018394 ~ 93020280 (-)
G457537 NA other downstream 2161311 92950678 ~ 92966992 (-)
G459282 NA other upstream 429937 95558690 ~ 95559210 (-)
G459323 NA other upstream 473670 95602423 ~ 95602927 (-)
G459813 NA other upstream 1058715 96187468 ~ 96187983 (-)
G460020 NA other upstream 1332154 96460907 ~ 96464598 (-)
G460331 NA other upstream 1652090 96780843 ~ 96782021 (-)

Expression



Co-expression Network