Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110525350 |
| gene name | LOC106585656 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 17636968 ~ 17643111 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| P2X purinoceptor 2-like |
| id | name | namespace |
|---|---|---|
| GO:0034220 | ion transmembrane transport | biological_process |
| GO:0035590 | purinergic nucleotide receptor signaling pathway | biological_process |
| GO:0006812 | cation transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004931 | extracellularly ATP-gated cation channel activity | molecular_function |
| GO:0001614 | purinergic nucleotide receptor activity | molecular_function |
| id | description |
|---|---|
| K05216 | P2RX2; P2X purinoceptor 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021605385.2 | True | 1824 | mRNA | 0.45 | 12 | 17636968 | 17643111 |
17,634,000
17,635,000
17,636,000
17,637,000
17,638,000
17,639,000
17,640,000
17,641,000
17,642,000
17,643,000
17,644,000
17,645,000
17,646,000
17,647,000
17,648,000
17,649,000
17,650,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525345 | NA | coding | upstream | 102633 | 17526298 ~ 17534335 (+) |
| LOC110525341 | LOC106585648 | coding | upstream | 140831 | 17488588 ~ 17496137 (+) |
| LOC110525335 | LOC106585645 | coding | upstream | 224112 | 17360752 ~ 17412856 (+) |
| med27 | med27 | coding | upstream | 318114 | 17225565 ~ 17318854 (+) |
| LOC118964847 | NA | coding | upstream | 505668 | 17126955 ~ 17131300 (+) |
| LOC110525352 | LOC106585658 | coding | downstream | 13955 | 17657066 ~ 17715306 (+) |
| LOC118964848 | NA | coding | downstream | 76398 | 17719509 ~ 17721149 (+) |
| LOC110525354 | LOC106585663 | coding | downstream | 95433 | 17738544 ~ 17764617 (+) |
| LOC110525357 | LOC106585662 | coding | downstream | 131575 | 17774686 ~ 17789072 (+) |
| aldh3b2 | LOC106585664 | coding | downstream | 147154 | 17790265 ~ 17800900 (+) |
| G480330 | pesc | non-coding | upstream | 11312 | 17624762 ~ 17625656 (+) |
| G480327 | NA | non-coding | upstream | 17806 | 17614051 ~ 17619162 (+) |
| G480320 | NA | non-coding | upstream | 36006 | 17600763 ~ 17600962 (+) |
| G480319 | NA | non-coding | upstream | 37067 | 17599652 ~ 17599901 (+) |
| G480318 | NA | non-coding | upstream | 39385 | 17597313 ~ 17597583 (+) |
| G480344 | NA | non-coding | downstream | 8499 | 17651610 ~ 17651908 (+) |
| G480064 | foxn4 | non-coding | downstream | 75394 | 17718505 ~ 17719296 (+) |
| G480929 | NA | non-coding | downstream | 87154 | 17730265 ~ 17730473 (+) |
| G480931 | NA | non-coding | downstream | 88628 | 17731739 ~ 17731952 (+) |
| G480219 | NA | other | upstream | 191037 | 17444753 ~ 17445931 (+) |
| G480128 | NA | other | upstream | 315803 | 17320774 ~ 17321165 (+) |
| dab2ipa | LOC106585786 | other | upstream | 529541 | 17016096 ~ 17126012 (+) |
| traf1 | LOC106585784 | other | upstream | 654748 | 16970834 ~ 16982251 (+) |
| G479239 | NA | other | upstream | 1277217 | 16359416 ~ 16359751 (+) |
| G480062 | LOC106585661 | other | downstream | 74759 | 17717870 ~ 17718201 (+) |
| LOC110525363 | LOC106585667 | other | downstream | 271649 | 17914750 ~ 17980989 (+) |
| G481201 | NA | other | downstream | 641686 | 18284797 ~ 18285312 (+) |
| G481205 | NA | other | downstream | 647122 | 18290233 ~ 18290467 (+) |
| G481159 | NA | other | downstream | 692221 | 18335332 ~ 18340566 (+) |
