mtmr12 (mtmr12)


Basic Information

Item Value
gene id mtmr12
gene name mtmr12
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 2410231 ~ 2446470 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036979210.1
ATGCGGATGTTCGATGGGCGGGTTCTGTTAAAGCAGGTTATTCTTCTGTTTTGGCCCCTTATTTCCACCTGGGTTCAGGGGGCAGAGAAAATAGATAGTTGTCAACTACAAGTTCTAGAAATGTTGAGTAGTTTAGGGAGCGTTGGTGGGAAGTCTGCCAAACCTTCGTTTGTTTCTTATGTGACGCCCGAGGAAATCAAGTCAGAGAAGGAACCTTCCAGAAAAGAGAAACATCCAGACTTGTTACCAGGTGAGGTAGTGTTCTGCAGTGCCAGCACAGTGTTGAAATACACTCAGGATGACCTGTCACAGCGAGGCGTCTTCGGGGCGCTGCTCTGCACCAACTTCAGAGTGTCCTTTGTCAGCGACGAGGCGCCCACTGAGGAGATGGGCCAGCTCTTCAAAAATAAACTCTACGGAGAAAACGACATCCCTCTTTCGTGTGTGGATAACATCTATGGAGGTTCTGAAGACAAGAGGAAGCTGATAACAGGAGGCCTGGTGAAGAACAAGTATCCATCAAAGATTATCATCCATTGTAAAGACCTACGGGTGTTTCagttctctctgtccttctctaaAGAGGAAGATGCCAAAAAGATCTTCCAAGGGATTGTCCACCACTGTCTGGAGCCCAAGTCCCTGAGATGTCTCTTTGCCTTCTCCTACTGCGAGAACACCTCGTATCCAGAGGCGCAGAGGAAAAAGCAGACTGTGATGTTTGACTCCGTGGAGGACTGGACTCAAGACATGAAGAGAACTAAAGGAAACTGTAGAGTGGTGTCGGAGAACAGCAACTTCGAGCTCTCTCCAAAGTTGCCTCAGTATTTTATAGTCCCAACAAACGTCTCGGACGAAGACTTGACTAAGTACCAGGGAAAGGGATTACCGATGTGGTGCTGGTCTCATCATAGCGGCTGTGCCTTGTTTAAAACCGCCTCAATACCCCTGGTACAAGAGGACAACGTCCCACAAACCTACATGGAGAAAATGTTGACGGCGGTGGCTCACAACCACCTGTACTCCGTAAAGACAGAAGACCTGTCCGACACACTGCCGACCGTTCAGGACATCCTGTTGTCTTACAACAAATTCAAACAGTTCTTCCTGATCGACAATACAACAGAGTTCTGGATGTCCGATATGAAATGGTTCTCCTCACTGGACAACTGTGGATGGCTGGACATCATCAGACAGTGTCTCCAGAAGGCCGTGGAGGTAGTTGAGAGCCTGGAAAAGGAAAACACCAATGTTCTCATTATGGAGGAGGGCGGTTCAGACCTGTGCTGTGTGGTCTCCAGCCTGGTCCAGTTGATGTTGGACCCCTACTACAGAACTCTTCTGGGCTTCCAGAGTCTGGTACAGAAGGAGTGGGTAGCAGGAGGACATGCTTTCCTGGATCGCTCCAACCATCTACACCTCAAGGACAAGGTGGAGAGCCAGTCTCCAGTGTTCCTGCTCTTCCTGGAGTGTGTGTGGCAGCTACAGCAGCAGCATGGTCCGGCCTTCCAGTTCTCAGAGACCTACCTGACCGTGCTGTCTGACAGCGTCCATGTTCCGGTCTTCACCACCTTCCTCTTTAACAACGACAGCCACAGAGACAGCTTACTCAGGGCCGAGTCGCCCCACACACAAAGAAGCCCATTGAACTGCCCTACAGTGTGGGACTGGTCGGTGCAGTTTGACTGCAAGGCACAGGATCTCTTCACTAACCCTTTGTATACTGAGAAGCCCAAGCAGGACACGTCTGTGAGGAAATCATACAGGCCCAggCACCTGCGTCAGCTGTCCCTGCCAAGCTCAGCCTTCAAGACCCCCCCTAAGAAGGGCTTCTTTAAAGACGAGGCGGACAACCTGAAGAAAATCCTCGGCGTAAAGAGGCTCAGTCGCTGGATGCTGTCTCCTTCCTCAGATTCCCCTCAGACCTCGTCTTCAGTCAGGGAGTTCTACGAGGCGTGGCAGACTAAACCATTGGACTACCACGGTCTGCTGCTGCCCTGCCTGGACGGTCCCTCCATACGCGTCTGGATGCAGAGGTACCTGCGCTGGATCCACGACGTCCAGATCCTAGGAGGGGGTCCAGTGGCCATGCTGAGTAAAGTCTCTGAGATACTGGGGGAGGTTCAGGAGCTGCAGAGACAGCTTGATCGCCACGGCTGCACTTTAACCTCCAACCACAAGGGGGCGAGGCCAAGGGCCAAGACAGCGGCGGCGGTGATCGCAGCCAGGTCTTCGGTGAGGCTGTCGTCGTCGTTCCCCTTCGTGACGTCGAGGAACTGGTCGTTCAAACCGGCCATACCGACCAGCCTGCTTCAGAGTCTCATGGTGACCGGGATACCAGGAAACCTGGCCGATAGAGAGGATGATGGTGGCCCGGAGTCTCTGGTCTAGGATACACACAGTCCCCCTGTCTATCACAAACCCAATGGGGAGGTTTGGTTGGAGGCCTGTTACTGTACCTACGTACACTGGGACCTAAAGTGTTGGACCTGTCATGGTGCTCACTGCTCAAAGCCATCGTTGACAGGATCATCATTTTCCTGCTTTAGACAGAGAAGGCCAAAGCTATATATCCTAATACCATTTGTGCACTACTGTGGCGAGCAAAATTTTTTTTAACCGGTTGCTTACAAACAAAACTGTGACTGTATATGTCCCGTCTCTTGCTTAAAGGAAATGGCATCTTTAAAGAATTCCTAATTATCCATAGTTGACTACTGTCCTGTTAAGAACCATAGAGCTGTCCGGTCTAAAATACATAACTACTGTAAAGCACTGAATAATGAATTACCATTTGTATGCTctttttttaattaaataaaaaatgctaGTCTCTC

Function

symbol description
mtmr12 Predicted to enable phosphatase regulator activity. Acts upstream of or within locomotory behavior and skeletal muscle fiber development. Predicted to be located in sarcomere and sarcoplasmic reticulum. Orthologous to human MTMR12 (myotubularin related protein 12).

NR:

description
myotubularin-related protein 12

GO:

id name namespace
GO:0048741 skeletal muscle fiber development biological_process
GO:0007626 locomotory behavior biological_process

KEGG:

id description
K18085 MTMR10_11_12; myotubularin-related protein 10/11/12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036979210.1 True 2837 mRNA 0.50 16 2410231 2446470

Neighbor

gene id symbol gene type direction distance location
zfr zfr coding upstream 970 2342330 ~ 2451362 (+)
LOC110525063 LOC106570939 coding upstream 210337 2149240 ~ 2199894 (+)
LOC110525062 LOC106570947 coding upstream 305090 2002088 ~ 2105141 (+)
slc4a4a LOC101484802 coding upstream 1291642 775664 ~ 1118589 (+)
LOC118964805 NA coding upstream 1407943 997029 ~ 1002288 (+)
LOC110525158 LOC106570936 coding downstream 20004 2466474 ~ 2489239 (+)
pdzd2 pdzd2 coding downstream 106741 2553211 ~ 2714300 (+)
LOC110516346 NA coding downstream 277295 2723765 ~ 2724931 (+)
LOC110525071 LOC106585963 coding downstream 297494 2743964 ~ 2866482 (+)
isl1 isl1 coding downstream 638211 3084681 ~ 3092690 (+)
G465354 NA non-coding upstream 7185 2401504 ~ 2403046 (+)
G465318 NA non-coding upstream 87550 2322438 ~ 2322681 (+)
G465316 NA non-coding upstream 92502 2317355 ~ 2317729 (+)
G465315 NA non-coding upstream 92912 2316947 ~ 2317319 (+)
G465314 NA non-coding upstream 107968 2301980 ~ 2302263 (+)
G465358 NA non-coding downstream 2182 2448652 ~ 2760109 (+)
G465378 NA non-coding downstream 29498 2475968 ~ 2480509 (+)
G465394 NA non-coding downstream 72340 2518810 ~ 2520811 (+)
G465451 NA non-coding downstream 200791 2647261 ~ 2649273 (+)
G465454 NA non-coding downstream 210271 2656741 ~ 2657202 (+)
G465355 NA other upstream 4141 2405119 ~ 2406090 (+)
G465203 NA other upstream 346164 2062328 ~ 2064067 (+)
G464705 NA other upstream 1181132 1228705 ~ 1229099 (+)
LOC110525138 rufy3 other upstream 1951225 442716 ~ 549899 (+)
G465578 NA other downstream 532372 2978842 ~ 2982425 (+)
G466813 NA other downstream 1326394 3772864 ~ 3773340 (+)
G468732 NA other downstream 3661909 6108379 ~ 6156681 (+)
G468643 LOC106607869 other downstream 3748302 6194772 ~ 6199155 (+)

Expression


Co-expression Network