G459738


Basic Information

Item Value
gene id G459738
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 96035820 ~ 96038994 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU520883
GTGCTGCTATAGCAACACAGAGGAACACCGTAGGCAGGTAGGTGCTGCTATATCAACACAGCAACCAATTCAAAGAAAAACACCAGTCCGTATACTTTCTGTTAAGCCAAGATGGCACACAACACTTCTACCACCATACATTTGGAGGCCATCTGTTGAAACACAGTAGCTAAtagcaatgtaaaaaaaaatgagaTAGCAAACTACAGtagagagaaacagtagagagagaaacagtagagagagaaacagtagagagagaaacagtagagagagaaacagtagagagagaaacagtagagagagaaacagtagagaaacagtagagagaaacagtagagagagaaacagtagagagagagaaacaagagaaacagtagagagaaacagtagagagaaacagtagagagagaaacagtagagagagaaacagtagagagagaaacagtaacacACATTTCAAACCAGCAATGTCAGTGCCAAGCGCTGGCCCCTTGTAtgctaggagagaaagagagagagaacacagagaaagacaagaggagagacaggaaaacAAAACTGTGAGGgattcactcattcactcagtgTTAGCTGAACAGCTGGTGCCAACATACTGGTTCTGCTAACATACTGGTTCTGCTAGCATTCTGGTTCTGCTAGCATACTGGTTCTGCTAGCATTCTGGTTCTGCTAGCATACTGGTTCTGCTAGCATACTGGTTCTGCTAACATACTAGTTCTGCTAACATTCTAGTTCTGATAACATACTGGTTCTGATAACATACTGGTTCTGATAACATACTGGTTCTGCTAGCATGCTGGTTCTGCTAACATACTAGTTCTGCTAACATTCTAGTTCTGATAACATACTGGTTCTGATAACATACTGGTTCTGCTAGCATACTGGTTCTGCTAACATACTAGTTCTGCTAACATTCTAGTTCTGATAACATACTGGTTCTGATAACATACTGGTTCTGATAACATACTGGTTCTGCTAGCATGCTGGTTCTGCTAACATACTGGTTCTGCTAGCATACTGGTTCTGCTAGCATACTAGTGGTGCTAACACACTGGTTCTGATAACATACTGGTTCTGCTAGCATATTGGTTCTGCTAGCATTCTGGTTCTGCTAGCTTACTGGTTCTGATACCATACTGGTGGTGCTAACATACTGGTTCTGCTAGCCTACTGGTTCTGCTAACATACTGGTTCTGCTAACATACTGGTGGTGCTAGCATACTGGTTCTGCTAGCCTACTGGTTCTGATAACATACTGGTTCTGCTAACATACTGGTGGTGCTAACATACTGGTGGTGCTAGCATACTGGTTCTGATAACATACTGGTTCTGCTAGCATACTGGTTCTGATAACATACTGGTTCTGCTAGCATACTGGTTCTGCTAGCATACTAGTTCTGACAACATACTGGTTCTGCTAGCATACTGGTTCTGCTAGCATACTGGTTCTGATAACATACTGGTTCTGATAACATACTGGTGGTGCTAACATACTGGTTCTGCTAGCCTACTGGTTCTGCTAACATACTGGTTCTGCTAACATACTGGTGGTGCTAGCATACTGGTTCTGCTAACATACTGGTTCTGCTAGCATACTGGTTCTGCTAACATACTGGTCCTGGTAACATACTGGTTCTGCTAACCTACTGGTCCTGTTAACATACTGGTTCTGCTAACATACTGGTTCTGCTAGCATACTGGTTCTGATAACATACTGGTTCTGCTAGCATACTGGTTCTGATAACATACTGGTTCTGATAACATACTGGTTCTGATAACATACTGGTCCTGCTAACATACTGGTCCTGCTAACCTACTGGTTCTGCTAACATACTGAGCCAGGA
>TU520885
agagaaaaacagtagagagagaaacagtagagagagaaacagtagagagagaaacagtagagagaaaaagtagagagagaaacagtacagagagaaacagtagagagagaaacagtagagagagaaagagtagacagagaaacagtagagagagaaacagtagagagagaaagagtagacagagaaacagtagagactgagaaacagtagagagagaaacagtagagagagaaacagtagagagagagaaacagtagagagagaaacaatagagagaaacagtagagagagaaacagtagagagagaaacagtagagagagaaacagtacagagagaaacagtacagagagaaactgtagagagagaaagagtagagagagaaacagtagagagagagaaacagcagagagagaaacagtagagagagaaacatgagagaaacagtagagagaaacagtagagagaaagagtagagagaaacagtagagagaaagagtaaagagaaacagtagagagaaacagtagagagagaaacagtagagagagaaacagtagagagaaacagtagagagagaaacagtagagagaaacagtagagagaaacagtagagagagaaacagtagagagagaaacagtagagagagaaacagtaacacACATTTCAAACCAGCAATGTCAGTGCCAAGCGCTGGCCCCTTGTAtgctaggagagaaagagagagagaacacagagaaagacaagaggagagacaggaaaacAAAACTGTGAGGgattcactcattcactcagtgTTAGCTGAACAGCTGGTGCCAACATACTGGTTCTGCTAACATACTGGTTCTGCTAGCATTCTGGTTCTGCTAGCATACTGGTTCTGCTAGCATTCTGGTTCTGCTAGCATACTGGTTCTGCTAGCATACTGGTTCTGCTAACATACTAGTTCTGCTAACATTCTAGTTCTGATAACATACTGGTTCTGATAACATACTGGTTCTGATAACATACTGGTTCTGCTAGCATGCTGGTTCTGCTAACATACTAGTTCTGCTAACATTCTAGTTCTGATAACATACTGGTTCTGATAACATACTGGTTCTGCTAGCATACTGGTTCTGCTAACATACTAGTTCTGCTAACATTCTAGTTCTGATAACATACTGGTTCTGATAACATACTGGTTCTGATAACATACTGGTTCTGCTAGCATGCTGGTTCTGCTAACATACTGGTTCTGCTAGCATACTGGTTCTGCTAGCATACTAGTGGTGCTAACACACTGGTTCTGATAACATACTGGTTCTGCTAGCATATTGGTTCTGCTAGCATTCTGGTTCTGCTAGCTTACTGGTTCTGATACCATACTGGTGGTGCTAACATACTGGTTCTGCTAGCCTACTGGTTCTGCTAACATACTGGTTCTGCTAACATACTGGTGGTGCTAGCATACTGGTTCTGCTAGCCTACTGGTTCTGATAACATACTGGTTCTGCTAACATACTGGTGGTGCTAACATACTGGTGGTGCTAGCATACTGGTTCTGATAACATACTGGTTCTGCTAGCATACTGGTTCTGATAACATACTGGTTCTGCTAGCATACTGGTTCTGCTAGCATACTAGTTCTGACAACATACTGGTTCTGCTAGCATACTGGTTCTGCTAGCATACTGGTTCTGATAACATACTGGTTCTGATAACATACTGGTGGTGCTAACATACTGGTTCTGCTAGCCTACTGGTTCTGCTAACATACTGGTTCTGCTAACATACTGGTGGTGCTAGCATACTGGTTCTGCTAACATACTGGTTCTGCTAGCATACTGGTTCTGCTAACATACTGGTCCTGGTAACATACTGGTTCTGCTAACCTACTGGTCCTGTTAACATACTGGTTCTGCTAACATACTGGTTCTGCTAGCATACTGGTTCTGATAACATACTGGTTCTGCTAGCATACTGGTTCTGATAACATACTGGTTCTGATAACATACTGGTTCTGATAACATACTGGTCCTGCTAACATACTGGTCCTGCTAACCTACTGGTTCTGCTAACATACTGAGCCAGGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106535092

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU520883 False 1868 lncRNA 0.43 3 96035820 96038994
TU520885 True 2072 lncRNA 0.42 3 96035820 96038187

Neighbor

gene id symbol gene type direction distance location
zgc:103559 LOC106560661 coding downstream 78798 95931986 ~ 95957022 (-)
LOC118964700 NA coding downstream 96172 95937514 ~ 95939648 (-)
dtymk dtymk coding downstream 113441 95913874 ~ 95922379 (-)
hdlbpa hdlbp coding downstream 313222 95699436 ~ 95722598 (-)
trnap-ugg-7 NA coding downstream 338588 95697161 ~ 95697232 (-)
trnap-ugg-8 NA coding upstream 801508 96840502 ~ 96840573 (-)
trnap-cgg-2 NA coding upstream 801770 96840764 ~ 96840835 (-)
LOC110524866 LOC106560606 coding upstream 1117054 97156048 ~ 97157070 (-)
LOC118964738 NA coding upstream 1121791 97160785 ~ 97161999 (-)
LOC110524862 LOC106560604 coding upstream 1134973 97173967 ~ 97192535 (-)
G459595 NA non-coding downstream 104089 95931381 ~ 95931731 (-)
G459567 NA non-coding downstream 110647 95876462 ~ 95925173 (-)
G459581 atg4b non-coding downstream 130017 95902786 ~ 95905803 (-)
G459588 NA non-coding downstream 134418 95901056 ~ 95901402 (-)
G459776 NA non-coding upstream 61553 96100547 ~ 96101294 (-)
G459779 NA non-coding upstream 78695 96117689 ~ 96120785 (-)
G459778 NA non-coding upstream 82640 96121634 ~ 96126775 (-)
G459788 NA non-coding upstream 109496 96148490 ~ 96157209 (-)
G459803 NA non-coding upstream 131067 96170061 ~ 96170332 (-)
G459323 NA other downstream 432893 95602423 ~ 95602927 (-)
G459282 NA other downstream 476610 95558690 ~ 95559210 (-)
G457909 NA other downstream 2172206 93860846 ~ 93863614 (-)
G457742 NA other downstream 2572741 93462352 ~ 93463079 (-)
G457740 NA other downstream 2593407 93441900 ~ 93442413 (-)
G459813 NA other upstream 148474 96187468 ~ 96187983 (-)
G460020 NA other upstream 421913 96460907 ~ 96464598 (-)
G460331 NA other upstream 741849 96780843 ~ 96782021 (-)
G460354 NA other upstream 785241 96824235 ~ 96831126 (-)
G460623 NA other upstream 989525 97028519 ~ 97030389 (-)

Expression


Co-expression Network