LOC110525350 (LOC106585656)


Basic Information

Item Value
gene id LOC110525350
gene name LOC106585656
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 17636968 ~ 17643111 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605385.2
TCTGAACAGACAGCTGATAAACTCAGAAATCACAATGGGACTGCTTCAGTTTATAAAGGATTATTTTATTGGTTTCTTGGACTATGAGACCCCCAAGGTAATGGTggttaaaaacaaaaaacttGGAGTCATATATAGAGGGGTTCAGTTTTTTGTGATCACCTATTTTATCTGGTATGTCTTTATCAGTCAGAAAGCCTATCAGGACAGTGAGACGAGGCCAGAGAACTCAGTCTACACTAAGATGAAAGGCACAGCCCTGCAGGGGGACCACGTTCTGGACATGGTAGAATACGTCCGACCCTCAGAGGGCGGTGACGTGATCAGCACAATACTGAGACGAGTGGTCACACACAACCAGAGGCAAGGCACGTGTGCTGAGCATTTTACCGTTCCCAATGCCAACTGCTCAAAGGACTCGGACTGCAACTCAGGAAAAGTGGACTTTGATGGCAATGGACAGAGAACTGGGCGCTGTGTTCCTTACTATAACCAGACCTTCAAGACCTGTGAGATTCAGACCTGGTGTCCTATTGAGGACTATGCGGCAATACGGGAGCCACCATTAGCAGAGGCCATCAATTTCACTGTTTACATCAAGAATGCCATCCATTTCCCCAAATTTAAAGTGTTGAGAGGAAACATCAAACCAAACAAACGAAATGGGCAGAAATATCTGAATAAGTGTCATTACAATGAGGAGAAACACCCCTACTGCCCCATCTTCCGGCTGGGTTACATCGCAGAACAGGCCAGGGAGAAGTTCAGCGAGCTTTGCAGGACTGGGGGAGTGATTGGTGTCTTCATTAACTGGAAGTGTGATCTTGACCTGGACCCCTCGGAGTGTAAACCCACATACTCATTCCGTCGCCTGGACCTTCGGAAGAACCTGCCCAGCTCTGGTTACAACTTCAGATTTGCCAAGTATTACAGCAAAGATGGAGAAGAGTTCCGGACACTTATCAAGGCCTTTGGGATTCGTCTTGATGTAATAGTTCATGGAAATGCTGGACGATTCAGCATAATCCCAACTATCATCAACACAGTGACAGCCATGACCTCAGTTGGAATATGTTCCATTATCTGTGACTGGATCATGCTCACTTTCATTGACAAGAATGATATCTACAGTGGCAGAAAGTTTGATGATGACAGTAAAGTTCCCAAACCCAGCCAGACCTTCACACTTCCCACAGAATTCACCATCATCAGCTATGGCTCCACCCACTCTGACCTGTCAGAGGGAGTGGCCCTGTGACATCCCATCCCCACAGTGCCCTCTGGTCACATCAGTCTTTGGCCACATGCATGGATGATGTTCTTCCTCAGACACCTGACTGCTGATCAGGCGGATGGGACAGACAGACGACCTTTCCCCCCCAAGCAGTCTCAGATGTCCTCAGAGAGACCTCCTTGATGGGTCAACCTCTGTCCCTGCGGGATTTAACTGAAAGACAGCTAAGACCACTAAAACATCCTACTTAGTTAGAGTGCCACCAGTTCTTTCACTAAAAGCAATTTCCTATGATGAATTAGTGTAAATCTTTTATGAAAATTCCTGTTGATTCAGGAAATGAATTAAACTCCAATGGAGAAATTCCATGTTCAGTTCAACTGACAGGGACTGAAATGGTACTGACCCCAACTGAATCTCAAATAATTGCAAATGATCAGAATTTAATCCAACCAATGAAAAATAAACTAAATAAGTTATCGCAATCAGCTAAACGTGTTGGAGTACATTATGCTGAGAACCCTCTTTTCCTGTCTACCCTGAACCAGGTCAATAACTGTATAAGCTATACATGCAAACACAACAATAAA

Function

NR:

description
P2X purinoceptor 2-like

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0035590 purinergic nucleotide receptor signaling pathway biological_process
GO:0006812 cation transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0004931 extracellularly ATP-gated cation channel activity molecular_function
GO:0001614 purinergic nucleotide receptor activity molecular_function

KEGG:

id description
K05216 P2RX2; P2X purinoceptor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605385.2 True 1824 mRNA 0.45 12 17636968 17643111

Neighbor

gene id symbol gene type direction distance location
LOC110525345 NA coding upstream 102633 17526298 ~ 17534335 (+)
LOC110525341 LOC106585648 coding upstream 140831 17488588 ~ 17496137 (+)
LOC110525335 LOC106585645 coding upstream 224112 17360752 ~ 17412856 (+)
med27 med27 coding upstream 318114 17225565 ~ 17318854 (+)
LOC118964847 NA coding upstream 505668 17126955 ~ 17131300 (+)
LOC110525352 LOC106585658 coding downstream 13955 17657066 ~ 17715306 (+)
LOC118964848 NA coding downstream 76398 17719509 ~ 17721149 (+)
LOC110525354 LOC106585663 coding downstream 95433 17738544 ~ 17764617 (+)
LOC110525357 LOC106585662 coding downstream 131575 17774686 ~ 17789072 (+)
aldh3b2 LOC106585664 coding downstream 147154 17790265 ~ 17800900 (+)
G480330 pesc non-coding upstream 11312 17624762 ~ 17625656 (+)
G480327 NA non-coding upstream 17806 17614051 ~ 17619162 (+)
G480320 NA non-coding upstream 36006 17600763 ~ 17600962 (+)
G480319 NA non-coding upstream 37067 17599652 ~ 17599901 (+)
G480318 NA non-coding upstream 39385 17597313 ~ 17597583 (+)
G480344 NA non-coding downstream 8499 17651610 ~ 17651908 (+)
G480064 foxn4 non-coding downstream 75394 17718505 ~ 17719296 (+)
G480929 NA non-coding downstream 87154 17730265 ~ 17730473 (+)
G480931 NA non-coding downstream 88628 17731739 ~ 17731952 (+)
G480219 NA other upstream 191037 17444753 ~ 17445931 (+)
G480128 NA other upstream 315803 17320774 ~ 17321165 (+)
dab2ipa LOC106585786 other upstream 529541 17016096 ~ 17126012 (+)
traf1 LOC106585784 other upstream 654748 16970834 ~ 16982251 (+)
G479239 NA other upstream 1277217 16359416 ~ 16359751 (+)
G480062 LOC106585661 other downstream 74759 17717870 ~ 17718201 (+)
LOC110525363 LOC106585667 other downstream 271649 17914750 ~ 17980989 (+)
G481201 NA other downstream 641686 18284797 ~ 18285312 (+)
G481205 NA other downstream 647122 18290233 ~ 18290467 (+)
G481159 NA other downstream 692221 18335332 ~ 18340566 (+)

Expression


Co-expression Network