LOC110525121


Basic Information

Item Value
gene id LOC110525121
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 22508047 ~ 22511597 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110525121
ATGGCTTGGTACTGTGTAACAGTAGCTCCACCTCAGCACCTGCTGGGACCCCAGGAGCTCTGGAACAACGGAGGGGTGTCCTACGTTTTCTTATTATTTTCACTTAAATCTATACATTTATACAATATCAGAAGCTGTTGCAGTGCTGCGGATATCTTCCCAAAGTGCTGGACTCTGATGACTATTGCCATCCGTATCGTGGACAGAGCCCTTGGAGATGTCTTTGGTTTCCGGCACTGAGAGGGGTGCATTGCTGGGTGTGTGACAAGGCCACCCGGAAGCTTTCTGTGCTCCGCTCCGCTGTGTCTGAGTACCTGAGTCTGGTCAAGGATGAAGACGAGACGGTGAGGAAAGTAGTACTGTCAGACTCAATTCATCCATTCATCAAAGAATCCCTGGTGGTGGTGGAGCACCACTTTCCCCAGTACTTTCTAGTGGGACAGGACATACTGGGCAACAAAGAGGTTGCAGACAAAGTGCTGTCCCTCGTGCCCAAAGATGTCAGAAAGGAGCTTCTGCAGTGCTTCCAGACTGAGAAAAACCCTGAGAAGCGCTGGGGAAGACTTAAGACTCTGGTCCAAAACAAACGTACAACTGCCAAGGGCCACTACTTTGAGAAGGAGGTAATGTGCAGTACTTTTACCCTCGGCTCGATGTAACCATTTGCTGAAGAGCCCCATTCAGCATCCATCCCAAAACCAGGGGGATTTCTGTTCCTATTGACCTGAGAAAACTGGATCGCTTTGACCCCTTCTATGTGCCCGCTATCAGTCTGATCTGTGAGTTGGATCGGCCCAAGACagcagagggggaagaggaggaggaaaccaaggagaatgagagagaagcagGAGAGCGACGGAAGATAAGAGACTACAAACGAACAAGTTTGGCGAAGTATGTAAAAACTATTTGATCGATTCCTGTAAGGGATGGTTCTCTCAAGGAAAGGGGGCATCTTAAAAAGAGTGATCTTCAAAAGGACTTCTAACCCTGAGCAGTGTCCAACGGAACACTGTCTGTTGCTGGGTTTGGTACCTACAATGGTTGGCTAATCTTCACAAGCCCATCATATCAGTTGTTCATAATCTGACCATTAAAGATGGAGAACACACATTACAGATACACTGTAAACAGATGGTCTCAGTTTGAGAATTGTCTTGCAAATATTTTACTCTTTCTCAATGATTGAAAATCACAGTTGTGCAAAACTTTTATAAAGCCTATTGCTGAAAATGACTTTgcactacaaaaaaaaaaaaaaaaaaaa

Function

NR:

description
DNA primase small subunit

GO:

id name namespace
GO:0016740 transferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110525121 True 1270 mRNA 0.46 2 22508047 22511597

Neighbor

gene id symbol gene type direction distance location
LOC110525496 LOC106585447 coding upstream 288 22466485 ~ 22507759 (+)
LOC110525489 olm2a coding upstream 112975 22380276 ~ 22395072 (+)
adgrd2 LOC106585442 coding upstream 293343 22195423 ~ 22214704 (+)
LOC110525487 LOC106585441 coding upstream 402943 22097493 ~ 22105104 (+)
LOC110525486 LOC106585440 coding upstream 557847 21929133 ~ 21950200 (+)
LOC110525015 LOC106585332 coding downstream 15170 22526767 ~ 22528403 (+)
LOC110525499 LOC106585451 coding downstream 105522 22617119 ~ 22625917 (+)
LOC110525502 zdh12 coding downstream 114447 22626044 ~ 22628024 (+)
LOC110525504 LOC106585454 coding downstream 129300 22640897 ~ 22644893 (+)
LOC110525503 LOC106585452 coding downstream 134731 22646328 ~ 22656383 (+)
G485806 rpl35 non-coding upstream 67007 22438886 ~ 22441040 (+)
G485799 NA non-coding upstream 81601 22424710 ~ 22426446 (+)
G485779 NA non-coding upstream 110033 22397669 ~ 22398014 (+)
G485763 NA non-coding upstream 148364 22359377 ~ 22359683 (+)
G485728 NA non-coding upstream 153601 22353936 ~ 22354446 (+)
G485862 NA non-coding downstream 8990 22520587 ~ 22520862 (+)
G486069 NA non-coding downstream 78161 22589758 ~ 22589961 (+)
G486125 NA non-coding downstream 160154 22671751 ~ 22672087 (+)
G486129 NA non-coding downstream 167215 22678812 ~ 22679031 (+)
G485780 NA other upstream 63428 22441316 ~ 22444619 (+)
G484726 NA other upstream 953950 21553732 ~ 21554097 (+)
G484674 NA other upstream 1041142 21464139 ~ 21466905 (+)
LOC110525116 adamtsl2 other upstream 1544721 20958755 ~ 20984618 (+)
G483669 LOC106585393 other upstream 1704241 20802776 ~ 20803806 (+)
G486127 NA other downstream 162645 22674242 ~ 22674452 (+)
LOC110525518 LOC106585474 other downstream 679035 23079630 ~ 23197514 (+)
G487078 LOC106585486 other downstream 1017143 23528740 ~ 23531799 (+)
G487146 LOC106585492 other downstream 1141523 23653120 ~ 23667927 (+)
LOC110525563 LOC106585507 other downstream 1400224 23911741 ~ 23914297 (+)

Expression


Co-expression Network