G463408


Basic Information

Item Value
gene id G463408
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 100705660 ~ 100706209 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU525884
agggttaggggtcagggttaaggaCCAGTGAgcgggttaggggtcagggttaaggaCCAGTGAgcgggttaggggtcagggtcaAGGACCAGTgagagggttaggggtcagggttaaggaCCAGTGAgcgggttaggggtcagggttaaggaCCAGTGaaagggttaggggtcagggttaaggaCCAGTgagagggttaggggtcagggttaaggaccagtgagagggttaggggtcagggtta
>TU525885
agggttaggggtcagggttaaggaCCAGTGAgcgggttaggggtcagggttaaggaCCAGTGAgcgggttaggggtcagggtcaAGGACCAGTgagagggttaggggtcagggttaaggaCCAGTGAgcgggttaggggtcagggttaaggaCCAGTGaaagggttaggggtcagggttaaggaCCAGTgagagggtcaggggtcagggttaaggaccagtgagagggttaggggtcagggttaagga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU525884 False 244 lncRNA 0.57 2 100705660 100706209
TU525885 True 248 lncRNA 0.58 2 100705660 100706149

Neighbor

gene id symbol gene type direction distance location
LOC118964711 NA coding upstream 38340 100666147 ~ 100667320 (+)
LOC110524909 LOC106921341 coding upstream 255882 100420267 ~ 100449778 (+)
LOC110524906 NA coding upstream 479312 100224211 ~ 100226348 (+)
si:ch211-121a2.4 LOC106560711 coding upstream 514495 100182927 ~ 100191165 (+)
LOC118964709 NA coding upstream 548514 100145603 ~ 100157146 (+)
G463404 chd1l non-coding upstream 7027 100694327 ~ 100698633 (+)
G463350 NA non-coding upstream 92916 100611666 ~ 100612744 (+)
G463346 NA non-coding upstream 97061 100600669 ~ 100608599 (+)
G463348 NA non-coding upstream 98964 100604287 ~ 100606696 (+)
G463344 NA non-coding upstream 106954 100597603 ~ 100598706 (+)
G463422 NA non-coding downstream 32109 100738318 ~ 100757844 (+)
G463423 NA non-coding downstream 62160 100768369 ~ 100775358 (+)
G463426 NA non-coding downstream 67647 100773856 ~ 100779014 (+)
G463269 NA other upstream 222906 100479621 ~ 100482754 (+)
G463164 NA other upstream 414066 100269561 ~ 100291594 (+)
G463139 NA other upstream 475487 100226504 ~ 100230232 (+)
G463119 NA other upstream 533763 100171137 ~ 100171897 (+)
G462762 NA other upstream 619656 100050135 ~ 100089049 (+)

Expression


Co-expression Network