G461084


Basic Information

Item Value
gene id G461084
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 97745033 ~ 98111611 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU522707
gaaaGTCTAACCTTAAAcccaaccctagctcctaacccgtaccctaatcctaaccttaacctgaaaGTCTAACCTTAAAcccaaccctagctcctaacccgtaccctaatcctaaccttaacctgaaaGTCTAACCTTAAAcccaaccctagctcctaacccataccctaatcctaaccttaacctgaaaGTCTAACCTTAAAcccaaccctagctcctaacccttaacgtaattctaaccttaaacctaaaccGCCTAGAAATAGCATTAGACCTCGTAGGGACTTCTAGTCCCCACAAGAATTGGTTCAACAcgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU522707 True 318 lncRNA 0.44 2 97745033 98111611

Neighbor

gene id symbol gene type direction distance location
LOC110524914 tomm70 coding upstream 37027 97677327 ~ 97708006 (+)
LOC110510444 NA coding upstream 176441 97290197 ~ 97568592 (+)
LOC110524865 NA coding upstream 578078 97164039 ~ 97166955 (+)
LOC110524859 inpp5d coding upstream 601350 97098550 ~ 97143683 (+)
gpr17 gpr17 coding upstream 651780 97077790 ~ 97093253 (+)
oca2 LOC106591054 coding downstream 165071 98276682 ~ 98442265 (+)
LOC110523047 LOC106560665 coding downstream 949766 99061377 ~ 99101070 (+)
LOC110524867 bivm coding downstream 1048295 99159906 ~ 99178822 (+)
LOC110523045 NA coding downstream 1084729 99196283 ~ 99207807 (+)
LOC110490602 LOC106560622 coding downstream 1262544 99374155 ~ 99401558 (+)
G461093 NA non-coding upstream 2089 97736878 ~ 97742944 (+)
G461072 NA non-coding upstream 41345 97703156 ~ 97703688 (+)
G461065 NA non-coding upstream 42257 97702202 ~ 97702776 (+)
G461051 NA non-coding upstream 75276 97669548 ~ 97669757 (+)
G461042 NA non-coding upstream 77448 97638514 ~ 97667585 (+)
G461220 NA non-coding downstream 7605 98119216 ~ 98122093 (+)
G461221 NA non-coding downstream 13015 98124626 ~ 98124939 (+)
G461224 NA non-coding downstream 18037 98129648 ~ 98144054 (+)
G461236 NA non-coding downstream 62730 98174341 ~ 98177386 (+)
G461237 NA non-coding downstream 70137 98181748 ~ 98182891 (+)
G460428 NA other upstream 822221 96922332 ~ 96922812 (+)
ryk LOC106560633 other upstream 1212979 96474920 ~ 96619822 (+)
G459843 NA other upstream 1497071 96247286 ~ 96247962 (+)
G459346 hdlbp other upstream 2038514 95696263 ~ 95706519 (+)
G458015 NA other upstream 3608764 94135918 ~ 94136269 (+)
G461826 NA other downstream 562645 98674256 ~ 98677063 (+)
G461827 NA other downstream 563521 98675132 ~ 98675999 (+)
G461999 NA other downstream 662871 98774482 ~ 98779067 (+)
G462037 NA other downstream 720846 98832457 ~ 98834433 (+)
G462233 NA other downstream 947272 99058883 ~ 99059354 (+)

Expression


Co-expression Network