G459521


Basic Information

Item Value
gene id G459521
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 95775794 ~ 95776782 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU520631
GTTTATTTTCATAAAGAATTCAATTGCAGTAAGTTATAACGATATTCTGTCATATGTCAGTTCAATGAAATAAAATGTGTATAAACAGAATAAGAAACATAGTAAGAATAAACACTTAGGTTCAGAGTAAATTAAAAGCTGAACATTATCAACTGACTGAAATACATCAAGAGTGTGACTGGTTATATCtcctctgcatcccaaatggcaaccctttccctatatagtgcactacttttgaccagagccctattggccctgATCAGAAGAAGTGCATCATgcagggttctccaaccctgttcctggagagccaccctcctgtaggtttacaccagggcttttctaaccctgttcctggagagctaccctcctgtaggtttacaccagggctctataaccctgttcctggagatctaccctcctgtaggtttacaccagggctctccaaccctgttcctggagatctaccctcCTGTAAGTttacaccagggctctccaaccctgttcctggagagctaccatcctgtaggttttcactccaaccccattTGAAACGAACCTAATTCAGTTCATCAACCGTCTAATTATTGTGAACGCCCTGATATAAGGCatagatagggtgccatttgagatgcagaccTCATTCAGAAAGACCTTTCTATCTGAAGCAGGCAGTTGCCTGGGGAACAGTGTGCCGTCGGTTCAGGATGCGGTTGGCAGTCTGTAAAACATGGTAGCGCTGCCTGAGGTGTTTCCTCTGGACGTACTCATTGGTGACCTGCACCGCACAGTAATCCGGGAACCAGCCCCGCTCACCGTCCGCAAGTCTCCTGCCCTCTAGGAAACCTGCGATAGCGAGACATGTtgttagtgggggggggggtatgaagATGGACTTCCAAGACATGATTACAAGCAGTATTGGGATTGAGAAAAGC
>TU520632
GTTTATTTTCATAAAGAATTCAATTGCAGTAAGTTATAACGATATTCTGTCATATGTCAGTTCAATGAAATAAAATGTGTATAAACAGAATAAGAAACATAGTAAGAATAAACACTTAGGTTCAGAGTAAATTAAAAGCTGAACATTATCAACTGACTGAAATACATCAAGAGTGTGACTGGTTATATCtcctctgcatcccaaatggcaaccctttccctatatagtgcactacttttgaccagagccctattggccctgATCAGAAGAAGTGCATCATgcagggttctccaaccctgttcctggagagccaccctcctgtaggtttacaccagggcttttctaaccctgttcctggagagctaccctcctgtaggtttacaccagggcttccgaaccctgttcctggagagctaccctcctgtaggtttacaccagggctctccaaccctgttcctggagatctaccctcCTGTAAGTttacaccagggctctccaaccctgttcctggagagctaccatcctgtaggttttcactccaaccccattTGAAACGAACCTAATTCAGTTCATCAACCGTCTAATTATTGTGAACGCCCTGATATAAGGCatagatagggtgccatttgagatgcagaccTCATTCAGAAAGACCTTTCTATCTGAAGCAGGCAGTTGCCTGGGGAACAGTGTGCCGTCGGTTCAGGATGCGGTTGGCAGTCTGTAAAACATGGTAGCGCTGCCTGAGGTGTTTCCTCTGGACGTACTCATTGGTGACCTGCACCGCACAGTAATCCGGGAACCAGCCCCGCTCACCGTCCGCAAGTCTCCTGCCCTCTAGGAAACCTGCGATAGCGAGACATGTtgttagtgggggggggggtatgaagATGGACTTCCAAGACATGATTACAAGCAGTATTGGGATTGAGAAAAGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU520631 False 938 lncRNA 0.46 2 95775794 95776782
TU520632 True 938 lncRNA 0.47 2 95775794 95776782

Neighbor

gene id symbol gene type direction distance location
hdlbpa hdlbp coding downstream 53196 95699436 ~ 95722598 (-)
trnap-ugg-7 NA coding downstream 78562 95697161 ~ 95697232 (-)
sox14 sox14 coding downstream 426667 95345148 ~ 95349127 (-)
LOC110524856 cldn18 coding downstream 650870 95111855 ~ 95124924 (-)
hs2st1b LOC106560611 coding downstream 721878 94978892 ~ 95053916 (-)
dtymk dtymk coding upstream 137092 95913874 ~ 95922379 (-)
zgc:103559 LOC106560661 coding upstream 155204 95931986 ~ 95957022 (-)
LOC118964700 NA coding upstream 161004 95937514 ~ 95939648 (-)
trnap-ugg-8 NA coding upstream 1063720 96840502 ~ 96840573 (-)
trnap-cgg-2 NA coding upstream 1063982 96840764 ~ 96840835 (-)
G459518 NA non-coding downstream 10143 95764800 ~ 95765651 (-)
G459517 NA non-coding downstream 15604 95759981 ~ 95760190 (-)
G459515 NA non-coding downstream 19568 95755953 ~ 95756226 (-)
G459513 NA non-coding downstream 22231 95753248 ~ 95753563 (-)
G459512 LOC106560642 non-coding downstream 23278 95751989 ~ 95752516 (-)
G459557 NA non-coding upstream 81288 95858070 ~ 95858736 (-)
G459564 NA non-coding upstream 91033 95867815 ~ 95868820 (-)
G459561 NA non-coding upstream 93443 95870225 ~ 95873068 (-)
G459567 NA non-coding upstream 99680 95876462 ~ 95925173 (-)
G459588 NA non-coding upstream 124274 95901056 ~ 95901402 (-)
G459323 NA other downstream 172867 95602423 ~ 95602927 (-)
G459282 NA other downstream 216584 95558690 ~ 95559210 (-)
G457909 NA other downstream 1912180 93860846 ~ 93863614 (-)
G457742 NA other downstream 2312715 93462352 ~ 93463079 (-)
G457740 NA other downstream 2333381 93441900 ~ 93442413 (-)
G459813 NA other upstream 410686 96187468 ~ 96187983 (-)
G460020 NA other upstream 684125 96460907 ~ 96464598 (-)
G460331 NA other upstream 1004061 96780843 ~ 96782021 (-)
G460354 NA other upstream 1047453 96824235 ~ 96831126 (-)
G460623 NA other upstream 1251737 97028519 ~ 97030389 (-)

Expression


Co-expression Network