Gene
RNA
| Item | Value |
|---|---|
| gene id | G461217 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 98082818 ~ 98084105 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU522870 | False | 386 | lncRNA | 0.41 | 2 | 98082818 | 98083295 |
| TU522871 | True | 313 | lncRNA | 0.42 | 2 | 98082818 | 98084105 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524889 | LOC106590724 | coding | upstream | 114898 | 97888379 ~ 97967920 (+) |
| LOC118964703 | NA | coding | upstream | 120525 | 97960504 ~ 97962293 (+) |
| gtpbp6 | gtpbp6 | coding | upstream | 327663 | 97715395 ~ 97755155 (+) |
| LOC110524914 | tomm70 | coding | upstream | 374812 | 97677327 ~ 97708006 (+) |
| LOC110510444 | NA | coding | upstream | 514226 | 97290197 ~ 97568592 (+) |
| oca2 | LOC106591054 | coding | downstream | 192577 | 98276682 ~ 98442265 (+) |
| LOC110523047 | LOC106560665 | coding | downstream | 977272 | 99061377 ~ 99101070 (+) |
| LOC110524867 | bivm | coding | downstream | 1075801 | 99159906 ~ 99178822 (+) |
| LOC110523045 | NA | coding | downstream | 1112235 | 99196283 ~ 99207807 (+) |
| LOC110490602 | LOC106560622 | coding | downstream | 1290050 | 99374155 ~ 99401558 (+) |
| G461209 | NA | non-coding | upstream | 28595 | 98044421 ~ 98054223 (+) |
| G461210 | NA | non-coding | upstream | 32493 | 98048488 ~ 98050325 (+) |
| G461208 | NA | non-coding | upstream | 37752 | 98043216 ~ 98045066 (+) |
| G461204 | NA | non-coding | upstream | 52581 | 98029811 ~ 98030237 (+) |
| G461202 | NA | non-coding | upstream | 59290 | 98022955 ~ 98023528 (+) |
| G461087 | NA | non-coding | downstream | 9651 | 98093756 ~ 98094496 (+) |
| G461219 | NA | non-coding | downstream | 26252 | 98110357 ~ 98110886 (+) |
| G461220 | NA | non-coding | downstream | 35111 | 98119216 ~ 98122093 (+) |
| G461221 | NA | non-coding | downstream | 40521 | 98124626 ~ 98124939 (+) |
| G461224 | NA | non-coding | downstream | 45543 | 98129648 ~ 98144054 (+) |
| G461121 | jade3 | other | upstream | 266845 | 97812808 ~ 97815973 (+) |
| G460428 | NA | other | upstream | 1160006 | 96922332 ~ 96922812 (+) |
| ryk | LOC106560633 | other | upstream | 1550764 | 96474920 ~ 96619822 (+) |
| G459843 | NA | other | upstream | 1834856 | 96247286 ~ 96247962 (+) |
| G459346 | hdlbp | other | upstream | 2376299 | 95696263 ~ 95706519 (+) |
| G461826 | NA | other | downstream | 590151 | 98674256 ~ 98677063 (+) |
| G461827 | NA | other | downstream | 591027 | 98675132 ~ 98675999 (+) |
| G461999 | NA | other | downstream | 690377 | 98774482 ~ 98779067 (+) |
| G462037 | NA | other | downstream | 748352 | 98832457 ~ 98834433 (+) |
| G462233 | NA | other | downstream | 974778 | 99058883 ~ 99059354 (+) |
