LOC110525306 (LOC106585757)


Basic Information

Item Value
gene id LOC110525306
gene name LOC106585757
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 14691564 ~ 14706855 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605316.2
GAAGACATGAGGCTTTTTGGAAGTGTTGATAAAATGAGATGTGCAGGCGGACGAGTCGGTCAAGGATCGATTCGGACAAAGTGatctattgtatgacaagtgacagtttattcagagtaaagatatctggtacagCATGCATGGGCTCTGTCAAGTAACTCCGAGTGAGCTAAAAGAGGAGAGCTCCTAATACAGTTTGTTTACATATTTTATACAGCACAGAAAGTAGGTTGAGTCTTGAAGTTCTGGTTCTATGGTTGGTTCAGGTCCAGTTGTAGTCTCCGATGATTGGCTCCTGCAGTCCATCGCTTCAGCCGTTGCTCATTGTCCTTGTTGTCTTCTTGAGTccagggtgggtgtgtgtgtgtgtgtgtcctagatAAATTATAATCTTGTGCAGCATATGTGTGCAATGAGTTTGTGTGTCTTAATGTATGTGTAGTTCCTGTTTTCACATAGCCAGCCGTTGGCCGATACTGAGACTAAGGCATTGTGGTTGGGCCAGTTCCTGTTTATGTGCTGTGAGTGGAGACATCAGCCTGCTTGTGTCAGCGTTACTGAGTGCTGTTTCCTATTGAGTAATATTTGGAAGACAGATGAAGTTAATATGCTGAAGTTAATATGTTATAGCAAAAGGCCTGGTTATAATGAACACAGCTAAGTGCTCATGCTTACAGAAGTACATACTGACCGTAACGGTAGTAATGACGATAGTTGATCAGCGAAACTCCATTATTTGATAAGTAACGAACGTATTTTGATAGTATTATGCTTGACAAGCTGGTGAATGGCTTCTTCCCTTTTTTAATGAGAATCGCCATATTCAACGTCTCACTGTAATATTATGGTTCATACCACGCCCATCGTTTAGACTACATAGTGAAAGAGACTCGCTCCCTTCTTTCATAACTGTTGAACATTTTAGTTTCTTTATCTCTCCGTGCGCTCTTGAGATGTTGGCTACCATAAAGAACATTTCCGTAACCTACGACGGTATGGGCAAAACCTTTAGCAGCGGCGACTTCATTTCGGGGCGAATAACGTTGGAATTAGGAAAAGATTGCAAAATAGATTATCTTTCCATAAAAGCAAAGGGAAAGTCAGAAGTCCGTTGGACAGAACATCATAATAAGACAACTGTAACTTACCATTCCAAGGACAAGATGTTCAGCATTGAACAATTTATCATTCGAGAACAAAAAGGCCAAGGTTATGAACATGCCACACGTTACGATTGTAATGTTGTAGCTCCTGGAACTCACGTTTACCCATTCACATTTCAGATCCCTCAACAAGCAATGCCATCATCCTTTAAAGGCGCCTGGGGGAAAATCCTGTATACGTTAGAGGCCAAGTTGAGCAGATCAATGAGGATATCCAGCAAAGCCAGGGCTGAGTTCCCCTTTGTCTCCAAGgcagacctgggcagcatcccTGAGCtgatgATACCTCAGCATGGAACCAAGGATAAAAAGATGAAGTTATTCACCTCAGGAAAAGTGGGAATGGACATTCACATAGAGAGAATGGGCTACTACTTAGGTGAAGACCTAAAGGTTGTGGCGTCCATTGAGAATAGCTCCTCTCGTGAGATCAAGCCCAAGTACACCCTGTACCAGAAGGACAGCTTCTTTGCgaggggaaagaggagggtgTCCACCAAAGACATCCTGAAAGAGCTGGGAGAGCCCATCCCGCCATCTGGGAAACTGAAAGTCACTAAAGTCCTTAAAATCCCACAACACATTGTTCCATCCATCTTCACCTGCAGTAATATTAAATGCGAGTACAGGCTgaagATCGTCCTGGATGTTCCCTATGCCAGAGACCCAGAAATCAAATTGCCACTGGTCATCCTCCCTGCAACTCAAACGCCTGGACTGCAGCCGCCACCTTACTCTGACTTTGGTTTTGACTCGTTCGGGAATGCAAACCAACCCGGATGGAACAGCACACCACAATTTCCGGGAGCCTATCCACCAATGGCCCCAGGAGCCTATCCACCAATGGCCCCAGGAGCCTATCCACCAATGGCCCCAGGAGCTTTAGCGCCTCCCCCAGCCTACGGAACGTACCCATCCCTGTCTGATTTTGGTGGTAAATCCTAGTGGGAGAAAAGATAAGAGGGTAAAATATAACAAATGAATGCATTGTATATGATAATGTGCAGTGCTCTATCTCTTTAGACTTCCATTCATACTTCCATACTTCTCTGTTGTTGATGTTTCTTGTCATTGACATGACAACGTGTCTAACTTCAATATCTTTGTGGAAATGCCAACTATGAATAATGAAATGGAACAAAGCTCTGCTTAAGTGTGCCTTGTATAAGTTGTCTAAATATGAATATTGCTGTTACGAATGTAACAATGAATGTTCTAATTTCATGGTGGTGCTGATAATcgaataaaaatattttatatatatatatatatatatatatatatatata
>XM_021605318.2
ATCGTTTAGACTACATAGTGAAAGAGACTCGCTCCCTTCTTTCATAACTGTTGAACATTTTAGTTTCTTTATCTCTCCGTGCGCTCTTGAGATGTTGGCTACCATAAAGAACATTTCCGTAACCTACGACGGTATGGGCAAAACCTTTAGCAGCGGCGACTTCATTTCGGGGCGAATAACGTTGGAATTAGGAAAAGATTGCAAAATAGATTATCTTTCCATAAAAGCAAAGGGAAAGTCAGAAGTCCGTTGGACAGAACATCATAATAAGACAACTGTAACTTACCATTCCAAGGACAAGATGTTCAGCATTGAACAATTTATCATTCGAGAACAAAAAGGCCAAGATTGTAATGTTGTAGCTCCTGGAACTCACGTTTACCCATTCACATTTCAGATCCCTCAACAAGCAATGCCATCATCCTTTAAAGGCGCCTGGGGGAAAATCCTGTATACGTTAGAGGCCAAGTTGAGCAGATCAATGAGGATATCCAGCAAAGCCAGGGCTGAGTTCCCCTTTGTCTCCAAGgcagacctgggcagcatcccTGAGCtgatgATACCTCAGCATGGAACCAAGGATAAAAAGATGAAGTTATTCACCTCAGGAAAAGTGGGAATGGACATTCACATAGAGAGAATGGGCTACTACTTAGGTGAAGACCTAAAGGTTGTGGCGTCCATTGAGAATAGCTCCTCTCGTGAGATCAAGCCCAAGTACACCCTGTACCAGAAGGACAGCTTCTTTGCgaggggaaagaggagggtgTCCACCAAAGACATCCTGAAAGAGCTGGGAGAGCCCATCCCGCCATCTGGGAAACTGAAAGTCACTAAAGTCCTTAAAATCCCACAACACATTGTTCCATCCATCTTCACCTGCAGTAATATTAAATGCGAGTACAGGCTgaagATCGTCCTGGATGTTCCCTATGCCAGAGACCCAGAAATCAAATTGCCACTGGTCATCCTCCCTGCAACTCAAACGCCTGGACTGCAGCCGCCACCTTACTCTGACTTTGGTTTTGACTCGTTCGGGAATGCAAACCAACCCGGATGGAACAGCACACCACAATTTCCGGGAGCCTATCCACCAATGGCCCCAGGAGCCTATCCACCAATGGCCCCAGGAGCCTATCCACCAATGGCCCCAGGAGCTTTAGCGCCTCCCCCAGCCTACGGAACGTACCCATCCCTGTCTGATTTTGGTGGTAAATCCTAGTGGGAGAAAAGATAAGAGGGTAAAATATAACAAATGAATGCATTGTATATGATAATGTGCAGTGCTCTATCTCTTTAGACTTCCATTCATACTTCCATACTTCTCTGTTGTTGATGTTTCTTGTCATTGACATGACAACGTGTCTAACTTCAATATCTTTGTGGAAATGCCAACTATGAATAATGAAATGGAACAAAGCTCTGCTTAAGTGTGCCTTGTATAAGTTGTCTAAATATGAATATTGCTGTTACGAATGTAACAATGAATGTTCTAATTTCATGGTGGTGCTGATAATcgaataaaaatattttatatatatatatatatatatatatatatatata

Function

NR:

description
arrestin domain-containing protein 3-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605316.2 False 2452 mRNA 0.43 7 14691564 14706855
XM_021605318.2 True 1566 mRNA 0.43 6 14692426 14706855

Neighbor

gene id symbol gene type direction distance location
gig2p LOC106585755 coding upstream 46970 14641732 ~ 14644594 (+)
LOC110525299 LOC106585791 coding upstream 958504 13726709 ~ 13733060 (+)
LOC118965067 NA coding upstream 1366769 13322042 ~ 13324795 (+)
aqp3a LOC106585799 coding upstream 1737505 12940770 ~ 12954059 (+)
nol6 nol6 coding upstream 1765616 12896951 ~ 12925948 (+)
LOC110525102 LOC106585759 coding downstream 22 14706877 ~ 14718733 (+)
LOC110525103 LOC106585761 coding downstream 129288 14836143 ~ 14890175 (+)
LOC110525309 LOC106585763 coding downstream 262635 14969490 ~ 14995677 (+)
LOC110525312 NA coding downstream 1020642 15727497 ~ 15730287 (+)
LOC110525007 NA coding downstream 1110595 15817450 ~ 15821090 (+)
G477008 NA non-coding upstream 10991 14677125 ~ 14680573 (+)
G476980 NA non-coding upstream 55335 14636021 ~ 14636229 (+)
G476943 NA non-coding upstream 103304 14570132 ~ 14588260 (+)
G476861 NA non-coding upstream 250197 14439451 ~ 14441367 (+)
G476826 NA non-coding upstream 314579 14376702 ~ 14376985 (+)
G477365 NA non-coding downstream 111387 14818242 ~ 14819574 (+)
G477386 NA non-coding downstream 162795 14869650 ~ 14872190 (+)
G477404 NA non-coding downstream 190656 14897511 ~ 14897949 (+)
G477405 NA non-coding downstream 192259 14899114 ~ 14899315 (+)
G477407 NA non-coding downstream 195333 14902188 ~ 14902584 (+)
G476248 NA other upstream 676000 13997084 ~ 14015564 (+)
G476234 NA other upstream 706305 13984840 ~ 13985259 (+)
G475692 NA other upstream 1377595 13313679 ~ 13313969 (+)
G474949 NA other upstream 1978266 12712306 ~ 12713298 (+)
G474851 NA other upstream 2187445 12503760 ~ 12504119 (+)
G479239 NA other downstream 1652561 16359416 ~ 16359751 (+)
traf1 LOC106585784 other downstream 2272327 16970834 ~ 16982251 (+)
dab2ipa LOC106585786 other downstream 2394131 17016096 ~ 17126012 (+)
G480128 NA other downstream 2613919 17320774 ~ 17321165 (+)
G480219 NA other downstream 2737898 17444753 ~ 17445931 (+)

Expression


Co-expression Network