Item | Value |
---|---|
gene id | isl1 |
gene name | isl1 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 3084681 ~ 3092690 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
isl1 | Enables DNA-binding transcription factor activity, RNA polymerase II-specific; DNA-binding transcription factor binding activity; and cis-regulatory region sequence-specific DNA binding activity. Involved in cardiac cell fate determination; positive regulation of transcription by RNA polymerase II; and secondary heart field specification. Predicted to be part of chromatin. Predicted to be active in nucleus. Implicated in type 1 diabetes mellitus and type 2 diabetes mellitus. |
description |
---|
PREDICTED: insulin gene enhancer protein ISL-1 isoform X1 |
id | name | namespace |
---|---|---|
GO:0021522 | spinal cord motor neuron differentiation | biological_process |
GO:0006355 | regulation of transcription, DNA-templated | biological_process |
GO:0055011 | atrial cardiac muscle cell differentiation | biological_process |
GO:0055012 | ventricular cardiac muscle cell differentiation | biological_process |
GO:0031017 | exocrine pancreas development | biological_process |
GO:0008016 | regulation of heart contraction | biological_process |
GO:0048665 | neuron fate specification | biological_process |
GO:0048936 | peripheral nervous system neuron axonogenesis | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0043565 | sequence-specific DNA binding | molecular_function |
GO:0003700 | DNA-binding transcription factor activity | molecular_function |
GO:0008270 | zinc ion binding | molecular_function |
id | description |
---|---|
K09370 | ISL1; insulin gene enhancer protein ISL-1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036979218.1 | False | 2722 | mRNA | 0.47 | 6 | 3084681 | 3092690 |
XM_036979217.1 | False | 2707 | mRNA | 0.47 | 6 | 3084697 | 3092688 |
XM_036979220.1 | False | 2677 | mRNA | 0.47 | 6 | 3084702 | 3092687 |
XM_036979219.1 | True | 2671 | mRNA | 0.47 | 6 | 3084709 | 3092685 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110525071 | LOC106585963 | coding | upstream | 218199 | 2743964 ~ 2866482 (+) |
LOC110516346 | NA | coding | upstream | 359750 | 2723765 ~ 2724931 (+) |
pdzd2 | pdzd2 | coding | upstream | 370381 | 2553211 ~ 2714300 (+) |
LOC110525158 | LOC106570936 | coding | upstream | 595442 | 2466474 ~ 2489239 (+) |
mtmr12 | mtmr12 | coding | upstream | 638211 | 2410231 ~ 2446470 (+) |
fst | fst | coding | downstream | 370979 | 3463669 ~ 3491741 (+) |
LOC118964791 | NA | coding | downstream | 447676 | 3540366 ~ 3542885 (+) |
hspb3 | hspb3 | coding | downstream | 725348 | 3818038 ~ 3823330 (+) |
LOC110513046 | snx18 | coding | downstream | 734480 | 3827170 ~ 3866575 (+) |
LOC110525164 | LOC106585954 | coding | downstream | 903443 | 3996133 ~ 4032894 (+) |
G466259 | NA | non-coding | upstream | 36742 | 3047292 ~ 3047939 (+) |
G466258 | NA | non-coding | upstream | 37568 | 3046895 ~ 3047113 (+) |
G466239 | NA | non-coding | upstream | 72315 | 3012071 ~ 3012366 (+) |
G466212 | NA | non-coding | upstream | 94800 | 2989077 ~ 2989881 (+) |
G465539 | NA | non-coding | upstream | 100291 | 2842347 ~ 2984390 (+) |
G466302 | NA | non-coding | downstream | 24210 | 3116900 ~ 3117150 (+) |
G466357 | NA | non-coding | downstream | 93653 | 3186343 ~ 3188741 (+) |
G466358 | NA | non-coding | downstream | 96219 | 3188909 ~ 3189108 (+) |
G466375 | NA | non-coding | downstream | 162384 | 3255074 ~ 3256675 (+) |
G466377 | NA | non-coding | downstream | 164120 | 3256810 ~ 3367123 (+) |
G465578 | NA | other | upstream | 102256 | 2978842 ~ 2982425 (+) |
zfr | zfr | other | upstream | 675423 | 2342330 ~ 2451362 (+) |
G465355 | NA | other | upstream | 678591 | 2405119 ~ 2406090 (+) |
G465203 | NA | other | upstream | 1020614 | 2062328 ~ 2064067 (+) |
G466813 | NA | other | downstream | 680174 | 3772864 ~ 3773340 (+) |
G468732 | NA | other | downstream | 3015689 | 6108379 ~ 6156681 (+) |
G468643 | LOC106607869 | other | downstream | 3102082 | 6194772 ~ 6199155 (+) |
G468755 | NA | other | downstream | 3117509 | 6210199 ~ 6244501 (+) |
G468768 | NA | other | downstream | 3161786 | 6254476 ~ 6371873 (+) |