LOC110525102 (LOC106585759)


Basic Information

Item Value
gene id LOC110525102
gene name LOC106585759
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 14706877 ~ 14718733 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605049.2
atatatatatatataataatagtaAAAATGGCAATTTCCAAATAAGTACAGTGAAATAAATAGCAGGAACGTCCACGATGATAATAGGCTACTGGTCCATTTTTTTTATGATGAGATACATAAAACCAGGAACACCAACTAAATACCACACCCTATGCATACATAAACCTTATATAGGCCTTTATAACTTTTTATTTGATGGAGAAGAATCAGAGTTATGCTGTCACAAGTATTGGAAGATTAATCAGACGTGACTCAGATGTTTAATGATGACATTGCAAATATTGTGGGCGTAGGCCTACTTATTGTCCCCGCCTTTTGTAAATACAGACCTCCTCCCTTACTATGTTATATTAAAGACTGTTGTGAACCCTACCAAcatttgtttttctttctgtGTTGGTTACGCTTCATTTCGTGGACCAGAATGACAATCCAAATCTTTACCATCAAATATGATGCGGAAAATGAGCCATATGTATTTTCAAGGGGAGATACTATCACAGGGAGAATTATTTTGGTAGTTTCAGCTGAAACAAAGATTAAATGTCTTTCTATCAAGGCTAAAGGAAAAGCTCATGTTTTGTGGGAGGAAGATTATGGATTATACCTGGACGAAACATACCGTGCCAAATATGAATATTTTTCAATTGAGCAGTGTGTACTGCAGGAAGGGAATGGCACCAATGTTCTAACTACAGGAAGACATGTGTATCCTTTCTCTTTCCAAATTCCTGACGAGGACATGCCATCCTCTTTCCAGGGTAAATGTGGTCAAATCCTCTACTCATTAGAGGCTAAGTTGACCAGGTCAATGAGGTTTGACACCAAAGCCAAGACTGATTTCCCCTTTGTCTCAAAGGCAGACCGGTCTATGATCCCATATCTAATGAAACCTCAGCATGGGACCAAGGATAAGGATGTTATGTTCTTTGCATCTGGAAAAATCTCTGCGAGcattcacattgagagacagGGATACCAGCAAGgAGAGGCTCTGAAAGTCAGGGCAATTATTGTCAACAACTCAACTCGCCCAGTGACCCCAAAATACTACCTGTACGAAAAGCAGTGTTTCTACGCCCAGAAAAAGAGGAAAGTTCACACCCACAACATCTTGAAAGAGAAGGGCGATCGGGTCCCTGCTGGCACTCGGCAGACGGTGACCCAAGTTTTGACCATCCCTCCACAACTCCCTGCCACCATCTTCAACTGTCCTATACTCAAATTAGAGTACCGATTGAAGGTCATTCTTGATGTTAAACTGGCCATAGACCCTGAGATCAAGCTACCTATCGTTGTTCTTACTGCAACTCAAACTCTTGGACAGGAACCCCCACCTTACTCCAGTTTTGGTTTTGAGTCACAAGTCCCAACTGCATCTGAGCTACCACCCCCCTACGAAATGTTTGCTTCCTCGTCAAATTTCTATAGAAAATTGTAAAGGCATGGAGATTCTCAATTGGGCGCAAAAGTCTGTTCTCTACTCAACTCCTCCATCCTACTCTCTTCCATGCCCCAGAGGCCGATAAGGGGTCGCCATATATAGAAGAGGGTCAATTCGTTAATAAGGGAACAGAGGAGTTTGATCCTCTCCTTGATAGCCTCCTCTCTGGCCAAGGATATTGAGATGTATCCTACCAGAGTACTACATGGAAGAGGTTTGAAATGCACCACACCCCCTTTGAATCCGTTGTTGTTTTGTCAGAGAAAAGCATGTACCTTTAAATACAATATGCTACCTATAATTTTATCTATAAaacacccatctagtactgggttGGACCCCccctttgccttcagaacagcctgaatGGATGCACCGTATCAGCAACAATGTTTAAATACGCTGTGGCGTTGAACCGTTGCTcatttgtttgtctgtttgtggcccatctgttagcttgcacgattcttgccattctccttcgatctctcatcaacgagctgttttcacccacaggactgcagcTGActgaatgttttttgtttgtcgcaccattgttggtaaaccctagacactgtcgtgtggAAAAAGCCCAGGAGGGTGGCCATTTCTTCGATATTGGATCCGGCGCACCGATGTtgataccacgctcaaagtcgcaTACGTCACTTGTTTTGTCCATTCTAAcgatcgaacagtaactgaatgccacAATGCCTGTCTGGTGTACTTAATAAACTGGCCAGTGAGCGTATATATTAAAAGTCTAATTTCATACCAGCGTATTTGTTTTCAAGTTTCCTCCCCCTTGCCtcgattacctttgacctttttcaaaaagaggggaagagaggacagaggagatgacGTGAGGAATTGAGCAAATTCTATTGATATTCTCCTGGATAAAGGGAGATGAAGGGTGAAGAATTTCAGAAGAATTAGAATTGATTATTGTATTGTCTAACCATTTCCTCCTTCACTTTTATTGGTCTTTTTTTGtatatgcatgcatgactgtacGTTGCTTTGGATGACagcttctgctaaatggcatattatattattatttagcaTCTATACGTATTGCTAATTTACCTGCCTTGATTTGAAATGTGTGCATGTTGccttagaaaataataaaaagcactatacaaa
>XM_036979438.1
cttatgtaaataatgtatttatgtttgtttttttaaataaatgtgcaaacatttcaaaaacttttcactttgtcgttatggggtattgtttgtagattgattaAATCTATTACTTTTTtcagcaattttagaataaggctgtaatgtaaacaAAAAATGgtaaaagtaaaggggtctgaatactttccgacagcactgtacatatacaaacaagttatttaggtcagacaggaaacacattctatagcacattcatTTTTTGTCACTAAAGAAATCTTGCTCCCCAATCTGACATGGATCCAGATATAACTTCATTTGACTGCTGTGTATCACATTTTTTCAGAAACCTCAGCATGGGACCAAGGATAAGGATGTTATGTTCTTTGCATCTGGAAAAATCTCTGCGAGcattcacattgagagacagGGATACCAGCAAGgAGAGGCTCTGAAAGTCAGGGCAATTATTGTCAACAACTCAACTCGCCCAGTGACCCCAAAATACTACCTGTACGAAAAGCAGTGTTTCTACGCCCAGAAAAAGAGGAAAGTTCACACCCACAACATCTTGAAAGAGAAGGGCGATCGGGTCCCTGCTGGCACTCGGCAGACGGTGACCCAAGTTTTGACCATCCCTCCACAACTCCCTGCCACCATCTTCAACTGTCCTATACTCAAATTAGAGTACCGATTGAAGGTCATTCTTGATGTTAAACTGGCCATAGACCCTGAGATCAAGCTACCTATCGTTGTTCTTACTGCAACTCAAACTCTTGGACAGGAACCCCCACCTTACTCCAGTTTTGGTTTTGAGTCACAAGTCCCAACTGCATCTGAGCTACCACCCCCCTACGAAATGTTTGCTTCCTCGTCAAATTTCTATAGAAAATTGTAAAGGCATGGAGATTCTCAATTGGGCGCAAAAGTCTGTTCTCTACTCAACTCCTCCATCCTACTCTCTTCCATGCCCCAGAGGCCGATAAGGGGTCGCCATATATAGAAGAGGGTCAATTCGTTAATAAGGGAACAGAGGAGTTTGATCCTCTCCTTGATAGCCTCCTCTCTGGCCAAGGATATTGAGATGTATCCTACCAGAGTACTACATGGAAGAGGTTTGAAATGCACCACACCCCCTTTGAATCCGTTGTTGTTTTGTCAGAGAAAAGCATGTACCTTTAAATACAATATGCTACCTATAATTTTATCTATAAaacacccatctagtactgggttGGACCCCccctttgccttcagaacagcctgaatGGATGCACCGTATCAGCAACAATGTTTAAATACGCTGTGGCGTTGAACCGTTGCTcatttgtttgtctgtttgtggcccatctgttagcttgcacgattcttgccattctccttcgatctctcatcaacgagctgttttcacccacaggactgcagcTGActgaatgttttttgtttgtcgcaccattgttggtaaaccctagacactgtcgtgtggAAAAAGCCCAGGAGGGTGGCCATTTCTTCGATATTGGATCCGGCGCACCGATGTtgataccacgctcaaagtcgcaTACGTCACTTGTTTTGTCCATTCTAAcgatcgaacagtaactgaatgccacAATGCCTGTCTGGTGTACTTAATAAACTGGCCAGTGAGCGTATATATTAAAAGTCTAATTTCATACCAGCGTATTTGTTTTCAAGTTTCCTCCCCCTTGCCtcgattacctttgacctttttcaaaaagaggggaagagaggacagaggagatgacGTGAGGAATTGAGCAAATTCTATTGATATTCTCCTGGATAAAGGGAGATGAAGGGTGAAGAATTTCAGAAGAATTAGAATTGATTATTGTATTGTCTAACCATTTCCTCCTTCACTTTTATTGGTCTTTTTTTGtatatgcatgcatgactgtacGTTGCTTTGGATGACagcttctgctaaatggcatattatattattatttagcaTCTATACGTATTGCTAATTTACCTGCCTTGATTTGAAATGTGTGCATGTTGccttagaaaataataaaaagcactatacaaa

Function

NR:

description
arrestin domain-containing protein 3-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605049.2 False 2605 mRNA 0.41 6 14706877 14718733
XM_036979438.1 True 2056 mRNA 0.41 3 14716318 14718733

Neighbor

gene id symbol gene type direction distance location
LOC110525306 LOC106585757 coding upstream 22 14691564 ~ 14706855 (+)
gig2p LOC106585755 coding upstream 62283 14641732 ~ 14644594 (+)
LOC110525299 LOC106585791 coding upstream 973817 13726709 ~ 13733060 (+)
LOC118965067 NA coding upstream 1382082 13322042 ~ 13324795 (+)
aqp3a LOC106585799 coding upstream 1752818 12940770 ~ 12954059 (+)
LOC110525103 LOC106585761 coding downstream 117410 14836143 ~ 14890175 (+)
LOC110525309 LOC106585763 coding downstream 250757 14969490 ~ 14995677 (+)
LOC110525312 NA coding downstream 1008764 15727497 ~ 15730287 (+)
LOC110525007 NA coding downstream 1098717 15817450 ~ 15821090 (+)
LOC110525313 LOC106585767 coding downstream 1113767 15832500 ~ 15883790 (+)
G477008 NA non-coding upstream 26304 14677125 ~ 14680573 (+)
G476980 NA non-coding upstream 70648 14636021 ~ 14636229 (+)
G476943 NA non-coding upstream 118617 14570132 ~ 14588260 (+)
G476861 NA non-coding upstream 265510 14439451 ~ 14441367 (+)
G476826 NA non-coding upstream 329892 14376702 ~ 14376985 (+)
G477365 NA non-coding downstream 99509 14818242 ~ 14819574 (+)
G477386 NA non-coding downstream 150917 14869650 ~ 14872190 (+)
G477404 NA non-coding downstream 178778 14897511 ~ 14897949 (+)
G477405 NA non-coding downstream 180381 14899114 ~ 14899315 (+)
G477407 NA non-coding downstream 183455 14902188 ~ 14902584 (+)
G476248 NA other upstream 691313 13997084 ~ 14015564 (+)
G476234 NA other upstream 721618 13984840 ~ 13985259 (+)
G475692 NA other upstream 1392908 13313679 ~ 13313969 (+)
G474949 NA other upstream 1993579 12712306 ~ 12713298 (+)
G474851 NA other upstream 2202758 12503760 ~ 12504119 (+)
G479239 NA other downstream 1640683 16359416 ~ 16359751 (+)
traf1 LOC106585784 other downstream 2260449 16970834 ~ 16982251 (+)
dab2ipa LOC106585786 other downstream 2382253 17016096 ~ 17126012 (+)
G480128 NA other downstream 2602041 17320774 ~ 17321165 (+)
G480219 NA other downstream 2726020 17444753 ~ 17445931 (+)

Expression


Co-expression Network