me2 (me2)


Basic Information

Item Value
gene id me2
gene name me2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 10386584 ~ 10414782 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605213.2
CATCTTTCTCCAGCTTCGCATTTGCCTGTCAACGAACGAGGTGGTCACTCTGCACTTGATGACATTTCGCATGCAATTGTTGCAGTAATATGCCCTCTAAATTATAAGGggcaggtaaaaaaaaatactctTCTTCACTCAACAATAAGCGAAGGACCTGAGAACAACTGCTGTGCACCATGTTGTCTAGACTGAGGGCATCACTGATGCTGCGGCCCTGTGTGAGCGCCTGCCGCTGGACACACACCAAAGAGAAGGGCAAGCCTCTCATGTTGAACCCTCGCACCAACAAGGGCATGGCCTTCTCACTGCAGGAGAGGCAGATCCTGGGTCTTCAGGGTCTTCTGCCCCCCAAGATAGAGTCCCAGGACATCCAGGCCATGCGTTTCCAGAGGAACCTGAAGAAGATGACAGAGCCACTGGAGAAGTACATTTACCTGATGGGGATCCAGGAGAGGAACGAGAAACTCTTCTACCGCGTGCTGATGGAAGACATTGAGGAGCTGATGCCTATCGTTTACACTCCCACTGTGGGCCTGGCCTGTACGCAGTACGGACACATCTTCAGGAGGCCCAAGGGCCTGTTCATATCCATCTTGGATCGAGGCCATATTCGCTCCATATTGGACAACTGGCCAGAGACCAATGTGGCGGCGGTCGTGGTGACAGATGGAGAGCGTATCCTGGGCTTGGGGGACCTGGGGGTGTTTGGGATGGGCATCCCTGTGGGGAAACTGTGCCTGTACACCGCCTGCGCTGGTATCAGGCCTGAGAGGTGCCTTCCTGTGGTCATCGACGTGGGAACTGACAACGAGACCCTTCTGAAGGACCCATTCTACATGGGTTTGTACCAGAAGCGGGATCGTTCCCAGCTCTACGATGACCTGATCGATGAGTTTATGGAGGCTGTGGTGGACAAGTACGGCCAGGACACCCTGATCCAGTTTGAAGACTTTGGGAATCACAATGCATTCCGCTTGATGAGGAAATACCGCGAGAAGTACTGCACTTTTAACGATGACATCCAAGGAACTGCAGCGGTTGCCCTGGCAGGGCTGTTGGCAGCTCAGAGGGCCATTGGAAAACCCATCACTGAACATAGGATTCTGTTCTGCGGAGCAGGGGAGGCTGCCCTGGGTATCGCCAACCTGATTACCATGTCGATGGTGGAGAAGGGTTTAACCCAGGACGAAGCCAGGAAAAAGATCTGGATGTTTGACAAGGACGGTCTACTGGTCAAGGGCCGATCGCAGGAGACAGATAGCAACCAGGAGGCTTTTGTGCATGAAAGTCCCGGAGATGTGCAGAGCTTCTTAGATGCAGTCAACGTCATCCAACCAACAGCCATTATCGGTGTGTCCGGGGCTGGACGCCTCTTTACCCACGACGTCCTCAAAAAGATGGGCACCCTAAATAAACGACCAATTATATTCGCCTTGAGCAACCCCACCACCAAGGCAGAGTGCACGGCTGAAGATGCCTATACCCTCACAGATGGCCGATGCCTGTTTGCCAGTGGAAGTCCGTTTGACACGGTGACTCTGGCTGATGGACGtgttttcacacctggacaaggGAATAATGCTTACATATTCCCAGGTGTAGCCCTGGCTGTGATCCTCAGTGGCGTGAGACACATCAGTGACACGGTCTTCCTGGAGGCTGCCAAGACCCTGGCAGACCAGTTGACTGATGAGGAGCTGGCGGAGGGGAGGCTGTACCCGCCACTGTCCAACATCCGAGAGGTCTCTGTCCAGATGGCAGTCAAGGTGGTCCGGTTTGTGTACGCCAACAACATGGCCTTCCGGTACCCAGAGCCCAAGGACAAGGACACCTTTGTCAGGTCAACTGTATGGGACATCAACTACGACTCATTTCTCCCTGACATCTATGAGTGGAAAGGGATGAACCCAGCACCTGATCATTAGAGAGTTTTGGGTGTGGAAAGGGGGCAACAAATCACGGTAGGATAGGTGGGCGGGCGTTAAAGAGGGAATGGTAAAACTGGGAGGTGGGGAGGACAGTGAAATTAGGATAGTTGTTTAATCCTAGGGCAGATATTTGACTGATTTGTTTGTCAAAATCAATTGGCGGGCCAGAAAAATGTATATCCAGTTTTTGTCATTCATGAGTGGCCtggagtttttttttcttttctaaccaaataacccccccccccccccctagttaTGTTTAACACAGGCCCTGATTTTCCTTGTTCAGTTTCCACATGAAAATCCTCCAGAAGTGGGGTTATTGTTAGTCAACATGCTGCTAGTTAAACAGAAGGATTCCAACATATAATATCACTCCAAGCTCTAAAGACCTTGCCTTGAATTAGTTCATGAAACAGTTATGCAAAAAATATAAGTAAAACTCAGTAATAGTTTAAAggctttttttgtttattttttgttgttgttgttgtccataTCCCCATAAGAAATAATATACAGTGTatgtatattgtgttattgacattctagtcatttagctagggttggggtcaattctgtTTTAATTCCAGACAATTCAGGAAGtgcactgaaattccaattctcttggaatgcttttcaatgaggGACATTTTGAATTGGAATTTGGTCTGCTAAattcagggttggggtcaataaGGAAAGTAAACGTtcttattcagagcgacttaAGACTGTAATTATGCACTTGttagacagttgacagagccTGGATGTTTTGTAGAGAGTATGTTCGCATGTGGGTGTGAAATGTCTCCCAGCTCTGATGATATTTAACTTGAAGATGGACGGTGACAGTTATGAAGTAGATCAATATGTTTGTGTCATGaatcctggggtgtattcattagtcggatTCCTTTGTAAAAAGTTTTGTctattgcaaaacgttttgcaatggaaaagGTTCAGTCCAAActgaaaacattttgcaatgaaaatgtgtttctattggacaaatgttCAGTTTGCTTGGTTTACTTCTGTTTGGTACCTAGAGTAAATGgtttccattgcaaaacatttAGCAAAAGACCAATGAATATACCCGAGATAATATCACCATGAGTTTCTCCCAGAGTAAAGACCAGGCATTGAGGGGAACCAGCCATATTCCATGGCCATACACATATCAGGGGATGGGGCTAATTTTCAGTATAGAGAGAAGAATGCTGCAATAAGCACCATATCCAAATAGACATGACCAATGTTAAGGTAAGCTCCATTGTcagaaaacataaatacattacaTTAACTATAATGCTCTTCACAGTCAGTTTTGTATAGGCAGCATATGGTTtacaaacatacattttttttaaatatatttttttttactggttTTATGTTTTAGCCACATCTtatatacagaactgttcattcACTTTTTGAGAAAATGGAAATAAGTAAAAAGATTAGCTGGATAGAAAACCAGCTTAAGGCAGCTGAAGTTAAGATACACAGGTCCTAGATTTGTGAGACCGTTTAGTTAAGGATGGTAGACTggcttttttttttatccatctgCATAGGTGAGCGACATGACTCCCATTTTATACACACCTCACTTCTCACCGCAGACGTAGCCAAAGAACAATGAATTGTATAGGAACACAATagttgaagaaaaaaatatattaaaatcgGCGTATTATTTTTTATGCATATCCAACGGGCTAATTATATCTATTGTACTGTTTTACAGTTCTCTTGTTGTAGTTGATCAAACTAGTTTGATGAGATGTCATTCACAAGTGTACTATGTTCCACCCTTGAATTTAGATTGGACCATTAAATGACAGTCGGTCTCATTCAATGATTATGTCGGCCCACAAGCCTGTCCACACCTGCAACGTTGGTCTCCCATTCAGAGAATTGCTGTGCTGTATTCTTGTCTTGTTTTCTTTTCATTCATTCACTTTTAAGTGCCGTGGTAAAAGTGAATGGTTGAATCCCTGATGGTCCTTCCTCTTCCAATGTCTTTGATGTGTGCATACATGTATGTGTTTCTGGAGTTTATTTTTGTTACGCAGAATGGCCTTAGCGAATGAACGCACAAAGCGGCAAAAGCGCCCCTGGAGACCCCTATGTGTGCTGTTACATGTGcagaattaaaattagttttACACTT

Function

symbol description
me2 Predicted to enable malate dehydrogenase (decarboxylating) (NADP+) activity. Predicted to be involved in malate metabolic process and pyruvate metabolic process. Predicted to be active in mitochondrion. Is expressed in several structures, including cardiovascular system; hatching gland; musculature system; polster; and visual system. Orthologous to human ME2 (malic enzyme 2).

NR:

description
NAD-dependent malic enzyme, mitochondrial

GO:

id name namespace
GO:0006108 malate metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity molecular_function
GO:0046872 metal ion binding molecular_function
GO:0051287 NAD binding molecular_function

KEGG:

id description
K00027 ME2, sfcA, maeA; malate dehydrogenase (oxaloacetate-decarboxylating)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605213.2 True 4125 mRNA 0.45 15 10386584 10414782

Neighbor

gene id symbol gene type direction distance location
elac1 elac1 coding downstream 2190 10381626 ~ 10384394 (-)
smad4 smad4 coding downstream 5115 10369969 ~ 10381469 (-)
stpg2 stpg2 coding downstream 26204 10289016 ~ 10360380 (-)
si:ch73-72b7.1 LOC106585820 coding downstream 429077 9644491 ~ 9957507 (-)
rtgdnf rtgdnf coding downstream 1190451 9194633 ~ 9196133 (-)
LOC110525243 mapk4 coding upstream 3596 10418378 ~ 10441341 (-)
tspan36 LOC106585832 coding upstream 34902 10449684 ~ 10457941 (-)
LOC110525249 smarcad1 coding upstream 94548 10509330 ~ 10534303 (-)
LOC118964796 NA coding upstream 119973 10534755 ~ 10563364 (-)
LOC110525006 atoh1 coding upstream 162747 10577529 ~ 10579664 (-)
G472531 NA non-coding downstream 86080 10298899 ~ 10300504 (-)
G472368 NA non-coding downstream 98004 10283624 ~ 10288580 (-)
G472365 NA non-coding downstream 105576 10280285 ~ 10281008 (-)
G472340 NA non-coding downstream 145845 10240443 ~ 10240739 (-)
G472322 NA non-coding downstream 161487 10224874 ~ 10225097 (-)
G472597 NA non-coding upstream 22605 10437387 ~ 10438947 (-)
G472617 NA non-coding upstream 73453 10488235 ~ 10488438 (-)
G472620 NA non-coding upstream 78102 10492884 ~ 10493226 (-)
G473181 NA non-coding upstream 170532 10585314 ~ 10587238 (-)
G472539 NA other downstream 10507 10373852 ~ 10376077 (-)
G470834 NA other downstream 2088163 8296569 ~ 8298421 (-)
G469751 NA other downstream 2731966 7652639 ~ 7654618 (-)
G469411 NA other downstream 3222012 7159458 ~ 7164572 (-)
G469361 NA other downstream 3590589 6794427 ~ 6795995 (-)
G472576 mpeg1 other upstream 61627 10476409 ~ 10479846 (-)
LOC110525252 ccser1 other upstream 964745 11280815 ~ 11390675 (-)
G473930 NA other upstream 1186733 11601515 ~ 11601997 (-)
G474030 NA other upstream 1327420 11742202 ~ 11742758 (-)
LOC110525267 LOC106585853 other upstream 1540484 11955217 ~ 11979397 (-)

Expression

me2(me2) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 40.
End of interactive chart.

me2(me2) Expression in each Bioproject

Bar chart with 21 bars.
me2(me2) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 750.
End of interactive chart.

Co-expression Network