Item | Value |
---|---|
gene id | LOC110525271 |
gene name | LOC106585862 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 12139618 ~ 12157601 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
uncharacterized protein LOC109875527 isoform X1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036979415.1 | False | 3736 | mRNA | 0.51 | 14 | 12139618 | 12157601 |
XR_005052018.1 | False | 3374 | mRNA | 0.52 | 15 | 12139618 | 12157601 |
XR_005052019.1 | True | 3257 | mRNA | 0.52 | 14 | 12139618 | 12157601 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
rasef | rasef | coding | downstream | 174 | 12103255 ~ 12139444 (-) |
LOC110525269 | tle1 | coding | downstream | 76331 | 12040527 ~ 12063287 (-) |
LOC110525267 | LOC106585853 | coding | downstream | 160221 | 11955217 ~ 11979397 (-) |
hsd17b4 | hsd17b4 | coding | downstream | 317008 | 11808873 ~ 11822610 (-) |
LOC110525095 | LOC106585847 | coding | downstream | 418273 | 11629016 ~ 11721345 (-) |
frmd3 | frmd3 | coding | upstream | 6966 | 12164567 ~ 12244072 (-) |
LOC110525275 | LOC106585859 | coding | upstream | 92880 | 12250481 ~ 12257863 (-) |
gkap1 | gkap1 | coding | upstream | 101014 | 12258615 ~ 12271556 (-) |
LOC110525279 | LOC106585809 | coding | upstream | 152578 | 12310179 ~ 12555360 (-) |
rtkn | rtkn | coding | upstream | 431459 | 12589060 ~ 12703826 (-) |
G474649 | NA | non-coding | downstream | 6989 | 12132354 ~ 12132629 (-) |
G474646 | NA | non-coding | downstream | 16144 | 12122622 ~ 12123474 (-) |
G474641 | NA | non-coding | downstream | 42786 | 12096484 ~ 12096832 (-) |
G474627 | NA | non-coding | downstream | 81139 | 12058042 ~ 12058479 (-) |
G474609 | NA | non-coding | downstream | 119668 | 12019722 ~ 12019950 (-) |
G474664 | NA | non-coding | upstream | 124038 | 12281639 ~ 12282596 (-) |
G474722 | NA | non-coding | upstream | 127494 | 12285095 ~ 12285402 (-) |
G474728 | NA | non-coding | upstream | 147662 | 12305263 ~ 12305530 (-) |
G474731 | NA | non-coding | upstream | 149552 | 12307153 ~ 12307428 (-) |
G474793 | NA | non-coding | upstream | 235852 | 12393453 ~ 12394430 (-) |
G474614 | NA | other | downstream | 110008 | 12029159 ~ 12029610 (-) |
G474030 | NA | other | downstream | 396860 | 11742202 ~ 11742758 (-) |
G473930 | NA | other | downstream | 537621 | 11601515 ~ 11601997 (-) |
LOC110525252 | ccser1 | other | downstream | 755172 | 11280815 ~ 11390675 (-) |
G475413 | NA | other | upstream | 794651 | 12952252 ~ 12954051 (-) |
LOC110525296 | arrdc3 | other | upstream | 871784 | 13026299 ~ 13046348 (-) |
G475573 | NA | other | upstream | 1039714 | 13197315 ~ 13198012 (-) |
fam172a | LOC106585793 | other | upstream | 1873814 | 13758198 ~ 14087746 (-) |