Gene
RNA
| Item | Value |
|---|---|
| gene id | G461236 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 98174341 ~ 98177386 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU522896 | False | 416 | lncRNA | 0.53 | 2 | 98174341 | 98177386 |
| TU522897 | True | 203 | lncRNA | 0.54 | 2 | 98176976 | 98177386 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524889 | LOC106590724 | coding | upstream | 206421 | 97888379 ~ 97967920 (+) |
| LOC118964703 | NA | coding | upstream | 212048 | 97960504 ~ 97962293 (+) |
| gtpbp6 | gtpbp6 | coding | upstream | 419186 | 97715395 ~ 97755155 (+) |
| LOC110524914 | tomm70 | coding | upstream | 466335 | 97677327 ~ 97708006 (+) |
| LOC110510444 | NA | coding | upstream | 605749 | 97290197 ~ 97568592 (+) |
| oca2 | LOC106591054 | coding | downstream | 99296 | 98276682 ~ 98442265 (+) |
| LOC110523047 | LOC106560665 | coding | downstream | 883991 | 99061377 ~ 99101070 (+) |
| LOC110524867 | bivm | coding | downstream | 982520 | 99159906 ~ 99178822 (+) |
| LOC110523045 | NA | coding | downstream | 1018954 | 99196283 ~ 99207807 (+) |
| LOC110490602 | LOC106560622 | coding | downstream | 1196769 | 99374155 ~ 99401558 (+) |
| G461224 | NA | non-coding | upstream | 30287 | 98129648 ~ 98144054 (+) |
| G461221 | NA | non-coding | upstream | 49402 | 98124626 ~ 98124939 (+) |
| G461220 | NA | non-coding | upstream | 52248 | 98119216 ~ 98122093 (+) |
| G461219 | NA | non-coding | upstream | 63455 | 98110357 ~ 98110886 (+) |
| G461087 | NA | non-coding | upstream | 79845 | 98093756 ~ 98094496 (+) |
| G461237 | NA | non-coding | downstream | 4362 | 98181748 ~ 98182891 (+) |
| G461244 | NA | non-coding | downstream | 21584 | 98198970 ~ 98204380 (+) |
| G461248 | NA | non-coding | downstream | 38522 | 98215908 ~ 98216906 (+) |
| G461251 | NA | non-coding | downstream | 42381 | 98219767 ~ 98220479 (+) |
| G461255 | NA | non-coding | downstream | 48646 | 98226032 ~ 98226616 (+) |
| G461121 | jade3 | other | upstream | 358368 | 97812808 ~ 97815973 (+) |
| G460428 | NA | other | upstream | 1251529 | 96922332 ~ 96922812 (+) |
| ryk | LOC106560633 | other | upstream | 1642287 | 96474920 ~ 96619822 (+) |
| G459843 | NA | other | upstream | 1926379 | 96247286 ~ 96247962 (+) |
| G459346 | hdlbp | other | upstream | 2467822 | 95696263 ~ 95706519 (+) |
| G461826 | NA | other | downstream | 496870 | 98674256 ~ 98677063 (+) |
| G461827 | NA | other | downstream | 497746 | 98675132 ~ 98675999 (+) |
| G461999 | NA | other | downstream | 597096 | 98774482 ~ 98779067 (+) |
| G462037 | NA | other | downstream | 655071 | 98832457 ~ 98834433 (+) |
| G462233 | NA | other | downstream | 881497 | 99058883 ~ 99059354 (+) |
