G461221


Basic Information

Item Value
gene id G461221
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 98124626 ~ 98124939 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU522876
ACATACATCCTATAGGTTCTCCACTAAAGGCCTAGGTCCTATAGGTTCTCCACTAAAGAACTAGGTCCTATAGGTTCTCCACTAAAGGCCTAGGTCCTATAGGTTCTCCACTAAAGGACTAGGTCCTATAGGTTCTCCACTAAAGGACTAGGTCCTATAGGTTCTCCGCTAAAGGACTAGGTCCTATAGGTTCTCCACTAAAGGACGAGGTCCTATAGGTTCTCCACTAAAGGACTAGGTCCTATAGGTTCTCCACTAAAGGACTAGGTCCTATAGGTTCTCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU522876 True 285 lncRNA 0.46 2 98124626 98124939

Neighbor

gene id symbol gene type direction distance location
LOC110524889 LOC106590724 coding upstream 156706 97888379 ~ 97967920 (+)
LOC118964703 NA coding upstream 162333 97960504 ~ 97962293 (+)
gtpbp6 gtpbp6 coding upstream 369471 97715395 ~ 97755155 (+)
LOC110524914 tomm70 coding upstream 416620 97677327 ~ 97708006 (+)
LOC110510444 NA coding upstream 556034 97290197 ~ 97568592 (+)
oca2 LOC106591054 coding downstream 151743 98276682 ~ 98442265 (+)
LOC110523047 LOC106560665 coding downstream 936438 99061377 ~ 99101070 (+)
LOC110524867 bivm coding downstream 1034967 99159906 ~ 99178822 (+)
LOC110523045 NA coding downstream 1071401 99196283 ~ 99207807 (+)
LOC110490602 LOC106560622 coding downstream 1249216 99374155 ~ 99401558 (+)
G461220 NA non-coding upstream 2533 98119216 ~ 98122093 (+)
G461084 NA non-coding upstream 13015 97745033 ~ 98111611 (+)
G461219 NA non-coding upstream 13740 98110357 ~ 98110886 (+)
G461087 NA non-coding upstream 30130 98093756 ~ 98094496 (+)
G461217 NA non-coding upstream 40521 98082818 ~ 98084105 (+)
G461224 NA non-coding downstream 4709 98129648 ~ 98144054 (+)
G461236 NA non-coding downstream 49402 98174341 ~ 98177386 (+)
G461237 NA non-coding downstream 56809 98181748 ~ 98182891 (+)
G461244 NA non-coding downstream 74031 98198970 ~ 98204380 (+)
G461248 NA non-coding downstream 90969 98215908 ~ 98216906 (+)
G461121 jade3 other upstream 308653 97812808 ~ 97815973 (+)
G460428 NA other upstream 1201814 96922332 ~ 96922812 (+)
ryk LOC106560633 other upstream 1592572 96474920 ~ 96619822 (+)
G459843 NA other upstream 1876664 96247286 ~ 96247962 (+)
G459346 hdlbp other upstream 2418107 95696263 ~ 95706519 (+)
G461826 NA other downstream 549317 98674256 ~ 98677063 (+)
G461827 NA other downstream 550193 98675132 ~ 98675999 (+)
G461999 NA other downstream 649543 98774482 ~ 98779067 (+)
G462037 NA other downstream 707518 98832457 ~ 98834433 (+)
G462233 NA other downstream 933944 99058883 ~ 99059354 (+)

Expression


Co-expression Network