G459506



Basic Information


Item Value
gene id G459506
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 95743609 ~ 95743979 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU520610
gctcgagttttgcaaggaggaatggaaaaaatttcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggtgctacaaagcattaacttaagggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacctcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtatacagtatttCCATaaattttttcaac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU520610 True 371 lncRNA 0.38 1 95743609 95743979

Neighbor


gene id symbol gene type direction distance location
hdlbpa hdlbp coding downstream 21011 95699436 ~ 95722598 (-)
trnap-ugg-7 NA coding downstream 46377 95697161 ~ 95697232 (-)
sox14 sox14 coding downstream 394482 95345148 ~ 95349127 (-)
LOC110524856 cldn18 coding downstream 618685 95111855 ~ 95124924 (-)
hs2st1b LOC106560611 coding downstream 689693 94978892 ~ 95053916 (-)
dtymk dtymk coding upstream 169895 95913874 ~ 95922379 (-)
zgc:103559 LOC106560661 coding upstream 188007 95931986 ~ 95957022 (-)
LOC118964700 NA coding upstream 193807 95937514 ~ 95939648 (-)
trnap-ugg-8 NA coding upstream 1096523 96840502 ~ 96840573 (-)
trnap-cgg-2 NA coding upstream 1096785 96840764 ~ 96840835 (-)
G459495 NA non-coding downstream 49702 95693647 ~ 95693907 (-)
G459494 NA non-coding downstream 50240 95693100 ~ 95693369 (-)
G459493 NA non-coding downstream 55663 95687713 ~ 95687946 (-)
G459491 NA non-coding downstream 60894 95682502 ~ 95682715 (-)
G459489 NA non-coding downstream 64387 95679016 ~ 95679222 (-)
G459509 NA non-coding upstream 2946 95746925 ~ 95747148 (-)
G459512 LOC106560642 non-coding upstream 8010 95751989 ~ 95752516 (-)
G459513 NA non-coding upstream 9269 95753248 ~ 95753563 (-)
G459515 NA non-coding upstream 11974 95755953 ~ 95756226 (-)
G459517 NA non-coding upstream 16002 95759981 ~ 95760190 (-)
G459323 NA other downstream 140682 95602423 ~ 95602927 (-)
G459282 NA other downstream 184399 95558690 ~ 95559210 (-)
G457909 NA other downstream 1879995 93860846 ~ 93863614 (-)
G457742 NA other downstream 2280530 93462352 ~ 93463079 (-)
G457740 NA other downstream 2301196 93441900 ~ 93442413 (-)
G459813 NA other upstream 443489 96187468 ~ 96187983 (-)
G460020 NA other upstream 716928 96460907 ~ 96464598 (-)
G460331 NA other upstream 1036864 96780843 ~ 96782021 (-)
G460354 NA other upstream 1080256 96824235 ~ 96831126 (-)
G460623 NA other upstream 1284540 97028519 ~ 97030389 (-)

Expression



Co-expression Network