dab2ipa (LOC106585786)


Basic Information

Item Value
gene id dab2ipa
gene name LOC106585786
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 17016096 ~ 17126012 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605356.2
GTGCCCTTAGCTGCTGTGCCCTTAGCTGCTGTGCCCCTTAGCTGCTGTGCCCCTAGCTGCTGTTGCCCCTGCATCGCAACCTGGTTGTGTAGAGGAGAAGGTGGCCGGCCATTGGTCAGGATCTCAGAGAACTGAAGTGAGAGGGATTCTGAGCTATGTTTTGTTTAGTGACCATATGATGaaaagggagagaagaagaaaaaacatgcTGTGTCTTTAAGAGCTGAGTAGCGAAAGCTGGCAGCCAGGCCCTGAGTTGAGCTCAACCCAATCATAGTCTTGGAACGGCTGCCAGATGTAGCGTAGCAGCAGCCAGAACACAGCAGAGCTGCCCCTGCAAAACTAGGCAGCGCTACTCACTGGGACAGGCGGGAGACGAGGATACGTTTCTGTGCCTCACTCGATTCTACAtcctcacgcacacacacgcacagtgctGGCAGAAAGGAGTATGCCTCATTCGGTGCTGTGAAGTTATGGAGTTGGACAACGCGGCCAAACCGGAGAGCTACAATGagCTCCCTCCTGAGAGGGTGGGTCGCAGGCGCAGCATGCCGGGCAGCGCTCTGGACAAATGCCCCTCCATGGAGCCGGCCACCTCTACCCCATTCAAAGTCACGggCTTCCTGAGCCGCCGACTAAAGGGCTCCATCAAACGCACCAAAAGCCAACCCAAGCTGGACCGCAACAGCAGCTTCAGAAACATCCTGCCGGGCTTCAAGACCACAGACAATGACAGATCCCATCTGATGCCGAGGCTGAAGGAATCGCGGTCTCACGAGTCGTTGCTCAGCCCCAGCAGTGCAGTAGAAGCTTTAGATCTCagcatggaggatgaggtgttGATCAAACCGGTGCACGGCAGCATCCTGGGCCAGGACTACTGCTTCGAGGTAACTACTTCCACTGGAACCAAATGCTTTTCGTGTCGGTCATCTGCCGAGAGGGACAAATGGATGGAAAACTTAAGGAGAGCTGTACATCCTAACAAAGACAACAGTCGGCGTGTGGAGAACCTTCTAAAATTGTGGATTATTGAGGCCAAGGACCTTCCAGCCAAGAAAAGGTATTTCTGTGAGTTGTGTCTGGACGACACGCTTTACGCACGGACTACCTGCAAATTCAAAATGGACAATGTATTCTGGGGAGAGCACTTTGAGTTCAACAACTTACCTTCCGTCAAAAGTGTCACTGTCCACCTGTACAAGGAGTCAGACAAAAAGAAAAAGAAGGACAAGAACAACTATGTGGGCCTGGTCAACATTCCCACCGGCGCCGTCACGGGACGCCAGTTTGTGGAGAAGTGGTATTCTGTGAGCACGCCCAACCCGAACAAAGGGAAAACTCCCGGACCTATGATTCGGCTCAAGTCGCGGTACCAGAGCATGAGTATCCTGCCCATGGAGTCATATAAGGAGTTTGCCGAGTACATCACCAATAACTACATGCTGCTGTGCTCCATCCTGGAGCCTGGCCTTAGTGTGAAGAACAAGGAGGAGATGGCCAGTGCCCTGGTTCACATCCTACAGAGCACCGGCAAGGCTAAGGACTTCCTGACTGACCTGATGATGTCAGAAGTGGATCGCTGTGGGGAGAACGAGCACCTGATCTTCAGGGAGAACACACTGGCCACCAAAGCCATTGAGGAGTACCTTAAACTGGTGGGGCAGAAGTACCTGCAGGACGCACTAGgagAGTTCATCAAAGCCCTGTACGAGTCAGACGAGAACTGCGAGGTGGACCCAGGGAAGTGTTCCTCAGGAGACCTCCCTGAGAACCAGAGCAACCTGAAGATGTGCTGTGAGCTGGCTTTCTGCAAGATCATCGACTCCTACCGTGTTTTTCCGCGGGAACTGAAGGAGGTGTTTGCCTCGTGGAGGCAGCAGTGCAGCAGTCGGGGCCGGCCGGACATCAGCGAGCGTCTGATCAGTGCCTCTCTGTTCCTGCGCTTCCTGTGTCCAGCCGTTATGTCCCCGTCACTTTTCAACCTGATGCAGGAGTATCCCGACGACCGCACCGCTCGCACCCTCACGCTCATCGCTAAGGTCACGCAGAACCTCGCCAACTTCACCAAGTTTGGTAACAAGGAGGAGTACATGTCCTTTATGAACCACTTCCTGGAGCACGAATGGACCAACATGCAGCGCTTCCTGTTGGAGATCTCCAACCCAGAGACCATCTCCAACACGGCAGGGTTCGAGGGTTACATCGACCTGGGCCGCGAGCTCTCATCCCTGCATTCCCTGCTGGCCGAGGATGTCTCTCAGCTGGATCAGAGCACAGCCTCTAAGCTGGGTCCCCTGGCCCGTATACTGCGGGACGTGAACTCTGCGCTGACCAACCCATCTGGGGTCCAGGTGTCCACCCCCACAGATGGCACgggctctcctcccctccccctcccattgGCAAGCTGTAGCCTCTCCACCGGCCTACCTCTTCACAAGATAGTCGTGGACAGCGAGCTCTCTGGGTTGGTGGATTTTACGAGGCTGCCGTCGCCAACCCCAGAGAACAAGGATATATTCTTTGTGACGAGGAACTCTGGCATCCAACAGTCTCCAGCCAGAAGCTCCAGCTACTCGGAGGCCAACGAGGCTGAGGTGCAGCTCCCCAACAGCAGCAAGAGTCTGTCCATGGTGGACCTGCAGGACAGCCGCAGCCTGGAGAGTACCCCTGGCCCCAGCCCTGGCTCCCCCAGCGACATGCTCTTCAATGACAGCCAGTCCCCCGTCACCCCTGGGCCTGGGGGTTGGGCCGCCCGCACCCCGCAGGGCATCATCCCCACTCCCGGCCCCGGACCCACTCTAAGGAGGACAGGTCAGACCCCTACCACCCCCAGCACAGAGAGCAGCACCCCAGGGAGGCCCACCCAGCTCCTGGCCCCGCTCTCCTTCCAGAACCCTGTTTACCAGATGGCCACGGGGATGACCATGAGCGTGTCCCCGCGGGGTCCCCTGGCTGACTCGGGCTCTGATGGCCACAGCTCCGTCAGCTCTCAGGGCAACAACACAGAGGACACCCCCAAGCATCCGGGGGTCTTCCTCACCCAGGGGGTGGCGGTCGGTAGTGGAGGAGGCAGTAGCAGTGAGTTTACCACCCGCCGCCAGCTGTCACTCGGGGAGCACCAGCCCAACGTGCCGCGGCAGAACAGCGCAGGCCCTCAGCGCAGAATAGACCAGCCCCCTCCGCCCGTCACCAGGGGCAGGACACCACCCAACATGCTCCAGACAGCCTACCCCGGTCCGCGGCCCTCCAGTGGCAGCATGATGTCATCATCCCCCGACTGGGGGCCCAGTGGCGGCAACCGTCTGAGACAGCAGTCGTCTTCGTCTAAAGGGGACAGTCCTGAGACCAAGCAGCGCACCATGCACAAAgCGTCCTCCCCTGTGAACCCCAATGCCCTGGACCGTACTGCTGCCTGGCTGTTGAATATGAATGTGCAGTATTTAGACCATGAGGGAGTTGACCCAGATACCAAGCACAGggaagacctcagaaacaaagaGGAGCTCACCCAGACTGAAAAGTACCAGCAGGAAATAGCCATCCTGCAGGACAGGCTGTGTCAGTCAGCCAAGAAGCTGGAGGAgtatgagtgtcatctgaaggGCCAGGACGAGCAGACCCAGACGATGCTGCTGGAGTACCAGGCGCGCCTGGAGGACACAGAGGAGCGTCTGAGCCGGCAGCAGGACGACAAGGAGCTCCAGATGAAGAGCATCATCACGAGGCTGATGTCAGTTGAGGAGGAATTGAAAAAAGATCATTCAGATATGCAGTCGATAGTGGACTCTAAACAGAAGATCATTGAAGCCCAGGAGAAACGCATCGCCTCTCTAGACGCGGCCAACGCCCGCCTGATGAGTGCTCTGACCCAGCTGAAGGAGCGCTACAGCATGCAGACCCGTAACGGCATCTCCCCCACCAAGCTCCAGATCACGGAGAACGGAGAGTTCAGGAACAGCAGCAACTgctagggaggggagagggagctaAGCCCAACTCAATGACACTTGGGCTGCGGGAGGGAGGAGGAACTACCAACACCCAGCCACTCTCCAGAGAAATAGATTTATACTGTCCAAATCCATTATTTTCAATGGATGTGGTCAGGATCACAGAAAGAAGGGCTAGCCACTGACTGAAACTGTTGCTTAAAAATATAAAGGACTTGATCAGATTCAATCAaaagtatttataaagccctccttacatcagctgattaaacaaagtgctgtacagaaccccagcctaaaaccccaaacagcaagcaatgcaggtttagaagcacagtggctaggaagaaacctagag
>XM_021605358.2
AGGAGACAgactgggaggggagggagggaagggggtgggaagagtggaggagggagggaagagagagagagggagggtaggagagCACAAGGCTAATAGCAGCTAGCAGAAGCCCACTGTGAAAGCTGAATGAGCACCACCACGCTCTCAGTAGAAAATGGAACTCTGAGACGGCTCCCTCATCATCCCCCACCTCTTCCACGCCCCCGTCCCCCCGCTCCGATTGTTTCCGGGGATTCTGATAGAATGTCTGATCCCATCTGATGCCGAGGCTGAAGGAATCGCGGTCTCACGAGTCGTTGCTCAGCCCCAGCAGTGCAGTAGAAGCTTTAGATCTCagcatggaggatgaggtgttGATCAAACCGGTGCACGGCAGCATCCTGGGCCAGGACTACTGCTTCGAGGTAACTACTTCCACTGGAACCAAATGCTTTTCGTGTCGGTCATCTGCCGAGAGGGACAAATGGATGGAAAACTTAAGGAGAGCTGTACATCCTAACAAAGACAACAGTCGGCGTGTGGAGAACCTTCTAAAATTGTGGATTATTGAGGCCAAGGACCTTCCAGCCAAGAAAAGGTATTTCTGTGAGTTGTGTCTGGACGACACGCTTTACGCACGGACTACCTGCAAATTCAAAATGGACAATGTATTCTGGGGAGAGCACTTTGAGTTCAACAACTTACCTTCCGTCAAAAGTGTCACTGTCCACCTGTACAAGGAGTCAGACAAAAAGAAAAAGAAGGACAAGAACAACTATGTGGGCCTGGTCAACATTCCCACCGGCGCCGTCACGGGACGCCAGTTTGTGGAGAAGTGGTATTCTGTGAGCACGCCCAACCCGAACAAAGGGAAAACTCCCGGACCTATGATTCGGCTCAAGTCGCGGTACCAGAGCATGAGTATCCTGCCCATGGAGTCATATAAGGAGTTTGCCGAGTACATCACCAATAACTACATGCTGCTGTGCTCCATCCTGGAGCCTGGCCTTAGTGTGAAGAACAAGGAGGAGATGGCCAGTGCCCTGGTTCACATCCTACAGAGCACCGGCAAGGCTAAGGACTTCCTGACTGACCTGATGATGTCAGAAGTGGATCGCTGTGGGGAGAACGAGCACCTGATCTTCAGGGAGAACACACTGGCCACCAAAGCCATTGAGGAGTACCTTAAACTGGTGGGGCAGAAGTACCTGCAGGACGCACTAGgagAGTTCATCAAAGCCCTGTACGAGTCAGACGAGAACTGCGAGGTGGACCCAGGGAAGTGTTCCTCAGGAGACCTCCCTGAGAACCAGAGCAACCTGAAGATGTGCTGTGAGCTGGCTTTCTGCAAGATCATCGACTCCTACCGTGTTTTTCCGCGGGAACTGAAGGAGGTGTTTGCCTCGTGGAGGCAGCAGTGCAGCAGTCGGGGCCGGCCGGACATCAGCGAGCGTCTGATCAGTGCCTCTCTGTTCCTGCGCTTCCTGTGTCCAGCCGTTATGTCCCCGTCACTTTTCAACCTGATGCAGGAGTATCCCGACGACCGCACCGCTCGCACCCTCACGCTCATCGCTAAGGTCACGCAGAACCTCGCCAACTTCACCAAGTTTGGTAACAAGGAGGAGTACATGTCCTTTATGAACCACTTCCTGGAGCACGAATGGACCAACATGCAGCGCTTCCTGTTGGAGATCTCCAACCCAGAGACCATCTCCAACACGGCAGGGTTCGAGGGTTACATCGACCTGGGCCGCGAGCTCTCATCCCTGCATTCCCTGCTGGCCGAGGATGTCTCTCAGCTGGATCAGAGCACAGCCTCTAAGCTGGGTCCCCTGGCCCGTATACTGCGGGACGTGAACTCTGCGCTGACCAACCCATCTGGGGTCCAGGTGTCCACCCCCACAGATGGCACgggctctcctcccctccccctcccattgGCAAGCTGTAGCCTCTCCACCGGCCTACCTCTTCACAAGATAGTCGTGGACAGCGAGCTCTCTGGGTTGGTGGATTTTACGAGGCTGCCGTCGCCAACCCCAGAGAACAAGGATATATTCTTTGTGACGAGGAACTCTGGCATCCAACAGTCTCCAGCCAGAAGCTCCAGCTACTCGGAGGCCAACGAGGCTGAGGTGCAGCTCCCCAACAGCAGCAAGAGTCTGTCCATGGTGGACCTGCAGGACAGCCGCAGCCTGGAGAGTACCCCTGGCCCCAGCCCTGGCTCCCCCAGCGACATGCTCTTCAATGACAGCCAGTCCCCCGTCACCCCTGGGCCTGGGGGTTGGGCCGCCCGCACCCCGCAGGGCATCATCCCCACTCCCGGCCCCGGACCCACTCTAAGGAGGACAGGTCAGACCCCTACCACCCCCAGCACAGAGAGCAGCACCCCAGGGAGGCCCACCCAGCTCCTGGCCCCGCTCTCCTTCCAGAACCCTGTTTACCAGATGGCCACGGGGATGACCATGAGCGTGTCCCCGCGGGGTCCCCTGGCTGACTCGGGCTCTGATGGCCACAGCTCCGTCAGCTCTCAGGGCAACAACACAGAGGACACCCCCAAGCATCCGGGGGTCTTCCTCACCCAGGGGGTGGCGGTCGGTAGTGGAGGAGGCAGTAGCAGTGAGTTTACCACCCGCCGCCAGCTGTCACTCGGGGAGCACCAGCCCAACGTGCCGCGGCAGAACAGCGCAGGCCCTCAGCGCAGAATAGACCAGCCCCCTCCGCCCGTCACCAGGGGCAGGACACCACCCAACATGCTCCAGACAGCCTACCCCGGTCCGCGGCCCTCCAGTGGCAGCATGATGTCATCATCCCCCGACTGGGGGCCCAGTGGCGGCAACCGTCTGAGACAGCAGTCGTCTTCGTCTAAAGGGGACAGTCCTGAGACCAAGCAGCGCACCATGCACAAAgCGTCCTCCCCTGTGAACCCCAATGCCCTGGACCGTACTGCTGCCTGGCTGTTGAATATGAATGTGCAGTATTTAGACCATGAGGGAGTTGACCCAGATACCAAGCACAGggaagacctcagaaacaaagaGGAGCTCACCCAGACTGAAAAGTACCAGCAGGAAATAGCCATCCTGCAGGACAGGCTGTGTCAGTCAGCCAAGAAGCTGGAGGAgtatgagtgtcatctgaaggGCCAGGACGAGCAGACCCAGACGATGCTGCTGGAGTACCAGGCGCGCCTGGAGGACACAGAGGAGCGTCTGAGCCGGCAGCAGGACGACAAGGAGCTCCAGATGAAGAGCATCATCACGAGGCTGATGTCAGTTGAGGAGGAATTGAAAAAAGATCATTCAGATATGCAGTCGATAGTGGACTCTAAACAGAAGATCATTGAAGCCCAGGAGAAACGCATCGCCTCTCTAGACGCGGCCAACGCCCGCCTGATGAGTGCTCTGACCCAGCTGAAGGAGCGCTACAGCATGCAGACCCGTAACGGCATCTCCCCCACCAAGCTCCAGATCACGGAGAACGGAGAGTTCAGGAACAGCAGCAACTgctag
>TU545405
GGGAAAACTCCCGGACCTATGATTCGGCTCAAGTCGCGGTACCAGAGCATGAGTATCCTGCCCATGGAGTCATATAAGGAGTTTGCCGAGTACATCACCAATAACTACATGCTGCTGTGCTCCATCCTGGAGCCTGGCCTTAGTGTGAAGAACAAGGAGGAGATGGCCAGTGCCCTGGTTCACATCCTACAGAGCACCGGCAAGGCTAAGGACTTCCTGACTGACCTGATGATGTCAGAAGTGGATCGCTGTGGGGAGAACGAGCACCTGATCTTCAGGGAGAACACACTGGCCACCAAAGCCATTGAGGAGTACCTTAAACTGGTGGGGCAGAAGTACCTGCAGGACGCACTAGgagAGTTCATCAAAGCCCTGTACGAGTCAGACGAGAACTGCGAGGTGGACCCAGGGAAGTGTTCCTCAGGAGACCTCCCTGAGAACCAGAGCAACCTGAAGATGTGCTGTGAGCTGGCTTTCTGCAAGATCATCGACTCCTACCGTGTTTTTCCGCGGGAACTGAAGGAGGTGTTTGCCTCGTGGAGGCAGCAGTGCAGCAGTCGGGGCCGGCCGGACATCAGCGAGCGTCTGATCAGTGCCTCTCTGTTCCTGCGCTTCCTGTGTCCAGCCGTTATGTCCCCGTCACTTTTCAACCTGATGCAGGAGTATCCCGACGACCGCACCGCTCGCACCCTCACGCTCATCGCTAAGGTCACGCAGAACCTCGCCAACTTCACCAAgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605356.2 False 4317 mRNA 0.56 16 17016096 17126012
XM_021605358.2 False 3494 mRNA 0.57 14 17085116 17125675
TU545405 True 739 TUCP 0.56 4 17100986 17107427

Neighbor

gene id symbol gene type direction distance location
phf19 LOC106585785 coding upstream 12863 16983816 ~ 17003233 (+)
traf1 LOC106585784 coding upstream 33845 16970834 ~ 16982251 (+)
fibcd1 LOC106585783 coding upstream 49909 16846746 ~ 16966187 (+)
LOC110525325 LOC106585782 coding upstream 242528 16769390 ~ 16773568 (+)
slc2a6 slc2a6 coding upstream 253773 16751007 ~ 16762323 (+)
LOC118964847 NA coding downstream 943 17126955 ~ 17131300 (+)
med27 med27 coding downstream 99553 17225565 ~ 17318854 (+)
LOC110525335 LOC106585645 coding downstream 234740 17360752 ~ 17412856 (+)
LOC110525341 LOC106585648 coding downstream 362576 17488588 ~ 17496137 (+)
LOC110525345 NA coding downstream 400286 17526298 ~ 17534335 (+)
G479823 NA non-coding upstream 45704 16969569 ~ 16970392 (+)
G479897 NA non-coding upstream 49118 16966740 ~ 16966978 (+)
G479896 NA non-coding upstream 49394 16966366 ~ 16966702 (+)
G479841 NA non-coding upstream 152173 16861345 ~ 16863923 (+)
G479678 NA non-coding upstream 285304 16730340 ~ 16730792 (+)
G480058 NA non-coding downstream 193038 17319050 ~ 17319198 (+)
G480126 NA non-coding downstream 194023 17320035 ~ 17320254 (+)
G480134 NA non-coding downstream 197693 17323705 ~ 17323942 (+)
G480138 NA non-coding downstream 202506 17328518 ~ 17328718 (+)
G480139 NA non-coding downstream 202739 17328751 ~ 17328972 (+)
G479239 NA other upstream 656345 16359416 ~ 16359751 (+)
G476248 NA other upstream 3000532 13997084 ~ 14015564 (+)
G476234 NA other upstream 3030837 13984840 ~ 13985259 (+)
G475692 NA other upstream 3702127 13313679 ~ 13313969 (+)
G480128 NA other downstream 194762 17320774 ~ 17321165 (+)
G480219 NA other downstream 318741 17444753 ~ 17445931 (+)
G480062 LOC106585661 other downstream 591858 17717870 ~ 17718201 (+)
LOC110525363 LOC106585667 other downstream 788748 17914750 ~ 17980989 (+)
G481201 NA other downstream 1158785 18284797 ~ 18285312 (+)
G479966 NA non-coding upstream 2027 17097964 ~ 17098959 (+)

Expression


Co-expression Network