LOC118965115


Basic Information

Item Value
gene id LOC118965115
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 11744669 ~ 11744803 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118965115
AAACTTACCTGGCATGTGAGATACCTTGATCACCCAGGACAAGGCTCGACCATTGCACTCAGGCCGTGCTGACTTCTGTGAATTCTAAAAATGTGGGAATCTCGACTGcataatttttaaaaaacatttaatgtT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118965115 True 135 mRNA 0.41 1 11744669 11744803

Neighbor

gene id symbol gene type direction distance location
commd10 comda coding upstream 139981 11562467 ~ 11604688 (+)
LOC110525261 ap3s1 coding upstream 183062 11538277 ~ 11561607 (+)
LOC110525250 hpgds coding upstream 1235540 10497758 ~ 10509129 (+)
prf1.5 LOC106585834 coding upstream 1260334 10480130 ~ 10484335 (+)
mpeg1.1 mpeg1 coding upstream 1265449 10476333 ~ 10479220 (+)
LOC110525262 dmxl1 coding downstream 1210 11746013 ~ 11809089 (+)
LOC110525265 LOC106585816 coding downstream 79556 11824359 ~ 11837872 (+)
pheta1 LOC106585851 coding downstream 109093 11853896 ~ 11857562 (+)
sh2b3 LOC106585852 coding downstream 144134 11888937 ~ 11950017 (+)
LOC110525268 mapkapk5 coding downstream 243559 11988362 ~ 12010362 (+)
G473858 NA non-coding upstream 50346 11694060 ~ 11694323 (+)
G473819 NA non-coding upstream 98523 11645891 ~ 11646146 (+)
G473806 NA non-coding upstream 121316 11623116 ~ 11623353 (+)
G473801 NA non-coding upstream 126427 11617512 ~ 11618242 (+)
G473799 NA non-coding upstream 129758 11614634 ~ 11614911 (+)
G474038 NA non-coding downstream 55111 11799914 ~ 11800392 (+)
G474142 NA non-coding downstream 96971 11841774 ~ 11842085 (+)
G474143 NA non-coding downstream 98106 11842909 ~ 11843237 (+)
G474185 NA non-coding downstream 135787 11880590 ~ 11880841 (+)
G474189 NA non-coding downstream 139431 11884234 ~ 11884593 (+)
G473070 NA other upstream 465404 11278338 ~ 11279265 (+)
G472364 NA other upstream 1463546 10280306 ~ 10281123 (+)
LOC110525088 LOC106585913 other upstream 2470716 9228570 ~ 9273994 (+)
G470770 NA other upstream 2519156 9223351 ~ 9225513 (+)
G470599 NA other upstream 2933726 8809973 ~ 8810943 (+)
G474321 NA other downstream 443485 12188288 ~ 12190572 (+)
G474851 NA other downstream 758957 12503760 ~ 12504119 (+)
G474949 NA other downstream 967503 12712306 ~ 12713298 (+)
G475692 NA other downstream 1568876 13313679 ~ 13313969 (+)
G476234 NA other downstream 2240037 13984840 ~ 13985259 (+)

Expression


Co-expression Network