LOC110525403 (LOC106585349)


Basic Information

Item Value
gene id LOC110525403
gene name LOC106585349
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 19295238 ~ 19304130 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605474.2
GGGCTGCACCACTCCTAGGTGGGGTTTTTcatgtatataaatatatgagTGCATCTTCCCAAGGCCCATGCAATCTGTCTGAGAAGTTTCACAGTCCCTACCTTTGTCTAGCTGACGTTTGCCACCATGTCCTTCTTGCAGCAGACCATCTATCTGGGCATGGCAGATGAGTCGACCTTACTCAATCAGGGCACTGTGACTCCCTACCCACATTTCAGTGCCGATGGGGATGCAGGCATCTTGGATAAGGCCATCAAGGCCAAAGGTGTAGATGAGAACACCATCATTGATGTGCTGGTGAAGAGGAGCAACGCCCAGAGACAGCAGATCAAAGCTAGCTACCAAAAGGCTAGTGGCAAGCCTCTGGAGACTGCCCTGAAGTCGGCCCTAAATGGAGAGCTGGAGGATGTGGTTCTGGCACTGCTCAAAACGCCAGCCCAATATGACGCCCAACAGCTCAGACTGGCCATGAAGGGATTGGGCACAGATGAGGATACTCTGATTGAGATTCTGGCCTCCAGGACCAATAAAGAGATCAAAGAGATAAAGAAAGCCTATCAGGAAGAATACAAAAACGAGCTGCAGAATGACATCAAGTCTGACACAGGCGGAGACTTCAGAAATGCTCTGCTCTCGCTctgcaaggctactaGGAATGAGGACATCATCGTGAACCAGGAACTTGCTGAAAGTGATGCCAAGGCCCTGTATGAGgctggagagaagaagaagggaaCGGACTGCTCTGTCTTCATAGACATTCTGACCACCAGAAGTGCTCCTCAGCTCCGCCAAGcgttTGAGAAGTACTTCAAGTACAGTAAGGTGGATGTGACAAAGGCTATCGACCTGGAACTGAAGGGAGACATTGAGAACTGTCTGACTGCCGTAGTGAAATGTGCTGGAAGCAAGCCTGCTTTCTTTGCTGAGAGACTCAACTTGGCCATGAAGGATAAAGGAACCAGGACCAAGATTCTGACCCGTGTCATGGTGAGCCGTTCTGAAGTGGACATGGCCCGGATCAAACAGGAGTACAAGAAGACGTTTGGGAAAACCCTCTACCAGGACATTCTGAATGACACCAATGGCGACTATGAGAAGATCCTACTGGCCTTGTGTGGAAGTGACAGCtaactttctctcctctctcacctagCAAGAATGGCATTCACACCATTTTAGAAAACTGTACACGAGGAAACATTCCCCTCCAATGCCTCAATGTGCACTTCCCAAAATGCAAAATATAATGGTTCATGACAACTATCTGAAATGGCAGTCCTGATGTATTTTCGGCTAAATGCTAACAGCAATAAGCACAGTTAGCATGTTAAGCAGCATTGCATAATTTAGCCTAGCTTCAGCAGACTTGGTGATCTATTCCATAGTGCAATATATCACACACTTAACCATTTGTGTGCCAAGAATATACAGTGGCATTGTACCCTGGTTGAATAACTGGTCCTTTGTGAAAATAAAGCTTTTTATGTGGATCCAAA
>XM_021605472.2
atatatgagTGCATCTTCCCAAGGCCCATGCAATCTGTCTGAGAAGTTTCACAGTCCCTACCTTTGTCTAGCTGGTAAGATATCCCTTTTTTTTATTCAATAGACCTTCTCCAGGAAATTGAGCATCTCGACTTCCAATTCTAGACGTTTGCCACCATGTCCTTCTTGCAGCAGACCATCTATCTGGGCATGGCAGATGAGTCGACCTTACTCAATCAGGGCACTGTGACTCCCTACCCACATTTCAGTGCCGATGGGGATGCAGGCATCTTGGATAAGGCCATCAAGGCCAAAGGTGTAGATGAGAACACCATCATTGATGTGCTGGTGAAGAGGAGCAACGCCCAGAGACAGCAGATCAAAGCTAGCTACCAAAAGGCTAGTGGCAAGCCTCTGGAGACTGCCCTGAAGTCGGCCCTAAATGGAGAGCTGGAGGATGTGGTTCTGGCACTGCTCAAAACGCCAGCCCAATATGACGCCCAACAGCTCAGACTGGCCATGAAGGGATTGGGCACAGATGAGGATACTCTGATTGAGATTCTGGCCTCCAGGACCAATAAAGAGATCAAAGAGATAAAGAAAGCCTATCAGGAAGAATACAAAAACGAGCTGCAGAATGACATCAAGTCTGACACAGGCGGAGACTTCAGAAATGCTCTGCTCTCGCTctgcaaggctactaGGAATGAGGACATCATCGTGAACCAGGAACTTGCTGAAAGTGATGCCAAGGCCCTGTATGAGgctggagagaagaagaagggaaCGGACTGCTCTGTCTTCATAGACATTCTGACCACCAGAAGTGCTCCTCAGCTCCGCCAAGcgttTGAGAAGTACTTCAAGTACAGTAAGGTGGATGTGACAAAGGCTATCGACCTGGAACTGAAGGGAGACATTGAGAACTGTCTGACTGCCGTAGTGAAATGTGCTGGAAGCAAGCCTGCTTTCTTTGCTGAGAGACTCAACTTGGCCATGAAGGATAAAGGAACCAGGACCAAGATTCTGACCCGTGTCATGGTGAGCCGTTCTGAAGTGGACATGGCCCGGATCAAACAGGAGTACAAGAAGACGTTTGGGAAAACCCTCTACCAGGACATTCTGAATGACACCAATGGCGACTATGAGAAGATCCTACTGGCCTTGTGTGGAAGTGACAGCtaactttctctcctctctcacctagCAAGAATGGCATTCACACCATTTTAGAAAACTGTACACGAGGAAACATTCCCCTCCAATGCCTCAATGTGCACTTCCCAAAATGCAAAATATAATGGTTCATGACAACTATCTGAAATGGCAGTCCTGATGTATTTTCGGCTAAATGCTAACAGCAATAAGCACAGTTAGCATGTTAAGCAGCATTGCATAATTTAGCCTAGCTTCAGCAGACTTGGTGATCTATTCCATAGTGCAATATATCACACACTTAACCATTTGTGTGCCAAGAATATACAGTGGCATTGTACCCTGGTTGAATAACTGGTCCTTTGTGAAAATAAAGCTTTTTATGTGGATCCAAA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0043086 negative regulation of catalytic activity biological_process
GO:0005509 calcium ion binding molecular_function
GO:0005544 calcium-dependent phospholipid binding molecular_function
GO:0004859 phospholipase inhibitor activity molecular_function

KEGG:

id description
K17091 ANXA1; annexin A1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605474.2 False 1499 mRNA 0.47 13 19295238 19304130
XM_021605472.2 True 1529 mRNA 0.47 13 19295278 19304130

Neighbor

gene id symbol gene type direction distance location
LOC110525400 LOC106585702 coding upstream 272318 18975768 ~ 19022920 (+)
LOC118964850 NA coding upstream 320945 18972352 ~ 18974293 (+)
LOC110525399 LOC106585699 coding upstream 331351 18957394 ~ 18963887 (+)
LOC110525398 ostf1 coding upstream 352665 18925149 ~ 18942573 (+)
LOC110525396 LOC106585698 coding upstream 375646 18895916 ~ 18919592 (+)
LOC110525111 NA coding downstream 43678 19347808 ~ 19349023 (+)
LOC110525406 LOC106585353 coding downstream 155901 19460031 ~ 19469464 (+)
LOC110525411 f108b coding downstream 199511 19503641 ~ 19539094 (+)
LOC110525412 LOC106585357 coding downstream 231796 19535926 ~ 19573442 (+)
LOC110525413 LOC106585358 coding downstream 368253 19672383 ~ 19828744 (+)
G482603 NA non-coding upstream 8258 19286337 ~ 19286980 (+)
G482599 NA non-coding upstream 13756 19280928 ~ 19281482 (+)
G482590 NA non-coding upstream 19584 19275369 ~ 19275654 (+)
G482549 NA non-coding upstream 37935 19257079 ~ 19257303 (+)
G482548 NA non-coding upstream 38397 19256585 ~ 19256841 (+)
G482615 NA non-coding downstream 10805 19314935 ~ 19322851 (+)
G482625 NA non-coding downstream 21352 19325482 ~ 19325717 (+)
G482635 NA non-coding downstream 36654 19340784 ~ 19341012 (+)
G482616 NA non-coding downstream 54414 19358544 ~ 19358790 (+)
G482694 NA non-coding downstream 67369 19371499 ~ 19372103 (+)
G482551 LOC106585704 other upstream 35630 19259149 ~ 19259608 (+)
G482000 NA other upstream 437082 18857627 ~ 18858156 (+)
G481159 NA other upstream 954672 18335332 ~ 18340566 (+)
G481205 NA other upstream 1004771 18290233 ~ 18290467 (+)
G481201 NA other upstream 1009926 18284797 ~ 18285312 (+)
LOC110525429 NA other downstream 1230379 20533279 ~ 20537508 (+)
LOC110525431 LOC106585378 other downstream 1296688 20591803 ~ 20603188 (+)
G483669 LOC106585393 other downstream 1498646 20802776 ~ 20803806 (+)
LOC110525116 adamtsl2 other downstream 1654625 20958755 ~ 20984618 (+)
G484674 NA other downstream 2160009 21464139 ~ 21466905 (+)

Expression


Co-expression Network