LOC110525015 (LOC106585332)


Basic Information

Item Value
gene id LOC110525015
gene name LOC106585332
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 22526767 ~ 22528403 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604976.2
CAGTTACGCGAGAAATATCTTCTCTCAGCCGGGGGAGGATCCCCCAGACCTCCCTACTGGTTTGGGGCTAAACTCCGAATGTTTTCAAATCCTAGAAACGCCCCTGGGTGCAACGTGGGCGACAACATTGATATAAATCGGACTTGAATGTCAAAATCCATTGAGTACTCCCTACATGCTGATCATGACAGCTGCTTTCGCTGAGGCAGTTTGCTGTGAGATCCCTGCGGAGAGTGACAGGAGTCGTTATGCCCGAGTGAACCGCAGAGACAAAGGGCGGCCAATGTGCCTCACTCGGTTCGCTGCGCTTGTCTCTTTACTTCTGTCTTGTTTGGTACTCTTGCTAAACGTATATCATCATAAAGCAGCAGACTACCAGCACACTTCAGCTGGAGGTGATTCTATGGGTGGCGTTCAACAGCAGCAGCAAATTGAAAACAATCTAAGTGCCCATCTGACAGctccATACTCATTTAATCATTCAAAAGTGATATACCTTGAATGGGAGTACAACCTTGGACTTGCTCACCTTAGCGGCTTTAAGTATCATGACTGCGACCTCATCGTGCTCAATGATGGCATGTACATGGTTTACCTGCAGATCACGTTCCGAAGCCCTGGTCACTTTGTGTGTAACGAGGAGGAATCAGGTTTCATCCTCACCCAAAAAGTAATCCTGTTTGCAAAGGGCTACCAAAAAAACAGAGACCTGCTAACAGCATCTGACACAGTGGACTGCATTCCCAAATCGAATGACTGTCAGCCAACTGGTTCAGAGGGCTGCAAGGAGGAGTCAGGGACTCAGTACTGGGAAAAGTCTCTCTGCACGTCCGGGGTGTTTAAACTAAAAGCTGGGGACAGGCTCAGAGTGAGGAAGGGGGACAGGTACCATGAGCTGATGCTGCTTCAAGAAGACAGGACATTTTTTGGGGCACATCTCATTTGATGTTGTTCCCCAGAAACAACAGGTGCAGGGATAATAAtggacttatatatatatatatatatatagcagtata

Function

NR:

description
tumor necrosis factor ligand superfamily member 15-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604976.2 True 1019 mRNA 0.47 4 22526767 22528403

Neighbor

gene id symbol gene type direction distance location
LOC110525121 NA coding upstream 15170 22508047 ~ 22511597 (+)
LOC110525496 LOC106585447 coding upstream 19008 22466485 ~ 22507759 (+)
LOC110525489 olm2a coding upstream 131695 22380276 ~ 22395072 (+)
adgrd2 LOC106585442 coding upstream 312063 22195423 ~ 22214704 (+)
LOC110525487 LOC106585441 coding upstream 421663 22097493 ~ 22105104 (+)
LOC110525499 LOC106585451 coding downstream 88716 22617119 ~ 22625917 (+)
LOC110525502 zdh12 coding downstream 97641 22626044 ~ 22628024 (+)
LOC110525504 LOC106585454 coding downstream 112494 22640897 ~ 22644893 (+)
LOC110525503 LOC106585452 coding downstream 117925 22646328 ~ 22656383 (+)
LOC110525507 LOC106585456 coding downstream 164397 22692800 ~ 22721327 (+)
G485862 NA non-coding upstream 5905 22520587 ~ 22520862 (+)
G485806 rpl35 non-coding upstream 85727 22438886 ~ 22441040 (+)
G485799 NA non-coding upstream 100321 22424710 ~ 22426446 (+)
G485779 NA non-coding upstream 128753 22397669 ~ 22398014 (+)
G485763 NA non-coding upstream 167084 22359377 ~ 22359683 (+)
G486069 NA non-coding downstream 61355 22589758 ~ 22589961 (+)
G486125 NA non-coding downstream 143348 22671751 ~ 22672087 (+)
G486129 NA non-coding downstream 150409 22678812 ~ 22679031 (+)
G486111 NA non-coding downstream 202587 22730990 ~ 22732203 (+)
G485780 NA other upstream 82148 22441316 ~ 22444619 (+)
G484726 NA other upstream 972670 21553732 ~ 21554097 (+)
G484674 NA other upstream 1059862 21464139 ~ 21466905 (+)
LOC110525116 adamtsl2 other upstream 1563441 20958755 ~ 20984618 (+)
G483669 LOC106585393 other upstream 1722961 20802776 ~ 20803806 (+)
G486127 NA other downstream 145839 22674242 ~ 22674452 (+)
LOC110525518 LOC106585474 other downstream 662229 23079630 ~ 23197514 (+)
G487078 LOC106585486 other downstream 1000337 23528740 ~ 23531799 (+)
G487146 LOC106585492 other downstream 1124717 23653120 ~ 23667927 (+)
LOC110525563 LOC106585507 other downstream 1383418 23911741 ~ 23914297 (+)

Expression


Co-expression Network