G462764


Basic Information

Item Value
gene id G462764
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 99642970 ~ 99655051 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU525056
attataatatgacagaccagctagatctactgtctcaattataataacacagaccagctagatctactgtctctattataatatgacagaccggctagatctactgtctctattataatatgacagaccagatagatctactgtctctattataatatgacagaccagctggatctactgtctctattagaatttgacagaccagctagatctactgtctctattataatatgacagaccagctagttctactgtctctattataatatgacagaccagctggatctactgtctctattataatatgacagaccagctagatctactgtatctattatattatgacagaccagctagatctattgtctctattataatttgacagaccagctagatctactgtttctattatattatgacagaccagctagatcgactgtatttattatcatatgacagaccagctagatctactgtttctattatattatgacagaccagctagagct
>TU525055
gatctactgtctctattatattatgacagatcagctatatatactgtctctattataatatgacagaccagctagatctactgtatctattataatatgacagaccagctagatctactgtatctattataataagacagaccggctagatctattgtctctattataatttgacagaaccatcaagatttactgtctctatgtctctattatattatgacagaccagctagagctactgtctctattgtattatgacagagcagctagatctactgtctctattaaattatgacagaccagctagatctactgtctctattatattatgacagatcagctatatctgctgtctctattacattatgacagagcagctagatctactgtctctattaaattatgacagaccagctagatctactgtctctatcatattatgacagaccagctagatctactgtctctattataatatgacagaccagctagatctactgtctctattgtattatgacatagcagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU525056 False 509 lncRNA 0.35 2 99642970 99650680
TU525055 True 525 lncRNA 0.34 2 99650112 99655051

Neighbor

gene id symbol gene type direction distance location
LOC110490602 LOC106560622 coding upstream 241412 99374155 ~ 99401558 (+)
LOC110523045 NA coding upstream 435163 99196283 ~ 99207807 (+)
LOC110524867 bivm coding upstream 464148 99159906 ~ 99178822 (+)
LOC110523047 LOC106560665 coding upstream 541900 99061377 ~ 99101070 (+)
oca2 LOC106591054 coding upstream 1200705 98276682 ~ 98442265 (+)
LOC118964709 NA coding downstream 490552 100145603 ~ 100157146 (+)
si:ch211-121a2.4 LOC106560711 coding downstream 527876 100182927 ~ 100191165 (+)
LOC110524906 NA coding downstream 569160 100224211 ~ 100226348 (+)
LOC110524909 LOC106921341 coding downstream 765216 100420267 ~ 100449778 (+)
LOC118964711 NA coding downstream 1011096 100666147 ~ 100667320 (+)
G462761 NA non-coding upstream 36439 99606032 ~ 99606531 (+)
G462758 NA non-coding upstream 52063 99590679 ~ 99590907 (+)
G462724 NA non-coding upstream 94930 99547832 ~ 99548040 (+)
G462567 NA non-coding upstream 111881 99530875 ~ 99531089 (+)
G462565 NA non-coding upstream 121071 99518725 ~ 99521899 (+)
G462769 NA non-coding downstream 12882 99667933 ~ 99669694 (+)
G462796 NA non-coding downstream 101155 99756206 ~ 99756976 (+)
G462797 NA non-coding downstream 102047 99757098 ~ 99762119 (+)
G462799 NA non-coding downstream 116905 99771956 ~ 99775934 (+)
G462801 NA non-coding downstream 122414 99777465 ~ 99777993 (+)
G462549 NA other upstream 159010 99483383 ~ 99483960 (+)
G462233 NA other upstream 583616 99058883 ~ 99059354 (+)
G462037 NA other upstream 810059 98832457 ~ 98834433 (+)
G461999 NA other upstream 863903 98774482 ~ 98779067 (+)
G462762 NA other downstream 411518 100050135 ~ 100089049 (+)
G463119 NA other downstream 516086 100171137 ~ 100171897 (+)
G463139 NA other downstream 571453 100226504 ~ 100230232 (+)
G463164 NA other downstream 614510 100269561 ~ 100291594 (+)
G463269 NA other downstream 824570 100479621 ~ 100482754 (+)

Expression


Co-expression Network