LOC110525429


Basic Information

Item Value
gene id LOC110525429
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 20533279 ~ 20537508 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036980144.1
ATGGACCAGATCAGTGCAGGGTGCATAGACTGTGGAAACATATTAGTTTGGCACACTGAAGGCAGTCACTGGATCAACCTCAAGCCTGTATTGGAACTAATAGACAGAGGCCACAATGTTACAGTGCTGGTAAACAGTGCTTCTCTGTACATAGACCCCACGGAATGCTCTCGCTTCAGCTACCAACCCTTCAATGGCTCAGTCTCTGTGGAGGATTGCCTTGAGGAGTTCATACATTTTTCCATGTACGAGATGGACCACCTGTACTACTGGCAGATCCACTGGAGACTTGATGAACTCATACAAAGACAAATTCAGCAAAACATGCAGATTGTGGATGGACTGTTAAAGTCAGAGAGCGTcatggagagactgagagaggccAAGTATGAACTTCTATTAGCTGATTCCATTTGGCCTGGCAGTAAGCTGGTGGTAGAGATGCTGGGACTTCCTCTGGTTACACGTTTCTCTATCGCCCACACCAGGGAGAGGCTCTGTGGGCAGCTTCCGGTACCATTCTACGTCCCTAGTGCCATGGTAAAATGAACGGACAAAATTAATTTTGCTGAGACTGAGGAATTTCCTGTTCTATACGTCTTTTGGCGTGATATAGATGACTACTACAGTGATGCTATAGGTGAGCCAACAACAACTTGTGCGATGATAGGAAACGCTGATCTCTGGCTGGTCCGTACATACTGGGACTTTGAGTACCCCCGACCTTTCCTCCCAAACTTCAAATTTGTTGGAGGAATCCACTGCAAGACCGCCAAGCTCTTACCAGAGGCCCTGGAGGAGTTTGTGCAGAGCTCTGGAGATCACGCCATTGTTGTGTTCACTCTGGGGTCCATGATCAGGAACATGACCACAGAGCAGGCGGATATGATCACCTCAGCCCTGGGACAGATACCACAGAAGATTCTGTGGAGGCACAGTGAGGAGAAGCCTGAGACTCTGGCTCCCAACACCAGAGTGTACAACTGGATCCCACAGAACGACCTGCTGGGTAGCTATAGGTTTTTTATAACAAAGACAATAATTCATTATTATGCCTGTTTGGTATAGTGCATAAACTAATCTAAAACTAGAGCATTGATCACCCATGGTGGAACCAATGGAATCTATGAGGATATTTACAATGGGGTTCCCATGGTGGGTATTCCTATGTTTGCTGACCAGCCAGACAATATGATCCATATGAAGGCCAAGGGAGTTGCTGTCATCATGGACTTCAACTCCATGCAAACCTGGGACCTTGTGGATGGACTCAATGATGTGATCAATAACCCATCGTATAGGGAGAACGCCATGAGGCTGTCCAGAATCCATTATCACAGACCGCTCAGTCCTAAGGATGAGGCATTGTTCTGGCTGGAGTTCACTATGAGAAACAGAGTCCAGGCCCAACAGCTCACCTGGTACCAGTACCACAGCCTGGATGTGCTGGCTCTGCTTCTGGCTGTCCTGCTGCTCCTAACCCTCCTCTTCATCAAAACAGGCTTCTTCTGCATCAGGAGTTGCTGTTATGGAACCAAGTTTAAAAGCAAGGCAGAGTGACAGCTTCAGCCATATAAATACAATGGACATCTCTATTCACGTCAAttatggcataatgggtggactggaaGCCTTTGAGTGTGCACGTAAGAGCAGGAAATAAAAGCAGTAAGTAAAAACATCAACATGTGTTGTGATTTGTTAaatcaactcaactgacattacaaaaaaatacattccattgcatgagccacatcagttagccTCATTTGAATTAACATTCTATATTACCATGGAAATGATTGCATCGTAATACCAGGCAGCAATGGAGTGTATCAATGAGTTTAatcagtcaaattgccagggttagaggtccCTTGCCCGTTCTATTCATTCAATTTATGGGTTCAGCACCAGGCAATATTATTTCAATACTGTTACTTGACTTTCTTCCTCATCAGGGAGAAGTGATAGCCACCAAACAGAATGTTTTGTCTCATATTGTACGTTCCATTTATTTTAGTTAACGTTTGCATTCATTGCCTGGTTGTAGAGGAAATTACAGGCTTTACACAAGTTGGACCTGTTCTTTCAAAATA
>TU549525
AGGCTGGCAGGCAGAGCATACCGGCTTAAATAATCATACAGTTATATATCATAGGGTGCATAGACTGTGGAAACATATTAGTTTGGCACACTGAAGGCAGTCACTGGATCAACCTCAAGCCTGTATTGGAGACTAATAGACAGAGGCCACAATGTTACAGTGCTGGTAAACAGTGCTTCTCTGTACATAGACCCCACGGAATGCTCTCGCTTCAGCTACCAACCCTTCAATGGCTCAGTCTCTGTGGAGGATTGCCTTGAGGAGTTCATACATTTTTCCATGTACGAGATGGACCACCTGTACTACTGGCAGATCCACTGGAGACTTGATGAACTCATACAAAGACAAATTCAGCAAAACATGCAGATTGTGGATGGACTGTTAAAGTCAGAGAGCGTcatggagagactgagagaggccAAGTATGAACTTCTATTAGCTGATTCCATTTGGCCTGGCAGTAAGCTGGTGGTAGAGATGCTGGGACTTCCTCTGGTGTACACGTTTCTCTATCGCCCACACCAGGGAGAGGCTCTGTGGGCAGCTTCCGGCCTACCATTCTACGTCCCTAGTGCCATGGTAAAATGAACGGACAAAATTAATTTTGCTGAGACTGAGGAATTTCCTGTTCTATACGTCTTTTGGCGTGATATAGATGACTACTACAGTGATGCTATAGCCAACAACAACTTGTGCGATGATAGGAAACGCTGATCTCTGGCTGGTCCGTACATACTGGGACTTTGAGTACCCCCGACCTTTCCTCCCAAACTTCAAATTTGTTGGAGGAATCCACTGCAAGACCGCCAAGCTCTTACCAGAGATTCTGTGGAGGCACAGTGAGGAGAAGCCTGAGACTCTGGCTCCCAACACCAGAGTGTACAACTGGATCCCACAGAACGACCTGCTGGCCAGACAATATGATCCATATGAAGGCCAAGGGAGTTGCTGTCATCATGGACTTCAACTCCATGCAAACCTGGGACCTTGTGGATGGACTCAATGATGTGATCAATAACCCATCGTATAGGGAGAACGCCATGAGGCTGTCCAGAATCCATTATCACAGACCGCTCAGTCCTAAGGATGAGGCATTGTTCTGGCTGGAGTTCACTATGAGAAACAGAGGTTCCAGGCCCAACAGCTCACCTGGTACCAGTACCACAGCCTGGATGTGCTGGCTCTGCTTCTGGCTGTCCTGCTGCTCCTAACCCTCCTCTTCATCAAAACAGGCTTCTTCTGCATCAGGAGTTGCTGTTATGGAACCAAGTTTAAAAGCAAGGCAGAGTGACAGCTTCAGCCATATAAATACAATGGACATCTCTATTCACGTCAAttatggcataatgggtggactggaaGCCTTTGAGTGTGCACGTAAGAGCAGGAAATAAAAGCAGTAAGTAAAAACATCAACATG

Function

NR:

description
UDP-glucuronosyltransferase 2C1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036980144.1 False 2099 mRNA 0.45 10 20533279 20537508
TU549525 True 1420 TUCP 0.47 5 20534509 20537098

Neighbor

gene id symbol gene type direction distance location
LOC110525424 LOC106585373 coding upstream 4294 20527086 ~ 20528985 (+)
susd1 LOC106585372 coding upstream 34113 20487925 ~ 20499166 (+)
si:ch211-12e13.1 LOC106585371 coding upstream 47584 20479337 ~ 20485695 (+)
yee9 yee9 coding upstream 54121 20477833 ~ 20479230 (+)
LOC101268919 LOC106585370 coding upstream 55880 20464319 ~ 20477399 (+)
poli poli coding downstream 7482 20544990 ~ 20554349 (+)
LOC110525428 LOC105014697 coding downstream 17226 20554734 ~ 20564083 (+)
LOC110525431 LOC106585378 coding downstream 54295 20591803 ~ 20603188 (+)
scarb2a LOC106585381 coding downstream 87092 20624600 ~ 20645108 (+)
gsdf LOC106585325 coding downstream 141637 20679145 ~ 20682349 (+)
G483526 LOC106585369 non-coding upstream 71822 20460714 ~ 20461457 (+)
G483521 NA non-coding upstream 80981 20451790 ~ 20452298 (+)
G483445 NA non-coding upstream 191862 20341181 ~ 20341417 (+)
G483593 NA non-coding downstream 82592 20620100 ~ 20706405 (+)
G483596 NA non-coding downstream 97867 20635375 ~ 20636575 (+)
G483631 NA non-coding downstream 153340 20690848 ~ 20692359 (+)
G483690 LOC106585396 non-coding downstream 349399 20886907 ~ 20889734 (+)
G483721 LOC106585399 non-coding downstream 385658 20923166 ~ 20926045 (+)
G482551 LOC106585704 other upstream 1273671 19259149 ~ 19259608 (+)
G482000 NA other upstream 1675123 18857627 ~ 18858156 (+)
G481159 NA other upstream 2192713 18335332 ~ 18340566 (+)
G481205 NA other upstream 2242812 18290233 ~ 18290467 (+)
G481201 NA other upstream 2247967 18284797 ~ 18285312 (+)
G483669 LOC106585393 other downstream 265268 20802776 ~ 20803806 (+)
LOC110525116 adamtsl2 other downstream 421247 20958755 ~ 20984618 (+)
G484674 NA other downstream 926631 21464139 ~ 21466905 (+)
G484726 NA other downstream 1016224 21553732 ~ 21554097 (+)

Expression


Co-expression Network