XLOC_023722


Basic Information

Item Value
gene id XLOC_023722
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 41407032 ~ 41414837 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046889
agcatgtctcatattgtcagaCATACAGCCTGGGTTGGTTATCATTTTGTTCAACTGTGGTGATTTTAAAACTGCATTGTTTACACTGCTTGCAATTCAGTTCAACTCCATCATCCACAGGTATGAACAACATAACCTCAGCGTGGCGTCGTGCACCAGTGACGTGATTCAGGTGCAGAATGACAATGAAAACCAGCTCGTTGAACACTCCGAACAGATCAAGAGTCTAAACAATGCTTTAGAGAAGCTGGACGAGGACATGAACATAACAGTCCAAGATGTGGCGAACTTGGAGAGACAAATCGAGGAGAAAAACGCTGAGCTTGAGAGACATCTTGAACACTTGTCGGAAAAAAATCATGACTTGAGTATCATGAGTGCGCTGGTGCCTGCTTTTGGCTTCTTGATTAAGGCCATGGTGGATGCAGCGACTGATCCTGATGAAGCTGCTAAAACTCAATCTCTCAACGACGATCTGTCCCAACTCACCGCTCAAAAGAGGGATCTGCAAATAAAAGAGTGGGACATCCATGTTAAACAGACTGAGCTGCAGCTGGAGCTCTCCACTGCTAAAATACAACTGGGTGTGATTCCCGACCCCGTGCATCTGAAGGACGTGCAGAAATGTCTTTCTCAAATGCAGCAGAATCTGGTCGACCTGAAAAACTTCTGGGAAAAATTTTCAAGTCTGCTGGACTTCCTGAAGAAGAGGACCTTCTTGAATGAAGAGCTGATCAAAGAGCTCAGTGACATGGTGGAAGAGATTCTGATGTCTATTAAAGTTGCTAGAGAGttttggatgaaatTCGGCTCCATGTGTTTGGTCGTTCTGGACATCCTCAAGGTTCTGTTTAAAGATGGATATAAATTCCTGGAGAACAACCCGTCTTCAATGTCACCGGATATCGGCAGTTCCAGCACAACATTATCCTTGATCAACTGAACTTCATCAACACCCGAGCTTCACTCAAATAGAGGACACTTTCAGGCTTCTTCAGCCTTTCATATGCTCTTCCTATAGGGCAAACATGTACAGCTGAATTAAAAGCCCTGCTGTATATTTGTAACCCTATTTCTTTttagcggagagaagattttttcagcacatttctatacataatagctttaataactcatctctaataaatgatttcttttatattgaCCATGTTGACAGCacaagtgacatgtaaaggcttcactagggtaattagggtaaagttaaagtaattaggcaagtcattgtacaacagtgttttttttttctggagacaatccaacactaatattgctgaaggggtgaataatattgagcttaaaatggtgtttaaaaaattaaaaactgcttttattatagctgaaataaaacaagtaagaatAAAACAAGTGCTAAAATTTGTTAAATCCACCTGATACTCTTTTGTGGACTGATGTTATGAACATTATTAATGTCCTGTTTCTTAACTGTAGGTTACAATAGCTTTGGGTTTCATAATGGGGAATgaatgatcatcatcatcataataataataataatgatcatataATAAAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046889 True 1552 lncRNA 0.39 3 41407032 41414837

Neighbor

gene id symbol gene type direction distance location
XLOC_023721 NA coding downstream 63986 41338306 ~ 41343046 (-)
XLOC_023720 NA coding downstream 72396 41334066 ~ 41334636 (-)
XLOC_023719 rheb coding downstream 86995 41316714 ~ 41320037 (-)
XLOC_023718 crygn2 coding downstream 94573 41305391 ~ 41312459 (-)
XLOC_023716 xylb coding downstream 139848 41233755 ~ 41267184 (-)
XLOC_023723 NA coding upstream 31711 41446548 ~ 41460124 (-)
XLOC_023724 CABZ01084131.1 coding upstream 52004 41466841 ~ 41478917 (-)
XLOC_023725 CABZ01044099.1 coding upstream 139776 41554613 ~ 41657005 (-)
XLOC_023726 lrrc30a coding upstream 263420 41678257 ~ 41679356 (-)
XLOC_023727 arhgap28 coding upstream 371437 41786274 ~ 41797681 (-)
XLOC_023665 dre-mir-735 misc downstream 3229005 38177961 ~ 38178027 (-)
XLOC_023717 CABZ01084145.1 non-coding downstream 152043 41254874 ~ 41254989 (-)
XLOC_023714 NA non-coding downstream 254955 41133265 ~ 41152077 (-)
XLOC_023713 NA non-coding downstream 496491 40908525 ~ 40910541 (-)
XLOC_023728 CABZ01081282.1 non-coding upstream 411869 41826706 ~ 41826822 (-)
XLOC_023729 NA non-coding upstream 508949 41923786 ~ 41927167 (-)
XLOC_023730 NA non-coding upstream 522362 41937199 ~ 41938777 (-)
XLOC_023733 NA non-coding upstream 676372 42091209 ~ 42094078 (-)

Expression


Co-expression Network