LOC110525237 (mex3c)


Basic Information

Item Value
gene id LOC110525237
gene name mex3c
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 10360765 ~ 10365694 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605212.2
GGTGGCAGCAAAATATCGTCCAGTCGTCCGGAATGCTACAATGTACAAGAAGAAGATTGAATAAACTCGCGAGAAGTCCCGGAACCGTTTCTGCTGCTGAGAGAGGTGCATGAAGAAAAGACGAAACACAACAAAGTAAAACTGGCGCGGGCGCTACTTTTAATAATAACTTTTTCATAAATGTATAGTTACAGACCACAGTAACTAACTATTTAAACGTGTGGTATTAATTTAGTTAAATAACGTCGTTGGTAGAATTTCATAATGCCAAGTAGCACATCTTTGTTGGAGACCGAGGAAACTGAGCCGGAGATCCCGCCACTAGTTGTGCATGCATTCGCCGACATAGGCCTGGATGACCACTACAGACACACGGAACAACCCGAAAGCCTTTTGCATCCACGCCCGGTCTCTCATTTCAATGTGCTTGGTGCCGTGCTGGACCTACAGCCTATACAGCACCCCCATCCGACACCGACGGAAGAGGACGAAGAAAGAGCCAATGAAGACGTGTTGGGAGAGGATGATTTCAACAAGACGCTGCTTGTGCAGGCCCAAGGCTCGGGACTAGGCTCTGTTATGCTACCTGGATTGGATACGCCCGAGACACTCTTGCTGTACAATGAGTTTGACCACGGCACACTACAACAGGCTACGGGAATGATGATTTTACCGCCTGTGTATGGAGAGCCTGGCTATGAAGTTGAGACATCGCTGCTCATGCGGAGGAAGAGTGTGAACACAACAGAGTGTGTCTCGGTGCCCAGCTCAGAACATGTTGCCGAGATTGTCGGTAGACAAGgtTGCAAGATCAAGGCATTGCGAGCAAAGACCAACACCTACATCAAGACCCCAGTGCGAGGGGAGCAGCCGGTGTTCGTGGTGACAGGGCGGAAGGAGGATGTGGTCATGGCCAAGAGGGAGATCCTCTCGGCGGCTGAGCACTTCTCCCTCATCCGAGCCTCCCGGAACAAGGCAGGTTCGATGGCTGCAGCAGGGCCAGGGCTACCTGCTGCACCTTCCCTACCTGGTCAAACCACCATCCAGGTGCGTGTTCCCTACCGCGTGGTGGGACTGGTGGTTGGGCCCAAGGGGGCGACCATCAAGCGCATCCAACAGCAGACACACACTTACATTGTCACTCCTAGCCGAGACAAAGAGCCAGTGTTTGAGGTGACGGGCATGCCTGAGAATGTGGACAGAGCACGAGAGGAGATCGAGGCCCACATTGCCATACGCACAGGCAACTGTGTGGAGATTCCAGGAGACGAGAACGACTTCCACTACAACGGCACTGACGTCAGCTTCGAGGCGGGAAGCTGTGGGGTGTGGCTGCAGTCGACCGCAGCCGCACCTGCCAGTGCCCAGCGTACCAGCAACTGCGGTGTGCGCATGACCGCCAACTACCGCAACGACAGCTCCAGCTCTCTGGGCAGTGGCTCCACTGACTCCTACTATGGCGGAGGGGGGAACCGCATGGCCGACTTCAGCCCCACCAGCCCCTTcgtcaacaataacaacaatgttGGGGCCAGCTTCTGGTTTGAGGAGACTCTGCTCCCCTTGGCGTCTGAGGAGCTGGCAGCACTGGGATCTCCTGGGTTTGACCCTCTGGCCATCACCACAGCTGCTCCTGCACCGCAGCCACAGGTGGTGTGGAGCCACTTGGAACAGGGTGTCCAGCTGTTGGGTGGTCGCCAGGCCCCTGTCCGAGACAGCCATTCCGGCACACCTCACCTCTCCCCTGCCTTCCAAGAGGCCTTGGAACACCCCATGGCCCAGCGGGTTCAAAGGGTCTCCCTCAGCGTCTCAGAGTCTCAAAAGTTCCCAGTCTACGGCCCCACCTTCTCGTCCTCCAGTGACAGCTCCAGCTCTCCCCCAGACTCATGCAGAGGAGGCCAGGAATGCATCCGTTGCCTGGAGAGTGAGATCATCGCAGCCCTGGTGCCCTGCGGACACAACCTCTTCTGCATAGAATGCGCCAACCGCATCTGCCAGAGCCCCGAGGCCATCTGCCCAGTGTGTCAGGCACCAGTCACCCAGGCCATACGGCTGAGCCTGCCCTGAGCCCTGACGGGGTTGGTTGGGGGAGAGGGGCAGAGTGGGTGGTGTGTGGGTCCACGCACGTGCCTAGTATTGTCCTCCTGGTCAGACTCGCTATGTAACAATGGGATTCCCTGAAATACTATTTTATTTTGACATGTTAATACTCTTCCTAcctttgtgtttttattttaaatgtaatgTATCACATTTTTGGGGATCACTGAACTTATCCTAGGTGTTCAACTGTCTTTGAATCAAGGTTTAAGTTGGTTATAACATTTTATTTCTCTCCTGGCCTTAGTTGGGCCTTTTATTTTTCTGTTAGTCTTTTTTCTTTTTATATGAGAAAATACTTCTCCCTGTCTGTTATTAGCTGTGCTTacagacaggaagtaccaggacGTGCTACTTCAGTACTGCCATGCTTTCCATTGCAACTTGAAAACATGATCTGTTTACAGTAACTCGTGCCTAATTTCACTTAAGTAATTGAAACATACGACCGGTTTTGTGGGCACGCAGTGTTACCATAGAACTCTATAGAAAAAGCCTGTGGCCTTTTTTTAGAAAGCATGTATGTTATTGAACACTATCACTCAACCCATACCTTCCGCTTCAGGAGGTCAGACTGACGATGCATTTGGGTAGTGACCTGGTCTTCCGTTGTGGTCAACTCATGCTCCTATGTAGGTGGTTGGGTTCCTGACATTCCAGCCATATTATCCAGTATTTTTTTTACCCACATTGAACTTAACTAGCCTACACCTACCCTAGTGTGTTAAATTGGACTAACGGCCTCCTGACTGTGGTACCACCTCTTCATATGATCTGCCTTCTCACGTTTTGAGTTTTATCATGTGCCCAAGCACTGACCCCATCTCTTCTCTGCTGACAGATGATACCTAGTATTACCCCGGCTGTCATCCTCTCATCCCTGTTCCCGTCCGCTGTAGGCTGCATTACACAGGCAGCcgaattctgatattttgcccaattattggcaaagcTCTGATCTGATTGGGCTGACTGTAAATGCAGCTCGGGTGTGTTATTCTAACTTCTGGGGAATGCATTGGTCCTAAACCTCTCAACCCCAATCTTTATATTTTGTGTATGGAATATTGTTAATGACAGGTAAATAtagacatttatttttatttcacttgaagttacattatatactgtatataaatatattaaaatgtttacaaataattatttttttcctCTGTGCAGAACTGAGAGGGTGAGTTGCGGTGTACTGCAGACTGTCAGTGATATTTGCTTGTAGTATATTTCACCAGTGTTGAAAAACGATTAGCTGCCGTCTTGTAGTTGAGGGAAAGTGCACATACGCATGTTTTCATAATGTACCGCATTGTGCACTGCAAAGGCCAAGGATCAAACATGAGCTGCACCTGTACGCTACCAAATTAATGGAATACATGCTTCTTAAATATCTATGCTGTACCAACAGTTAAAGAATTTGCTAATTTTACTACACTTCTGTTATGTATATGTAGGGAAGACTAATGACATAAATTTAACAAATTGAGTCAAGTTTAAAGCAAACTATATTTTATGATAAATGGCCTTCTAAGTTGTGGCCAAAGCACTGATTTATATATTTGCTGTAAAGAGAATTAAGAGTTTTATTTTTCTGATATTACTTAATAAAGACGGTTTCATTCAAAA

Function

symbol description
mex3c Enables RNA binding activity and ubiquitin protein ligase activity. Predicted to be involved in protein ubiquitination. Predicted to act upstream of or within chondrocyte hypertrophy; energy homeostasis; and regulation of fat cell differentiation. Predicted to be located in cytoplasm and nucleus.

NR:

description
RNA-binding E3 ubiquitin-protein ligase MEX3C

GO: NA

KEGG:

id description
K15686 MEX3, RKHD; RNA-binding protein MEX3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605212.2 True 3741 mRNA 0.48 2 10360765 10365694

Neighbor

gene id symbol gene type direction distance location
bmpr1ba bmpr1b coding upstream 725684 9478107 ~ 9635081 (+)
pdlim5a pdlim5 coding upstream 882895 9351146 ~ 9477870 (+)
opn4xb opn4x1a coding upstream 1015235 9315808 ~ 9345530 (+)
LOC110525088 LOC106585913 coding upstream 1086771 9228570 ~ 9273994 (+)
LOC110525222 ndc80 coding upstream 1196947 9141512 ~ 9163818 (+)
aptx LOC100136186 coding downstream 19214 10384908 ~ 10386345 (+)
LOC110525245 LOC106585833 coding downstream 93943 10459637 ~ 10460645 (+)
mpeg1.1 mpeg1 coding downstream 110639 10476333 ~ 10479220 (+)
prf1.5 LOC106585834 coding downstream 114436 10480130 ~ 10484335 (+)
LOC110525250 hpgds coding downstream 132064 10497758 ~ 10509129 (+)
G472380 NA non-coding upstream 51940 10308332 ~ 10308825 (+)
G472367 NA non-coding upstream 72272 10283633 ~ 10288493 (+)
G472336 NA non-coding upstream 122065 10238268 ~ 10238700 (+)
G472323 NA non-coding upstream 135347 10225216 ~ 10225418 (+)
G472231 NA non-coding upstream 136232 10164997 ~ 10224533 (+)
G472428 NA non-coding downstream 11819 10377513 ~ 10377748 (+)
G472483 NA non-coding downstream 122258 10487952 ~ 10488157 (+)
G472487 NA non-coding downstream 125499 10491193 ~ 10491405 (+)
G472669 NA non-coding downstream 212449 10578143 ~ 10578381 (+)
G472675 NA non-coding downstream 219617 10585311 ~ 10587239 (+)
G472364 NA other upstream 79642 10280306 ~ 10281123 (+)
G470770 NA other upstream 1135252 9223351 ~ 9225513 (+)
G470599 NA other upstream 1549822 8809973 ~ 8810943 (+)
G470292 NA other upstream 2143491 8213280 ~ 8217274 (+)
G473070 NA other downstream 912644 11278338 ~ 11279265 (+)
G474321 NA other downstream 1822594 12188288 ~ 12190572 (+)
G474851 NA other downstream 2138066 12503760 ~ 12504119 (+)
G474949 NA other downstream 2346612 12712306 ~ 12713298 (+)
G475692 NA other downstream 2947985 13313679 ~ 13313969 (+)

Expression


Co-expression Network