LOC110525319 (olfm1)


Basic Information

Item Value
gene id LOC110525319
gene name olfm1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 16637543 ~ 16654193 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036979466.1
AGCTCCCTCCCGCATTgtcacacacacccctgtcctTGTTTTGCGGAGCCAACTTTTGCGAATGTTTTTTCTTTCCATGCTTCTCATGCGAGGTGGCTGACAGAAGGAAGACAGAAGGAAAGGGATCTTCTGCACAACGCACTGAGATGCATTGAACATCATGCAGTGACTGCTCCTCACACTAGATTTGTTATTTACCTTTATTTGTGTGCTTAGCGCTGCAACGAAGATTGCAAGACGACGGGTATAAAAGAGGGAGAAGACATTACAGTGGAAAAAGACAATCTGCATGTGAAAACACTGGATCTAGTGCTATCGGAGGCAAGCGATGCAGCCTACTAACAAGCTCCTGAGTCTCACCCTCCTTGTCTTGATGGGCACCGAACTCACCCAAGTGCTCCCAGCCAACCCTGAGGAGTCATGGCAGGTTTACAGCTCAGCCCAGGACACCGAGGGCCGCTGTGTCTGCACTGTGGTGGCGCCTCAACAGTCCATGTGCTCGCGGGACGCCAGGACCAAACAGCTCCGACAGCTGCTAGAAaaaGTCCAGAACATGACCCAGTCTATCCAGGTGCTAGACCAGCGGACCCAGAGAGACCTGCAGTACGTGGAGAGGATGGAGGTTCAGCTGAAAGGTCTGGAGACCAAGTTTAAACAGGTGGAGGAGAACCACAAGCAGAACATTGCCAGGCAATACAAGGCAATAAAAGCGAAAATGGAGGAACTTAGGCCATTGATACCAGTGTTGGAGGAGTACAAAGCCGATGCAAAATTGGTATTGCGGTTTAAAGAGGAGCTCCAGAATCTGACGTCTGTGCTAAACGAACTCCAGGAGGAGATCGGCGCCTATGACTACGAGGAGCTACAAAACAGAGTGTCAAATCTTGAAGAGAGGCTTCGTGCATGCATGCAAAAATTAGCATGTGGGAAGCTGACAGGGATCAGTGATCCAATTACCATTAAGACGTCTGGATCAAGGTTTGGATCCTGGATGACTGACCCCCTGGCTCCTGAAGATGACACTAGGGTGTGGTACATGGATGGCTACCACAACAACCGATTTGTGCGGGAGTACAAGTCCATCTACGACTTCATGAATTCCGACAACTTTACATCTCACCGCCTCCCCCACCCATGGTCAGGCACTGGCCAGGTGGTCTACAACGGCTCCATCTACTTCAACAAGTTCCAGAGccacaccatcatcaagtttgacTTCAAGACCTCCGTCATCAGCAAGTCACGCCAGCTGGACTACGCCGGCTACAACAACATGTACCACTACTCCTGGGGCGGCCACTCAGACATCGACCTCATGGTGGACGAGGGCGGGCTCTGGGCCGTTTACGCCACCAATCAGAACGCAGGGAACATTGTCATCAGTAAACTGAACCCCAACACCCTGCAGATCATCAAGAGCTGGACTACCAACCACCCCAAGAGGAGCGCAGGAGAGGCCTTCATGATATGTGGCACGCTGTATGTCACCAATGGCTACTCCGGTGGGACCAAGGTCTATTATGCCTTCAGCACCAACTCGTCCACCTACGAGTACATTGACATACCGTTCCAGAATAAGTACTCTCACATCTCCATGCTGGACTATAACCCTAAAGACAGAGCACTGTACGCATGGAATAACGGTCACCAGGTGCTTTACAATGTCACCTTGTTCCACGTCATTCGGTCAGAGCAGGAGCAGTAGATAGCTAGCCATGCTGTTACCTTCTCAGTCACCGGCAGACCTGGGTTAAAATACTATTGGatatctttcaaatacttttaacATTTGCAgcagcctgcctggagtgccagatgggcagaGTTTGCAGTTTTGCAACAATTGTATTAATTCCATTATACCAGTCAAGCCTAATCAAGCCCGGCTAAATCAAGCaaatttgaacccaggtctggtccaCGGATGCTTCAAAGTAAAGGAGATACTATATGTAACTGTGGAAGGAGAGAAGTATCCTATATTTTAATCAGTAACAAGAAATACAGTACCTAATGATATATAATGTATAGAAACAAAGAGTAGAAAAGGAACCGAAAAGGTCATGCCTTTCTTGTTTTGGATGACTTCAAATGTCTTATAATGATTGTGTTTTTACGGAATTACCCACTCTTGACTTGTTTTTTATTTGATCACAGATAGTGCAGCCTATTGTATCATAGTTTTGAATTGAATTACATTTGGAAATGAAGAAAGTTTATATCCTGGGCCTTGTTTATCAACCTGTATAAAGCCAAACtgtagaacacaaacacacaatcatgACCATTTTCCCCAGGTGAGTGATCCTCATTTATTAATTAATTATATTACATGATCAGATGGTAAAGATGGTCAAATGTAGCAGCAATTTTCCATGTAACTCGATTCCCGCTTCTGTAAAGGTGGAGACTAGTGATCGTCCCAAAACACAGAGCCATGTGCAgaatagaaagccaattctatCCCCATGTGTTGGTAGCAAAATATCTAATTGGAAAATGTGTAATGGTACCTCAAAACATGTACTCAGTCTTTCCTGCGCAATACAACCTCTCAGGAACCAATATAACACAACCTGTCGTTTGCATGGAGTCATCTACACGGACATTATAGGATCTGATTATGATTGATAAAGGAGGCCCAATGGAGCACAGTTTCAAGAATCCAGTCAAACCACGAGTCAATGACAAAATACTGTATATCTGGGAACACTGACTACAGACTGTTGGAAGCACCCTGTTTCATTTCTGTGTCTTTGTGATGGTACAACATATTTTCTCTTTTTCTATCTTATTTTTGCATGGGCATTTTTACCGACCAAAATGGTTTTCTTCTCCGGATGTATTTTGCAATATTTGATGCTGTAGTGCAGGAGACTAGTTTAGCACTGTTAGGAGACAGGCTTTTTACTTTCTTATTGTCATTGGGGTTGATATATGTTCTTATTGTTGGAATTGATATTTACTGTGATAGCCTGTCTTTGTAGATTGGATTGTATTGACATAATTTGTCTAGCTCATATAGTTCTGtctggcaaaaaaatatataactagAACAATCACAAGAGAATGTACCAAACAATGTATCTATGAGCCAGTGACATACACACTGGCAGTTTTATTCCATTTGACTTCACAAGTCTACTGTCTGTTTCTTAGAGAGATCAATTGTGACATCTTATTCTGTTGAGCTTGCATATGTGTCGTATCTGCAATAAAATTCATATAAATGAACAAGATCTTTGTTCTA
>XM_036979467.1
GCTCCCTCCCGCATTgtcacacacacccctgtcctTGTTTTGCGGAGCCAACTTTTGCGAATGTTTTTTCTTTCCATGCTTCTCATGCGAGGTGGCTGACAGAAGGAAGACAGAAGGAAAGGGATCTTCTGCACAACGCACTGAGATGCATTGAACATCATGCAGTGACTGCTCCTCACACTAGATTTGTTATTTACCTTTATTTGTGTGCTTAGCGCTGCAACGAAGATTGCAAGACGACGGGTATAAAAGAGGGAGAAGACATTACAGTGGAAAAAGACAATCTGCATGTGAAAACACTGGATCTAGTGCTATCGGAGGCAAGCGATGCAGCCTACTAACAAGCTCCTGAGTCTCACCCTCCTTGTCTTGATGGGCACCGAACTCACCCAAGTGCTCCCAGCCAACCCTGAGGAGTCATGGCAGGTTTACAGCTCAGCCCAGGACACCGAGGGCCGCTGTGTCTGCACTGTGGTGGCGCCTCAACAGTCCATGTGCTCGCGGGACGCCAGGACCAAACAGCTCCGACAGCTGCTAGAAaaaGTCCAGAACATGACCCAGTCTATCCAGGTGCTAGACCAGCGGACCCAGAGAGACCTGCAGTACGTGGAGAGGATGGAGGTTCAGCTGAAAGGTCTGGAGACCAAGTTTAAACAGGTGGAGGAGAACCACAAGCAGAACATTGCCAGGCAATACAAGGGCTAACTTTAGGAAATTAAATCAAAGCTGCAGAGACTGAAGAGGCAGTTCTATTCCAGTGTTCTATCCCTGAACTTGACCACTGACTATTTGCACCATGCAGTTTATTTGAAAACTAGCACCCTTTTCACCCTCAGACCTGCACTGCTCTTTGCATTTCTGCATGTTAGTGTCGATGCATTCCATCAATAGATTTAGTTCAGTTTTTTAAAATTAATATTACTTTTGTTTTATTCAATTCCATATCCTGTTTAGTTTTGTCAATGCATAACTGGTTACCACAAAAAATAAGGAAACATTGTTGAATGTGACACAAAAGCATGTAACCCTAAGATGTTGCATTTTAAAaggtgaaaataaaatattttcccAATTGTT
>XM_036979465.1
GATTATGAATTGTCTACATGTTTTTTCTGTGAATGACAATCAAAATCCGGCACTTCTTTATTGGATTAAATGGGACTCGTAGGCTACCTTGCTTTCTATGGCACCCGTCAAAAAAATTGTGGCTGGTGGTTTCAATGTGATTGGATTATTACAGTTCTTGTCCCCATAGAGCCATCAAGCCACCGTTATTAAAGTAGCCAACCTATACAATTACGCTATCCAGTCTGAAAATGTCGTTTAGGCTCGTTTGTCTCCATTGCGTTTTCAGGGTTTCATACTTAAATTGAATCTATCACACAATTGACTTCTATGTCTGAAGTTATGCTATTTAGATATTGTTTTCCTGTCATGGCATTTTCTTGTATTTGGTGGCAAGGTACATAGTCCTGTTTCGCTGTGGCAAGCGCCAAAGCGTGGCGCCATGAATTTCATTTCAACGGAAAGTTGTTCTATCCGTGCGCGGTGGGCGGGGGTATTCAGCGAATGGGAGAGGCGACTGAATCCCTGTAATCTTCTAAACTCGAAAGCGATTGCGGGAGAACCACTTCACATTTTCCAACAACTACATTGAGCCATCATCAAAGTGGCTTTTGAAGAGAGCAGAAACCACCTGTCAGCCAAAGATGTTCAAACCTAAACTCACCGCTGTTGCAGCCCTGCCGTTGCATCCAATGATTGGCAATATGAATTGTCTAGTTAGTTCTTCACTGGAATGTGTACAAGGACATTTTTGGTAATACGACAAGAGCGCAGATATGTCGGTGCCTTTACTGAAGATTGGAGTGGTGTTGAGCACGATGGCTATGATTACTAACTGGATGTCGCAGACGTTACCGTCCTTGGTGGGACTTAACACCAACAAGCTCTCGGTATTATCAGGAGGGACAGCGGACCGGAGCACCGGCGTGCTCCCAGCCAACCCTGAGGAGTCATGGCAGGTTTACAGCTCAGCCCAGGACACCGAGGGCCGCTGTGTCTGCACTGTGGTGGCGCCTCAACAGTCCATGTGCTCGCGGGACGCCAGGACCAAACAGCTCCGACAGCTGCTAGAAaaaGTCCAGAACATGACCCAGTCTATCCAGGTGCTAGACCAGCGGACCCAGAGAGACCTGCAGTACGTGGAGAGGATGGAGGTTCAGCTGAAAGGTCTGGAGACCAAGTTTAAACAGGTGGAGGAGAACCACAAGCAGAACATTGCCAGGCAATACAAGGCAATAAAAGCGAAAATGGAGGAACTTAGGCCATTGATACCAGTGTTGGAGGAGTACAAAGCCGATGCAAAATTGGTATTGCGGTTTAAAGAGGAGCTCCAGAATCTGACGTCTGTGCTAAACGAACTCCAGGAGGAGATCGGCGCCTATGACTACGAGGAGCTACAAAACAGAGTGTCAAATCTTGAAGAGAGGCTTCGTGCATGCATGCAAAAATTAGCATGTGGGAAGCTGACAGGGATCAGTGATCCAATTACCATTAAGACGTCTGGATCAAGGTTTGGATCCTGGATGACTGACCCCCTGGCTCCTGAAGATGACACTAGGGTGTGGTACATGGATGGCTACCACAACAACCGATTTGTGCGGGAGTACAAGTCCATCTACGACTTCATGAATTCCGACAACTTTACATCTCACCGCCTCCCCCACCCATGGTCAGGCACTGGCCAGGTGGTCTACAACGGCTCCATCTACTTCAACAAGTTCCAGAGccacaccatcatcaagtttgacTTCAAGACCTCCGTCATCAGCAAGTCACGCCAGCTGGACTACGCCGGCTACAACAACATGTACCACTACTCCTGGGGCGGCCACTCAGACATCGACCTCATGGTGGACGAGGGCGGGCTCTGGGCCGTTTACGCCACCAATCAGAACGCAGGGAACATTGTCATCAGTAAACTGAACCCCAACACCCTGCAGATCATCAAGAGCTGGACTACCAACCACCCCAAGAGGAGCGCAGGAGAGGCCTTCATGATATGTGGCACGCTGTATGTCACCAATGGCTACTCCGGTGGGACCAAGGTCTATTATGCCTTCAGCACCAACTCGTCCACCTACGAGTACATTGACATACCGTTCCAGAATAAGTACTCTCACATCTCCATGCTGGACTATAACCCTAAAGACAGAGCACTGTACGCATGGAATAACGGTCACCAGGTGCTTTACAATGTCACCTTGTTCCACGTCATTCGGTCAGAGCAGGAGCAGTAGATAGCTAGCCATGCTGTTACCTTCTCAGTCACCGGCAGACCTGGGTTAAAATACTATTGGatatctttcaaatacttttaacATTTGCAgcagcctgcctggagtgccagatgggcagaGTTTGCAGTTTTGCAACAATTGTATTAATTCCATTATACCAGTCAAGCCTAATCAAGCCCGGCTAAATCAAGCaaatttgaacccaggtctggtccaCGGATGCTTCAAAGTAAAGGAGATACTATATGTAACTGTGGAAGGAGAGAAGTATCCTATATTTTAATCAGTAACAAGAAATACAGTACCTAATGATATATAATGTATAGAAACAAAGAGTAGAAAAGGAACCGAAAAGGTCATGCCTTTCTTGTTTTGGATGACTTCAAATGTCTTATAATGATTGTGTTTTTACGGAATTACCCACTCTTGACTTGTTTTTTATTTGATCACAGATAGTGCAGCCTATTGTATCATAGTTTTGAATTGAATTACATTTGGAAATGAAGAAAGTTTATATCCTGGGCCTTGTTTATCAACCTGTATAAAGCCAAACtgtagaacacaaacacacaatcatgACCATTTTCCCCAGGTGAGTGATCCTCATTTATTAATTAATTATATTACATGATCAGATGGTAAAGATGGTCAAATGTAGCAGCAATTTTCCATGTAACTCGATTCCCGCTTCTGTAAAGGTGGAGACTAGTGATCGTCCCAAAACACAGAGCCATGTGCAgaatagaaagccaattctatCCCCATGTGTTGGTAGCAAAATATCTAATTGGAAAATGTGTAATGGTACCTCAAAACATGTACTCAGTCTTTCCTGCGCAATACAACCTCTCAGGAACCAATATAACACAACCTGTCGTTTGCATGGAGTCATCTACACGGACATTATAGGATCTGATTATGATTGATAAAGGAGGCCCAATGGAGCACAGTTTCAAGAATCCAGTCAAACCACGAGTCAATGACAAAATACTGTATATCTGGGAACACTGACTACAGACTGTTGGAAGCACCCTGTTTCATTTCTGTGTCTTTGTGATGGTACAACATATTTTCTCTTTTTCTATCTTATTTTTGCATGGGCATTTTTACCGACCAAAATGGTTTTCTTCTCCGGATGTATTTTGCAATATTTGATGCTGTAGTGCAGGAGACTAGTTTAGCACTGTTAGGAGACAGGCTTTTTACTTTCTTATTGTCATTGGGGTTGATATATGTTCTTATTGTTGGAATTGATATTTACTGTGATAGCCTGTCTTTGTAGATTGGATTGTATTGACATAATTTGTCTAGCTCATATAGTTCTGtctggcaaaaaaatatataactagAACAATCACAAGAGAATGTACCAAACAATGTATCTATGAGCCAGTGACATACACACTGGCAGTTTTATTCCATTTGACTTCACAAGTCTACTGTCTGTTTCTTAGAGAGATCAATTGTGACATCTTATTCTGTTGAGCTTGCATATGTGTCGTATCTGCAATAAAATTCATATAAATGAACAAGATCTTTGTTCTA

Function

symbol description
olfm1 Predicted to enable amyloid-beta binding activity and identical protein binding activity. Involved in positive regulation of apoptotic process. Predicted to be located in several cellular components, including axonal growth cone; glutamatergic synapse; and neuronal cell body. Predicted to be part of AMPA glutamate receptor complex. Predicted to be extrinsic component of synaptic membrane.

NR:

description
noelin isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036979466.1 False 3250 mRNA 0.44 6 16637543 16654193
XM_036979467.1 False 1077 mRNA 0.45 4 16637544 16644582
XM_036979465.1 True 3761 mRNA 0.44 6 16639542 16654193
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118964846 NA coding upstream 462528 16168395 ~ 16175015 (+)
LOC110525313 LOC106585767 coding upstream 753753 15832500 ~ 15883790 (+)
LOC110525007 NA coding upstream 816453 15817450 ~ 15821090 (+)
LOC110525312 NA coding upstream 907264 15727497 ~ 15730287 (+)
LOC110525309 LOC106585763 coding upstream 1641866 14969490 ~ 14995677 (+)
slc2a6 slc2a6 coding downstream 96814 16751007 ~ 16762323 (+)
LOC110525325 LOC106585782 coding downstream 115197 16769390 ~ 16773568 (+)
fibcd1 LOC106585783 coding downstream 192553 16846746 ~ 16966187 (+)
traf1 LOC106585784 coding downstream 316641 16970834 ~ 16982251 (+)
phf19 LOC106585785 coding downstream 329623 16983816 ~ 17003233 (+)
G479562 NA non-coding upstream 9612 16627506 ~ 16627931 (+)
G479548 NA non-coding upstream 22048 16615091 ~ 16615495 (+)
G479543 NA non-coding upstream 25194 16612129 ~ 16612349 (+)
G479474 NA non-coding upstream 44072 16589273 ~ 16593471 (+)
G479442 NA non-coding upstream 110993 16525620 ~ 16526550 (+)
G479609 NA non-coding downstream 40258 16694451 ~ 16697287 (+)
G479678 NA non-coding downstream 76147 16730340 ~ 16730792 (+)
G479841 NA non-coding downstream 207152 16861345 ~ 16863923 (+)
G479896 NA non-coding downstream 312173 16966366 ~ 16966702 (+)
G479897 NA non-coding downstream 312547 16966740 ~ 16966978 (+)
G479239 NA other upstream 277792 16359416 ~ 16359751 (+)
G476248 NA other upstream 2621979 13997084 ~ 14015564 (+)
G476234 NA other upstream 2652284 13984840 ~ 13985259 (+)
G475692 NA other upstream 3323574 13313679 ~ 13313969 (+)
G474949 NA other upstream 3924245 12712306 ~ 12713298 (+)
dab2ipa LOC106585786 other downstream 446793 17016096 ~ 17126012 (+)
G480128 NA other downstream 666581 17320774 ~ 17321165 (+)
G480219 NA other downstream 790560 17444753 ~ 17445931 (+)
G480062 LOC106585661 other downstream 1063677 17717870 ~ 17718201 (+)

Expression

LOC110525319(olfm1) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 200.
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LOC110525319(olfm1) Expression in each Bioproject

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LOC110525319(olfm1) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 6000.
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Co-expression Network