G461827


Basic Information

Item Value
gene id G461827
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 98675132 ~ 98675999 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU523704
ttcatgtcaggtctactgttacatgtcaggtctactgttacatggcAGgtctactgttacatgtcaggtctactgttacatgtcaggtctacatgtcaggtctactgttacatgtcaggtctactgttacatgtcaggtctactgttacatggcaggcctacatgtcaggtctactgttacatgtcaggtctactgttacatgtcagttctacatgtcaggtctactgcttcatgtcaggtctactgttacatgtcaggtctacatgtcaggtctactgttacatgtcaggtctacatgtcaggtctactgttaaatgtcaggtctactgttacatttcaggtctacatgtcaggtctactgttacatgtcagttctactgttacatgtcaggtctactgttacatttCAGatctacatgtcaggtctactgttacatgtcaggtctacatgtcaggtctactgttaaatgtcaggtctactgttacatttcaggtctacatgtcaggtctactgttacatgtcagttctacatgtcagttctacatgtcaggtc

Function

NR:

description
zinc-binding protein A33-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU523704 True 555 TUCP 0.42 2 98675132 98675999

Neighbor

gene id symbol gene type direction distance location
oca2 LOC106591054 coding upstream 232867 98276682 ~ 98442265 (+)
herc2 herc2 coding upstream 426243 97997425 ~ 98248889 (+)
LOC110524889 LOC106590724 coding upstream 707212 97888379 ~ 97967920 (+)
LOC118964703 NA coding upstream 712839 97960504 ~ 97962293 (+)
gtpbp6 gtpbp6 coding upstream 919977 97715395 ~ 97755155 (+)
LOC110523047 LOC106560665 coding downstream 385378 99061377 ~ 99101070 (+)
LOC110524867 bivm coding downstream 483907 99159906 ~ 99178822 (+)
LOC110523045 NA coding downstream 520341 99196283 ~ 99207807 (+)
LOC110490602 LOC106560622 coding downstream 698156 99374155 ~ 99401558 (+)
LOC118964709 NA coding downstream 1469604 100145603 ~ 100157146 (+)
G461811 NA non-coding upstream 37432 98636277 ~ 98637700 (+)
G461794 NA non-coding upstream 69794 98604644 ~ 98605338 (+)
G461786 NA non-coding upstream 96006 98577080 ~ 98579126 (+)
G461725 NA non-coding upstream 146806 98472505 ~ 98528326 (+)
G461829 NA non-coding downstream 3847 98679846 ~ 98680682 (+)
G461844 NA non-coding downstream 26519 98702518 ~ 98703548 (+)
G461865 NA non-coding downstream 70715 98746714 ~ 98747894 (+)
G461996 NA non-coding downstream 85510 98761509 ~ 98805170 (+)
G461994 NA non-coding downstream 91706 98767705 ~ 98767996 (+)
G461121 jade3 other upstream 859159 97812808 ~ 97815973 (+)
G460428 NA other upstream 1752320 96922332 ~ 96922812 (+)
ryk LOC106560633 other upstream 2143078 96474920 ~ 96619822 (+)
G459843 NA other upstream 2427170 96247286 ~ 96247962 (+)
G459346 hdlbp other upstream 2968613 95696263 ~ 95706519 (+)
G461999 NA other downstream 98483 98774482 ~ 98779067 (+)
G462037 NA other downstream 156458 98832457 ~ 98834433 (+)
G462233 NA other downstream 382884 99058883 ~ 99059354 (+)
G462549 NA other downstream 807384 99483383 ~ 99483960 (+)

Expression


Co-expression Network