endog (endog)


Basic Information

Item Value
gene id endog
gene name endog
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 17133840 ~ 17135672 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605359.2
GCTACTGAAAGCGTCATATCCATGCGCCCATTCCATAACAGCAAGTATTGAAAAAGAAACGAGCATGTGGAAATGTGTGATATGAAATTAACTTTTTATGTAGCTGATTGTTGAAAAAGCGGTAACGACTTGGTAATAGTTTGTGGTAATTATTCCGGTGCATAAAATGTATCGTGTTATCTGTTCTAAGTGGTTTATCTCCGGCGTGTCCTTGACTGTGGGAGCGGCTATTGGTGCGTCTCTGAATGGAGATTCGACGAATAGATGCATAAATCCGAGCCAAGGATTACTCAATCGAGTACCCGTTATTCCTATTCCAAGTGTGGACGCAGCAACCGACCTTACCACGTACCAAGGAGGCGGTCAAATGGTAGGGTCCCGATCAACAGCTGCAATGAAGTACGGCTTCCCATCTCTCGCCAATATCAAGACGAGGGAGTCCTACGTGACATCTTATGATCCCAGAAACAGGACTGCTGCATGGGTTATAGAGCAACTCAGTCCTGATGGCTTGACAGGACCTTCAGATAGGAAATTTTGCGACTTTAAAGAGGATGATACGGTGCACGTATACCACAGGGCTACCAATGCAGACTACAGAGGCAGTGGATTTGACAGGGGGCATTTGGCAGCAGCTGCCAATCACAAATGGAATCAAAAGGCAATGGATGACACGTTCTATCTCAGTAATGTCTCACCACAGAACCCAAATTTAAATCAAAATGCATGGAACAACTTGGAGCAGTACTGCCGTTCACTTACCAAGCACTacatgaatgtgtttgtgtgcacggGACCACTTTATCTGCCCAGACAGGAACCAGATGGGAAAATGTATGTGAAGTACCAGGTGATGGGGAGGAACCATGTGGCGGTCCCCACCCATTTCTTCAAGGTGGTGATCCTGGAGAagcagaggggagaggtggagctGCGCTCGTATGTGATGCCCAACACACCTGTGGATAACAAGATTCCTCTGGAGCGCTTCCTGGTGCCCATCGAGAGCATTGAGAGAGCCTCAGGACTGCTCTTTGTACCCAACATTATGAAGAGGACAAACAGCCTGCTGGCTATCACTGCTGGAGGCAAATGAGTCTGGTCAGCTCTGTGTAGTGTGGTGGGTCtggttcattagggcacactgtagcaaaaatGTTAGAAttgaaaacaaacattttcatTGGACAGTACTGACCCGTTTCACTCTATTTTTAAGTTTACTTTCATTTTTGTCTGCTGAACACAACCATGGTCATTCAGCTCTGTGTCGTGTGATGACCATCCTCAGTAAGGTTTACATGTGACTGCACCAAACCCATCTGCTTTATCAATGTAGTGCTTATCTTGCATTGAATTAAACAATAAGGGAAACAATCCAATTATTGTCCAGTAGGATGTGATGCTAATAAATATTTAGGAGCATTAGACTA

Function

symbol description
endog Predicted to enable endoribonuclease activity and single-stranded DNA endodeoxyribonuclease activity. Predicted to be involved in apoptotic DNA fragmentation. Predicted to be active in mitochondrial inner membrane and nucleus. Orthologous to human ENDOG (endonuclease G).

NR:

description
endonuclease G, mitochondrial

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K01173 ENDOG; endonuclease G, mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605359.2 True 1433 mRNA 0.45 3 17133840 17135672

Neighbor

gene id symbol gene type direction distance location
LOC110525323 stkld1 coding downstream 394743 16730789 ~ 16739097 (-)
LOC110525322 LOC106585778 coding downstream 403768 16707256 ~ 16730072 (-)
LOC110525321 cssa24h9orf116 coding downstream 439435 16685793 ~ 16694405 (-)
LOC110525318 rxra coding downstream 559691 16538121 ~ 16574149 (-)
LOC110525107 LOC100500787 coding downstream 847490 16174779 ~ 16286350 (-)
LOC110525108 NA coding upstream 749 17136421 ~ 17137306 (-)
ntng2a LOC106585788 coding upstream 6675 17142347 ~ 17224680 (-)
LOC110525333 NA coding upstream 9574 17145246 ~ 17152447 (-)
LOC110525337 NA coding upstream 281557 17417229 ~ 17424019 (-)
ccdc180 ccdc180 coding upstream 297409 17433081 ~ 17443676 (-)
G480460 LOC106585785 non-coding downstream 141135 16988827 ~ 16992705 (-)
G480449 LOC106585784 non-coding downstream 151311 16978949 ~ 16982529 (-)
G480445 NA non-coding downstream 164493 16968916 ~ 16969347 (-)
G480444 NA non-coding downstream 165035 16968507 ~ 16968805 (-)
G479815 LOC100194703 non-coding downstream 293101 16840516 ~ 16840739 (-)
G480565 LOC106585788 non-coding upstream 6719 17142391 ~ 17171981 (-)
G480618 med27 non-coding upstream 89937 17225609 ~ 17270021 (-)
G480626 NA non-coding upstream 127580 17263252 ~ 17301553 (-)
G480685 NA non-coding upstream 187913 17323585 ~ 17323872 (-)
G480687 NA non-coding upstream 190357 17326029 ~ 17326311 (-)
G479533 NA other downstream 540069 16589272 ~ 16593771 (-)
G478734 NA other downstream 1250330 15881636 ~ 15883510 (-)
G478730 LOC106585767 other downstream 1262042 15869799 ~ 15871798 (-)
G478643 NA other downstream 1404257 15727490 ~ 15730279 (-)
git2a LOC106585671 other upstream 921539 18056651 ~ 18084926 (-)
LOC110525370 LOC106585675 other upstream 988425 18121017 ~ 18139654 (-)
G482323 NA other upstream 1821814 18957486 ~ 18963891 (-)
G482483 NA other upstream 2055460 19191132 ~ 19191457 (-)
G482658 NA other upstream 2174751 19310423 ~ 19310993 (-)

Expression

endog(endog) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 30.
End of interactive chart.

endog(endog) Expression in each Bioproject

Bar chart with 21 bars.
endog(endog) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network