G461219


Basic Information

Item Value
gene id G461219
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 98110357 ~ 98110886 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU522873
GTTCTAACGTCCATCCTCATGTGGACTTTACTCTTCTTTATGAAAACACCTGCATCGTAGAAATTATCACCGtataaatgttctctctctctctgtccctctctctgtccctctctctgtccctctctctgtccctctctctctgtccctgtctgtatgtctgtctctctctgtccctctctctgtccctctctctgtccctctctctctgtcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU522873 True 214 lncRNA 0.49 2 98110357 98110886

Neighbor

gene id symbol gene type direction distance location
LOC110524889 LOC106590724 coding upstream 142437 97888379 ~ 97967920 (+)
LOC118964703 NA coding upstream 148064 97960504 ~ 97962293 (+)
gtpbp6 gtpbp6 coding upstream 355202 97715395 ~ 97755155 (+)
LOC110524914 tomm70 coding upstream 402351 97677327 ~ 97708006 (+)
LOC110510444 NA coding upstream 541765 97290197 ~ 97568592 (+)
oca2 LOC106591054 coding downstream 165796 98276682 ~ 98442265 (+)
LOC110523047 LOC106560665 coding downstream 950491 99061377 ~ 99101070 (+)
LOC110524867 bivm coding downstream 1049020 99159906 ~ 99178822 (+)
LOC110523045 NA coding downstream 1085454 99196283 ~ 99207807 (+)
LOC110490602 LOC106560622 coding downstream 1263269 99374155 ~ 99401558 (+)
G461087 NA non-coding upstream 15861 98093756 ~ 98094496 (+)
G461217 NA non-coding upstream 26252 98082818 ~ 98084105 (+)
G461209 NA non-coding upstream 56134 98044421 ~ 98054223 (+)
G461210 NA non-coding upstream 60032 98048488 ~ 98050325 (+)
G461208 NA non-coding upstream 65291 98043216 ~ 98045066 (+)
G461220 NA non-coding downstream 8330 98119216 ~ 98122093 (+)
G461221 NA non-coding downstream 13740 98124626 ~ 98124939 (+)
G461224 NA non-coding downstream 18762 98129648 ~ 98144054 (+)
G461236 NA non-coding downstream 63455 98174341 ~ 98177386 (+)
G461237 NA non-coding downstream 70862 98181748 ~ 98182891 (+)
G461121 jade3 other upstream 294384 97812808 ~ 97815973 (+)
G460428 NA other upstream 1187545 96922332 ~ 96922812 (+)
ryk LOC106560633 other upstream 1578303 96474920 ~ 96619822 (+)
G459843 NA other upstream 1862395 96247286 ~ 96247962 (+)
G459346 hdlbp other upstream 2403838 95696263 ~ 95706519 (+)
G461826 NA other downstream 563370 98674256 ~ 98677063 (+)
G461827 NA other downstream 564246 98675132 ~ 98675999 (+)
G461999 NA other downstream 663596 98774482 ~ 98779067 (+)
G462037 NA other downstream 721571 98832457 ~ 98834433 (+)
G462233 NA other downstream 947997 99058883 ~ 99059354 (+)

Expression


Co-expression Network