G459557



Basic Information


Item Value
gene id G459557
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 95858070 ~ 95858736 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU520673
ccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtagctccacattgatctggtactggtactccctgtatgtagctccacattgatctggtactccctgtatatagctccacattgattgggtactggtactccctgtatatagctccacattgatctggtactggtacttcctgtatatagcttcacattgatctggtactccctgtatatagcttcacattgatctggtacttcctgtatatagcgtcacattgatctggtactccctgtatatagcttcacattgatctggtactccctgtatatagcttcacattgatctggtactggtacttcctgtatgtagctccattcTTGTATATTTCA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU520673 True 469 lncRNA 0.41 2 95858070 95858736

Neighbor


gene id symbol gene type direction distance location
hdlbpa hdlbp coding downstream 135472 95699436 ~ 95722598 (-)
trnap-ugg-7 NA coding downstream 160838 95697161 ~ 95697232 (-)
sox14 sox14 coding downstream 508943 95345148 ~ 95349127 (-)
LOC110524856 cldn18 coding downstream 733146 95111855 ~ 95124924 (-)
hs2st1b LOC106560611 coding downstream 804154 94978892 ~ 95053916 (-)
dtymk dtymk coding upstream 55138 95913874 ~ 95922379 (-)
zgc:103559 LOC106560661 coding upstream 73250 95931986 ~ 95957022 (-)
LOC118964700 NA coding upstream 79050 95937514 ~ 95939648 (-)
trnap-ugg-8 NA coding upstream 981766 96840502 ~ 96840573 (-)
trnap-cgg-2 NA coding upstream 982028 96840764 ~ 96840835 (-)
G459521 NA non-coding downstream 81288 95775794 ~ 95776782 (-)
G459518 NA non-coding downstream 92419 95764800 ~ 95765651 (-)
G459517 NA non-coding downstream 97880 95759981 ~ 95760190 (-)
G459515 NA non-coding downstream 101844 95755953 ~ 95756226 (-)
G459513 NA non-coding downstream 104507 95753248 ~ 95753563 (-)
G459564 NA non-coding upstream 9079 95867815 ~ 95868820 (-)
G459561 NA non-coding upstream 11489 95870225 ~ 95873068 (-)
G459567 NA non-coding upstream 17726 95876462 ~ 95925173 (-)
G459588 NA non-coding upstream 42320 95901056 ~ 95901402 (-)
G459581 atg4b non-coding upstream 44050 95902786 ~ 95905803 (-)
G459323 NA other downstream 255143 95602423 ~ 95602927 (-)
G459282 NA other downstream 298860 95558690 ~ 95559210 (-)
G457909 NA other downstream 1994456 93860846 ~ 93863614 (-)
G457742 NA other downstream 2394991 93462352 ~ 93463079 (-)
G457740 NA other downstream 2415657 93441900 ~ 93442413 (-)
G459813 NA other upstream 328732 96187468 ~ 96187983 (-)
G460020 NA other upstream 602171 96460907 ~ 96464598 (-)
G460331 NA other upstream 922107 96780843 ~ 96782021 (-)
G460354 NA other upstream 965499 96824235 ~ 96831126 (-)
G460623 NA other upstream 1169783 97028519 ~ 97030389 (-)

Expression



Co-expression Network