LOC110525174 (gpx8)


Basic Information

Item Value
gene id LOC110525174
gene name gpx8
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 4790838 ~ 4792423 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605124.2
CCATAGTGAAATGTGATGCCTAACACAGAACAGACCTCCTCCAAAGCCCGTTGGCTCCTCACTTCGCTATGCGCCCGTCCAGCCAGCCAGACTCAACCCAGCAGCGGTTCACTAACTCCTTCCCCCGCCCCAAGCTCTCATTGTTCCCCCTCCAAGATGGAGGCGCTGGAGGTTTTGGGGGGCTACCCGACCAAGCCCTCGAACCCTCGATCACGAATGGTCAGGGTTCTACTGAGTATGACTGTTGTTATGGGATGTTTATTAACGCTACATAGTTTTCTCAAAATCACTAAGTCGCGGAAGCCGCAAGATTTCTACTCTTTTGAGGTGAAGGACGCCAAAGGGAGAAGCGTTTCTCTGGAGAGATACAGAGGCAAAGCGTCTCTGGTTGTCAACGTGGCGAGCCACAGCGAACACACAGAGAATAACTATCGCTCTCTGCAAGAGCTGCACCGGGAACTGGGGACGTCCCATTTCAACGTGCTGGCTTTTCCCTGCGGCCAGTTCGGGGAGACCGAGATGGGGACCAGCCGGGACATCGAGGCCAACGCCAAGAACACCCATGGCGTCACCTTCCCTATTTTCAGTAAGATCAAAATCATGGGATCGGAGGCGGAGCCAGCTTTCAAATTCATAACAGATTCTGTAAAAAAGATTCCGAAGTGGAACTTCTGGAAGTTCCTGGTGAACCCTGAGGGCCAGGTGGTGAGGTACTGGAAGGCAGAGGAGCCCGTCGACAGCGTTCGTCAGGAGGCCACGGCCATGGTGCGCGAGATCATTCTGAAGAAAAGGGCAGAGCTCTAACAGCGTGGAACTTGTCAAGACAGGAGTGACTACACCTCTTGAGTTCGATTGAACGTTCCTGGGGTACTGTGCGACGGACGAACATTTCAACACACTTTATTATGATTTGACCACTTTGACAAACTTTGCAGAAGATCATGTTCATTGCACTGTAGGTGGgtttagtattttactggatggcAACAGGACTAcaataagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

symbol description
gpx8 Predicted to enable peroxidase activity. Predicted to act upstream of or within response to oxidative stress. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in notochord; otic vesicle; and pharyngeal arch 3-7 skeleton. Orthologous to human GPX8 (glutathione peroxidase 8 (putative)).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K00432 gpx, btuE, bsaA; glutathione peroxidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605124.2 True 1095 mRNA 0.52 3 4790838 4792423

Neighbor

gene id symbol gene type direction distance location
LOC110525169 LOC106585939 coding upstream 139967 4643954 ~ 4650871 (+)
LOC118964808 NA coding upstream 196648 4592804 ~ 4594190 (+)
LOC110525072 LOC106585937 coding upstream 207478 4447482 ~ 4583360 (+)
LOC110511702 LOC106585945 coding upstream 465156 4143188 ~ 4325682 (+)
LOC110525166 LOC106585946 coding upstream 513333 4258161 ~ 4277505 (+)
bmp2k LOC106585926 coding downstream 50452 4842875 ~ 4935449 (+)
LOC118964809 NA coding downstream 122443 4914866 ~ 4918091 (+)
prdm8b LOC106585925 coding downstream 787351 5579774 ~ 5585518 (+)
LOC118965066 LOC106585924 coding downstream 830677 5623100 ~ 5624315 (+)
LOC118964810 LOC106585924 coding downstream 864845 5657268 ~ 5658483 (+)
G467733 NA non-coding upstream 75437 4713374 ~ 4715401 (+)
G467713 NA non-coding upstream 93355 4697245 ~ 4697483 (+)
G467705 NA non-coding upstream 100187 4690443 ~ 4690651 (+)
G467700 NA non-coding upstream 109943 4680689 ~ 4680895 (+)
G467643 NA non-coding upstream 158706 4631562 ~ 4632132 (+)
G467819 NA non-coding downstream 96964 4889387 ~ 4892909 (+)
G467823 NA non-coding downstream 116137 4908560 ~ 4908889 (+)
G467828 NA non-coding downstream 131001 4923424 ~ 4924952 (+)
G467834 NA non-coding downstream 149953 4942376 ~ 4942599 (+)
G466813 NA other upstream 1017498 3772864 ~ 3773340 (+)
G465578 NA other upstream 1808413 2978842 ~ 2982425 (+)
LOC110525071 LOC106585963 other upstream 1956728 2743964 ~ 2866482 (+)
zfr zfr other upstream 2381580 2342330 ~ 2451362 (+)
G468732 NA other downstream 1315956 6108379 ~ 6156681 (+)
G468643 LOC106607869 other downstream 1402349 6194772 ~ 6199155 (+)
G468755 NA other downstream 1417776 6210199 ~ 6244501 (+)
G468768 NA other downstream 1462053 6254476 ~ 6371873 (+)
G468791 NA other downstream 1585216 6350096 ~ 6379704 (+)

Expression


Co-expression Network