Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110525312 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 15727497 ~ 15730287 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cytochrome c oxidase subunit 7C, mitochondrial-like |
| id | name | namespace |
|---|---|---|
| GO:1902600 | proton transmembrane transport | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0004129 | cytochrome-c oxidase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021605326.1 | False | 415 | mRNA | 0.45 | 3 | 15727497 | 15730279 |
| TU543784 | True | 412 | lncRNA | 0.45 | 3 | 15727508 | 15730287 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525309 | LOC106585763 | coding | upstream | 731820 | 14969490 ~ 14995677 (+) |
| LOC110525103 | LOC106585761 | coding | upstream | 837322 | 14836143 ~ 14890175 (+) |
| LOC110525102 | LOC106585759 | coding | upstream | 1008764 | 14706877 ~ 14718733 (+) |
| LOC110525306 | LOC106585757 | coding | upstream | 1020642 | 14691564 ~ 14706855 (+) |
| gig2p | LOC106585755 | coding | upstream | 1082903 | 14641732 ~ 14644594 (+) |
| LOC110525007 | NA | coding | downstream | 87171 | 15817450 ~ 15821090 (+) |
| LOC110525313 | LOC106585767 | coding | downstream | 102221 | 15832500 ~ 15883790 (+) |
| LOC118964846 | NA | coding | downstream | 438116 | 16168395 ~ 16175015 (+) |
| LOC110525319 | olfm1 | coding | downstream | 907264 | 16637543 ~ 16654193 (+) |
| slc2a6 | slc2a6 | coding | downstream | 1020728 | 16751007 ~ 16762323 (+) |
| G478430 | NA | non-coding | upstream | 50591 | 15676647 ~ 15676906 (+) |
| G478424 | NA | non-coding | upstream | 55004 | 15672168 ~ 15672493 (+) |
| G478375 | NA | non-coding | upstream | 115041 | 15611533 ~ 15612456 (+) |
| G478370 | NA | non-coding | upstream | 125264 | 15602013 ~ 15602233 (+) |
| G478144 | NA | non-coding | upstream | 288182 | 15439027 ~ 15439315 (+) |
| G478514 | NA | non-coding | downstream | 152433 | 15882712 ~ 15883517 (+) |
| G478560 | NA | non-coding | downstream | 157815 | 15888094 ~ 15888372 (+) |
| G478742 | NA | non-coding | downstream | 203000 | 15933279 ~ 15991347 (+) |
| G478794 | NA | non-coding | downstream | 278078 | 16008357 ~ 16011192 (+) |
| G478821 | NA | non-coding | downstream | 318841 | 16049120 ~ 16049354 (+) |
| G476248 | NA | other | upstream | 1711933 | 13997084 ~ 14015564 (+) |
| G476234 | NA | other | upstream | 1742238 | 13984840 ~ 13985259 (+) |
| G475692 | NA | other | upstream | 2413528 | 13313679 ~ 13313969 (+) |
| G474949 | NA | other | upstream | 3014199 | 12712306 ~ 12713298 (+) |
| G474851 | NA | other | upstream | 3223378 | 12503760 ~ 12504119 (+) |
| G479239 | NA | other | downstream | 629137 | 16359416 ~ 16359751 (+) |
| traf1 | LOC106585784 | other | downstream | 1248903 | 16970834 ~ 16982251 (+) |
| dab2ipa | LOC106585786 | other | downstream | 1370707 | 17016096 ~ 17126012 (+) |
| G480128 | NA | other | downstream | 1590495 | 17320774 ~ 17321165 (+) |
| G480219 | NA | other | downstream | 1714474 | 17444753 ~ 17445931 (+) |
