G461121 (jade3)


Basic Information

Item Value
gene id G461121
gene name jade3
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 97812808 ~ 97815973 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU522758
GAACACAGATGTTACATTTGTCACAGAAGACCATGTCGTTGCCCTCCTCGCTGTCGGGGGAGCGACACACGTCACAGATGACATCCTCGTCGTACTCGATGCCCAGCCCTTCTACCGTGTCGATGGCGTGGTTCATGTTGTCATGGCAATGACGCTCCAACGCCTCCATGGTGCGCTCCATTGTCAGCTCGTCTACAGGCCCCTCCCCTGGGGAATGACGTAACAGTTAGACAAAAAgttagacatagagacagaataACAGTTGGCTCGTCCCCGGGACCCTCCCCTGAGAGACACAATAACAGTTGGCTCGTCCCCGGGACCCTCCCCTGAGAGACACAATAACAGCTGGCTTGTCTCCAGGACCCTCCCCTGAGAGACACAATAACAGTTGGCTCGTCTCCGGGACCCTCCCGTGAGAGACACAATAACAGCTGACTCGTCTCCGGGACCATCccgtgagagacagaataacagtTGGCTCGTCCCCGGGACCCTCCcctgagagacagaataacatgtGTGAAGCCTGTCCCCTGGAAGGCGGAGGTGTGAAGCCTGTCCCCTGGAAGGCGGAGGTGTGAAGCCTGTCCCCTGGAAGGCAGAGGTGTGAAGCCCGTCCCATGGAAGGCGGAGGTGTGAAGCCCGTCCCCTGGAAGGCGGAGGTGTGAAGCCCGTCCCCTGGAAGGCGG
>TU522759
GAACACAGATGTTACATTTGTCACAGAAGACCATGTCGTTGCCCTCCTCGCTGTCGGGGGAGCGACACACGTCACAGATGACATCCTCGTCGTACTCGATGCCCAGCCCTTCTACCGTGTCGATGGCGTGGTTCATGTTGTCATGGCAATGACGCTCCAACGCCTCCATGGTGCGCTCCATTGTCAGCTCGTCTACAGGCCCCTCCCCTGGGGAATGACGTAACAGTTAGACAAAAAgttagacatagagacagaataACAGTTGGCTCGTCCCCGGGACCCTCCCCTGAGAGACACAATAACAGTTGGCTCGTCCCCGGGACCCTCCCCTGAGAGACACAATAACAGCTGGCTTGTCTCCAGGACCCTCCCCTGAGAGACACAATAACAGTTGGCTCGTCTCCGGGACCCTCCCGTGAGAGACACAATAACAGCTGACTCGTCTCCGGGACCATCccgtgagagacagaataacagtTGGCTCGTCCCCGGGACCCTCCcctgagagacagaataacatgtGTGAAGCCTGTCCCCTGGAAGGCGGAGGTGTGAAGCCTGTCCCCTGGAAGGCGGAGGTGTGAAGCCTGTCCCCTGGAAGGCAGAGGTGTGAAGCCCGTCCCCTGGAAAGGCGGAGGTGTGAAGCCCGTCCCCTGGAAAGGCGGAGGTGTGAAGCCCGTCCCCTGGAAAGGCGGAGGTGTGAAGCCCGTCCCCTGGAAGGCGGAGGTGTGAAGCCCGTCCCCTGGAAGGCGGAGGTGTG
>TU522760
GAACACAGATGTTACATTTGTCACAGAAGACCATGTCGTTGCCCTCCTCGCTGTCGGGGGAGCGACACACGTCACAGATGACATCCTCGTCGTACTCGATGCCCAGCCCTTCTACCGTGTCGATGGCGTGGTTCATGTTGTCATGGCAATGACGCTCCAACGCCTCCATGGTGCGCTCCATTGTCAGCTCGTCTACAGGCCCCTCCCCTGGGGAATGACGTAACAGTTAGACAAAAAgttagacatagagacagaataACAGTTGGCTCGTCCCCGGGACCCTCCCCTGAGAGACACAATAACAGTTGGCTCGTCCCCGGGACCCTCCCCTGAGAGACACAATAACAGCTGGCTTGTCTCCAGGACCCTCCCCTGAGAGACACAATAACAGTTGGCTCGTCTCCGGGACCCTCCCGTGAGAGACACAATAACAGCTGACTCGTCTCCGGGACCATCccgtgagagacagaataacagtTGGCTCGTCCCCGGGACCCTCCcctgagagacagaataacatgtGTGAAGCCTGTCCCCTGGAAGGCGGAGGTGTGAAGCCTGTCCCCTGGAAGGCGGAGGTGTGAAGCCTGTCCCCTGGAAGGCAGAGGTGTGAAGCCCGTCCCCCTGCCCCttgtctgtgattggtcaacagtactactccTAGTAGGTGTGGGCACTATGGATGGGTTTTCTTGAATTCATTGTTTGTCGTCATTCAAAAAGCAAATAGTAGTTTTCACTTGAAAAATACTTGACCAAATCTTTAATGTAAAATATAATGAATATGACCTCCTACGCAGAAAAGTCCAAATTCATTACAGATGTATTCATCGTAGATTAATTTGGACTATTGAGGAAGTAGTATATTGTCTGTGTTGCTGCTACGGCatctcaagagggacaaacagtAACATTTTATCTTGTTATTCAAGTGAAGGTCTTTTGAGGGAGTATACGAACACAGACATTCACGTCGCCTAGCAGAGTTCTGCTGGGAGAAAACCGAACCTACGCAAGTATGTGGATGTGTTCCTAACCCATGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATGTGTCCTAGCTCAGCAATGTGTTCCTAACCCATGTGTCCTAGCTCAGCAATGTGTTCCTAACCCACGTGTCCTAGCTCAGCAATGTGTTCCTAACCCATGTGTCCTAGCTCAGCAATGTGTTCCTAACCCATGTGTCCTAGCTCAGGAATGTGTTCCTAACCCATGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATATGTCCTAGCTCAGCGTTGTGTTCCTAACCCATGTGTCCCAGCTCAGCATTGACTCCTTACCCATGTGTTCCAGCTCAGCGTTGAGTCCTTACCCATGTGTCCCAGCTCAGCGTTGTGTTCCTTACCCATGTGTCCCAGCTCAGCGTTGAGTGCCTGCAGCCAGTAGAGGTCCATGTTATCCAGGTCATAAGAGCACATGGCCTCAGCCAGCTCCTTGATGTTAACGTAACCCGTCTCTGTAGAGGCCTGGCTCCAACACTGGATATACCTCTTCTGTAGGGTGAACACCGTCTCCTTAGGCTTCTCC
>TU522757
atctcaagagggacaaacagtAACATTTTATCTTGTTATTCAAGTGAAGGTCTTTTGAGGGAGTATACGAACACAGACATTCACGTCGCCTAGCAGAGTTCTGCTGGGAGAAAACCGAACCTACGCAAGTATGTGGATGTGTTCCTAACCCATGTGTCCTAGCTCAGCAATGTGTTCCTAACCCATGTGTCCTAGCTCAGCAATGTGTTCCTAACCCATGTGTCCTAGCTCAGCAATGTGTTCCTAACCCACGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATGTGTCCTAGCTCAGCAATGTGTTCCTAACCCATGTGTCCTTGCTCAGCAATGTGTTCCTTACCCATGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATGTGTCCTAGCTCAGCAATGTGTTCCTAACCCATGTGTCCTAGCTCAGCAATGTGTTCCTAACCCACGTGTCCTAGCTCAGCAATGTGTTCCTAACCCATGTGTCCTAGCTCAGCAATGTGTTCCTAACACGTGTCCTAGCTCAGCAATGTGTTCCTAACACGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATGTGTCCTAGCTCAGCAATGTGTTCATTACCCATGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATGTGTCCTAGCTCAGGAATGTGTTCCTTACCCATGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATGTGTCCTAGCTCAGCAATGTGTTCCTAACACGTGTCCTAGCTCAGCAATGTGTTCCTAACACGTGTCCTAGCTCAGCAATGTGTTCCTAACACACGTGTCCTAGCTCAGCAATGTGTTCCTAGCACATGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATGTGTCCTAGCTCAGGAATGTGTTCCTAACCCATGTGTCCTAGCTCAGCAATGTGTTCCTTACCCATATGTCCTAGCTCAGCGTTGTGTTCCTAACCCATGTGTTCCAGCTCAGCGTTGAGTTCTTACCCATGTGTTCCAGCTCAGCGTTGAGTCCTTACCCATGTGTCCCAGCTCAGCGTTGTGTTCCTTACCCATGTGTCCCAGCTCAGCGTTGAGTGCCTGCAGCCAGTAGAGGTCCATGTTATCCAGGTCATAAGAGCACATGGCCTCAGCCAGCTCCTTGATGTTAACGTAACCCGTCTCTGTAGAGGCCTGGCTCCAACACTGGATATACCTCTTCTGTAGGGTGAACACCGTCTCCTTAGGCTTCTCC

Function

symbol description
jade3 Predicted to enable metal ion binding activity. Predicted to be involved in histone H3 acetylation; histone H4-K5 acetylation; and histone H4-K8 acetylation. Predicted to be part of histone acetyltransferase complex. Orthologous to human JADE3 (jade family PHD finger 3).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU522758 False 692 lncRNA 0.58 2 97812808 97813967
TU522759 False 760 lncRNA 0.59 2 97812808 97813597
TU522760 False 1646 lncRNA 0.50 5 97812808 97815973
TU522757 True 1509 TUCP 0.49 2 97814367 97815973

Neighbor

gene id symbol gene type direction distance location
gtpbp6 gtpbp6 coding upstream 57653 97715395 ~ 97755155 (+)
LOC110524914 tomm70 coding upstream 104802 97677327 ~ 97708006 (+)
LOC110510444 NA coding upstream 244216 97290197 ~ 97568592 (+)
LOC110524865 NA coding upstream 645853 97164039 ~ 97166955 (+)
LOC110524859 inpp5d coding upstream 669125 97098550 ~ 97143683 (+)
LOC110524889 LOC106590724 coding downstream 72406 97888379 ~ 97967920 (+)
LOC118964703 NA coding downstream 144531 97960504 ~ 97962293 (+)
herc2 herc2 coding downstream 181452 97997425 ~ 98248889 (+)
oca2 LOC106591054 coding downstream 460709 98276682 ~ 98442265 (+)
LOC110523047 LOC106560665 coding downstream 1245404 99061377 ~ 99101070 (+)
G461126 NA non-coding upstream 4263 97806820 ~ 97808545 (+)
G461118 NA non-coding upstream 13003 97799208 ~ 97799805 (+)
G461113 NA non-coding upstream 27235 97785359 ~ 97785573 (+)
G461096 NA non-coding upstream 64123 97747972 ~ 97748685 (+)
G461129 NA non-coding downstream 4202 97820175 ~ 97820512 (+)
G461131 NA non-coding downstream 9419 97825392 ~ 97826361 (+)
G461120 NA non-coding downstream 29265 97845238 ~ 97848132 (+)
G461159 NA non-coding downstream 67111 97883084 ~ 97883335 (+)
G461170 NA non-coding downstream 91967 97907940 ~ 97910091 (+)
G460428 NA other upstream 889996 96922332 ~ 96922812 (+)
ryk LOC106560633 other upstream 1280754 96474920 ~ 96619822 (+)
G459843 NA other upstream 1564846 96247286 ~ 96247962 (+)
G459346 hdlbp other upstream 2106289 95696263 ~ 95706519 (+)
G458015 NA other upstream 3676539 94135918 ~ 94136269 (+)
G461826 NA other downstream 858283 98674256 ~ 98677063 (+)
G461827 NA other downstream 859159 98675132 ~ 98675999 (+)
G461999 NA other downstream 958509 98774482 ~ 98779067 (+)
G462037 NA other downstream 1016484 98832457 ~ 98834433 (+)
G462233 NA other downstream 1242910 99058883 ~ 99059354 (+)

Expression


Co-expression Network