yee9 (yee9)


Basic Information

Item Value
gene id yee9
gene name yee9
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 20477833 ~ 20479230 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001160515.1
GATGCCATACATTTAGGCAACGTCATAAGGAAATACTTGAAGCTGTTAACGTCAGCTAACACGTTACAGATATGGCGTTTACATTATATTCCCTTATTCAAGCGGTGATTTTGTGTGTAAATGCTGTCGCCGTATTGCACGAAGAAAGATTTTTAAGTAAAATTGGCTGGGGTGTGGACCAAAGTATTGGGGGATTTGGTGATGAACCGGGCATTAAAGTGCAGCTAATGAACCTTGTCCGCTCTGTGAGAACAGTAATGAGAGTGCCCTTGATTGCTGTCAATTCGGTCTGCATTGTGTTGTTGCTGCTGTTTGGCTGAAGCGAAGACTTGACTGAATCTGGATGTTGAACTAAGAGAAGACATTTTCAGGGCTCATGGGGATGTCTCCATGATTCCTGAAGGAGAAACCCTACATGCACAACAAagaagattacacacacacacacacacacacacacacgtgttggATCACAAAGAATCAGCATTACATTTGATTTCCTTTTTATTTATTCCCACTTTACATGGTCAGACTGAGTAACAGTTCAGATGCAGGAACAGTCAGTGTTTACTCCTTTACGCCATTCAGTTTCTTTCAAAGACACCGGTTAGTCAATGATGTTTACACAAAGCAGTCCAAAGCATGTTGCTGCTGGATGATTTCTACAATGTCAAAGGATAATTTACTTTGAGCATGCAATTTAATGAAACTTTCTTTCTCCTAATATGAAACTGTGATTGCGTCACAGTGCTGATTATGGCATGCATGTTGCTGTTAACATATTGTAATCTTATGTTGCAAAAAGTGTATTTTTCTTCACaccttcctggacaaaatgttaaATGTACATAATTTGAACAGACATAAACGCCATAAATCGGGATATATATTTTGTGTCTCATGTAGAC
>TU549458
ATAAGGAAATACTTGAAGCTGTTAACGTCAGCTAACACGTTACAGATATGGCGTTTACATTATATTCCCTTATTCAAGCGGTGATTTTGTGTGTAAATGCTGTCGCCGTATTGCACGAAGAAAGATTTTTAAGTAAAATTGGCTGGGGTGTGGACCAAAGTATTGGGGGATTTGGTGATGAACCGGGCATTAAAGTGCAGCTAATGAACCTTGTCCGCTCTGTGAGAACAGTAATGAGAGTGCCCTTGATTGCTGTCAATTCGGTCTGCATTGTGTTGTTGCTGCTGTTTGGCTGAAGCGAAGACTTGACTGAATCTGGATGTTGAACTAAGAGAAGACATTTTCAGGGCTCATGGGGATGTCTCCATGATTCCTGAAGGAGAAACCCTACATGCACAACAAagaagattacacacacacacacacacacacacacacgtgttggATCACAAAGAATCAGCATTACATTTGATTTCCTTTTTATTTATTCCCACTTTACATGGTCAGACTGAGTAACAGTTCAGATGCAGGAACAGTCAGTGTTTACTCCTTTACGCCATTCAGTTTCTTTCAAAGACACCGGTTAGTCAATGATGTTTACACAAAGCAGTCCAAAGCATGTTGCTGCTGGATGATTTCTACAATGTCAAAGGATAATTTACTTTGAGCATGCAATTTAATGAAACTTTCTTTCTCCTAATATGAAACTGTGATTGCGTCACAGTGCTGATTATGGCATGCATGTTGCTGTTAACATATTGTAATCTTATGTTGCAAAAAGTGTATTTTTCTTCACaccttcctggacaaaatgttaaATGTACATAATTTGAACAGACATAAACGCCATAAATCGGGATATATATTTTGTGTCTCATGTAGACAACTTAATTATGTATGACTTTTTTTCTCAGTATCTTTCAATCAATTACTTGAAAAAAATAAAGATGTTTTAA

Function

NR:

description
YEE9 protein precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001160515.1 False 908 mRNA 0.39 3 20477833 20479158
TU549458 True 956 lncRNA 0.38 3 20477857 20479230

Neighbor

gene id symbol gene type direction distance location
LOC101268919 LOC106585370 coding upstream 434 20464319 ~ 20477399 (+)
rchy1 LOC106585368 coding upstream 32009 20440861 ~ 20445824 (+)
LOC110525418 LOC106585365 coding upstream 413686 20039566 ~ 20064147 (+)
LOC110525417 LOC106585364 coding upstream 466101 19945869 ~ 20011732 (+)
LOC110525113 LOC101448038 coding upstream 533785 19919653 ~ 19944048 (+)
si:ch211-12e13.1 LOC106585371 coding downstream 179 20479337 ~ 20485695 (+)
susd1 LOC106585372 coding downstream 8767 20487925 ~ 20499166 (+)
LOC110525424 LOC106585373 coding downstream 47928 20527086 ~ 20528985 (+)
LOC110525429 NA coding downstream 54121 20533279 ~ 20537508 (+)
poli poli coding downstream 65832 20544990 ~ 20554349 (+)
G483526 LOC106585369 non-coding upstream 16376 20460714 ~ 20461457 (+)
G483521 NA non-coding upstream 25535 20451790 ~ 20452298 (+)
G483445 NA non-coding upstream 136416 20341181 ~ 20341417 (+)
G483437 NA non-coding upstream 147961 20329557 ~ 20329872 (+)
G483435 NA non-coding upstream 150077 20327552 ~ 20327756 (+)
G483556 LOC106585377 non-coding downstream 52918 20532076 ~ 20570363 (+)
G483593 NA non-coding downstream 140942 20620100 ~ 20706405 (+)
G483596 NA non-coding downstream 156217 20635375 ~ 20636575 (+)
G483631 NA non-coding downstream 211690 20690848 ~ 20692359 (+)
G482551 LOC106585704 other upstream 1218225 19259149 ~ 19259608 (+)
G482000 NA other upstream 1619677 18857627 ~ 18858156 (+)
G481159 NA other upstream 2137267 18335332 ~ 18340566 (+)
G481205 NA other upstream 2187366 18290233 ~ 18290467 (+)
G481201 NA other upstream 2192521 18284797 ~ 18285312 (+)
LOC110525431 LOC106585378 other downstream 121660 20591803 ~ 20603188 (+)
G483669 LOC106585393 other downstream 323618 20802776 ~ 20803806 (+)
LOC110525116 adamtsl2 other downstream 479597 20958755 ~ 20984618 (+)
G484674 NA other downstream 984981 21464139 ~ 21466905 (+)

Expression


Co-expression Network