Gene
RNA
| Item | Value |
|---|---|
| gene id | G461786 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 98577080 ~ 98579126 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: putative uncharacterized protein FLJ45035, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU523661 | True | 249 | lncRNA | 0.39 | 3 | 98577080 | 98579126 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| oca2 | LOC106591054 | coding | upstream | 134815 | 98276682 ~ 98442265 (+) |
| herc2 | herc2 | coding | upstream | 328191 | 97997425 ~ 98248889 (+) |
| LOC110524889 | LOC106590724 | coding | upstream | 609160 | 97888379 ~ 97967920 (+) |
| LOC118964703 | NA | coding | upstream | 614787 | 97960504 ~ 97962293 (+) |
| gtpbp6 | gtpbp6 | coding | upstream | 821925 | 97715395 ~ 97755155 (+) |
| LOC110523047 | LOC106560665 | coding | downstream | 482251 | 99061377 ~ 99101070 (+) |
| LOC110524867 | bivm | coding | downstream | 580780 | 99159906 ~ 99178822 (+) |
| LOC110523045 | NA | coding | downstream | 617214 | 99196283 ~ 99207807 (+) |
| LOC110490602 | LOC106560622 | coding | downstream | 795029 | 99374155 ~ 99401558 (+) |
| LOC118964709 | NA | coding | downstream | 1566477 | 100145603 ~ 100157146 (+) |
| G461725 | NA | non-coding | upstream | 48754 | 98472505 ~ 98528326 (+) |
| G461755 | NA | non-coding | upstream | 55340 | 98520962 ~ 98521740 (+) |
| G461718 | NA | non-coding | upstream | 109785 | 98467064 ~ 98467295 (+) |
| G461271 | NA | non-coding | upstream | 133794 | 98442819 ~ 98443286 (+) |
| G461794 | NA | non-coding | downstream | 25518 | 98604644 ~ 98605338 (+) |
| G461811 | NA | non-coding | downstream | 57151 | 98636277 ~ 98637700 (+) |
| G461826 | NA | non-coding | downstream | 95130 | 98674256 ~ 98677063 (+) |
| G461829 | NA | non-coding | downstream | 100720 | 98679846 ~ 98680682 (+) |
| G461844 | NA | non-coding | downstream | 123392 | 98702518 ~ 98703548 (+) |
| G461121 | jade3 | other | upstream | 761107 | 97812808 ~ 97815973 (+) |
| G460428 | NA | other | upstream | 1654268 | 96922332 ~ 96922812 (+) |
| ryk | LOC106560633 | other | upstream | 2045026 | 96474920 ~ 96619822 (+) |
| G459843 | NA | other | upstream | 2329118 | 96247286 ~ 96247962 (+) |
| G459346 | hdlbp | other | upstream | 2870561 | 95696263 ~ 95706519 (+) |
| G461827 | NA | other | downstream | 96006 | 98675132 ~ 98675999 (+) |
| G461999 | NA | other | downstream | 195356 | 98774482 ~ 98779067 (+) |
| G462037 | NA | other | downstream | 253331 | 98832457 ~ 98834433 (+) |
| G462233 | NA | other | downstream | 479757 | 99058883 ~ 99059354 (+) |
