gstt1a (LOC106585460)


Basic Information

Item Value
gene id gstt1a
gene name LOC106585460
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 22754269 ~ 22757520 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605686.2
CAAGTACAAGTAGACAATGGACCTGATCGGACAACTCAGAGCCTCTGCTCTTTTCTGTCCATATTGAACTGTCGGAACCCTTTATAATCATTTGACTATATGGGAGGGGCTCCATACCAACATAAAGGATAGCGGGTGCTGGGAAGAGATTCGGCACATAACATCCCTTCTACATCTGTGAAAATGCCGTTGGAATTGTATCTTGATCTGCACTCTCAGCCATGTCGCTCTGTGTTCATTTTTGCAAAGAAAACAAACATTCCGTTTGATTTCAAGTTTGTCGATCTGGCTACAGGCCAGCAGTATGGGGAAGACTTTGGTAAGATCAGTGTGGTGAGAAAGGTTCCGGTCATGAGAGATGGAGACTTCATTCTTACAGAGAGTGTTGCCATCCTAAAGTACCTGGCTGAAAAATTTGGCACCTCAGATTCAGACCACTGGTACCCAGCAGACCTGCAAAAGCGAGCCCGGGTCAACGAGTACCTGTCTTGGCAACACGCAGCCATGCGAGCCCATGGCTCAAAGGTGTTCTGGTTCAGGGCAATAGTTCCCATCATAACTGGTTCAGACGTCCCTAAGGAGAAAATGGACTCTGCTATGGAGGACCTGACACTGTCTCTGAAGGTGTTTGAGGAGAAGTTCCTGGATGACAGACCCTTCATCATTGGGGAAAAGATCTCACTAGCAGACCTGGTGGCAATAGTAGAGATCATGCAGCCGGTTGGCACTGGTCTGGATTTGTTTGAGAACAGGCCCACTCTCGGTGCCTGGAGAGACCGGGTAAAAATGGAGCTTGGCGAGGCTCTCTTTGACGAAGCTCACAAGACCATCATGGATGTGGCCAGCCTGCCTCAAACCTTTGAGAACAATGGAATGCTGGAATTTCTCAAGCCAAAGATACAGAAGATGTTCAACTAACTCATGATGAGAACATTTTGACCACCAAGTATTGTGTGACAATGCTTTTAATTTTTGTCTTAATTTTTTATGTCTTTGCACATTTTATTTGCAACCGGAACTCAAGtttagacgtaacatagtaaacgcaCATCCGATACTCcaattagtataatatgttataTTTCGTATTGTATGTATTAATTTTTGGAACTCCATCAACCATTTTGtgtaatatgttacaaattacaattcatatgatatgttaccgattgcaattcatacaatatgttacaaatttgcaaatcgtatgatatgttatgaattccaatttgttgtggctaacgttagctaggtggctaacgttaactaggctaggggttaaggttaagggaagggttagctaacatgctaagtagttgcaaagtagctaaaaagtagtaagttgtTGCTAATtatctaaaatgctaaagttgtctgtgatgagattcagaACAcaaaacctttgggttgctagacgttcccGTTATACGCCAATCCAGCCACCCTGACTAACCACCCTactttttgccttaagtaaccatctgtcttatgttaCCATACCAaatataacatatcatactaattttagAGTCCcttatttacatttactatgttacgtctagtctatgagaccaagCTGTTATTAGAATAAACACTTCATTTCTTGataataaataaaatcaaatctaaatgtg

Function

NR:

description
glutathione S-transferase theta-1-like

GO: NA

KEGG:

id description
K00799 GST, gst; glutathione S-transferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605686.2 True 1634 mRNA 0.41 5 22754269 22757520

Neighbor

gene id symbol gene type direction distance location
LOC110525510 LOC106585458 coding upstream 27106 22721634 ~ 22727163 (+)
LOC110525507 LOC106585456 coding upstream 32942 22692800 ~ 22721327 (+)
LOC110525503 LOC106585452 coding upstream 97886 22646328 ~ 22656383 (+)
LOC110525504 LOC106585454 coding upstream 109376 22640897 ~ 22644893 (+)
LOC110525502 zdh12 coding upstream 126245 22626044 ~ 22628024 (+)
LOC110525512 LOC106585461 coding downstream 1921 22759441 ~ 22766009 (+)
LOC110525516 LOC106585462 coding downstream 19406 22776022 ~ 22781759 (+)
LOC118964854 LOC106585477 coding downstream 53201 22810721 ~ 22814092 (+)
LOC118964852 LOC106585477 coding downstream 60804 22818324 ~ 22823007 (+)
LOC118964853 LOC106585477 coding downstream 69563 22827083 ~ 22831756 (+)
G486159 NA non-coding upstream 3145 22750913 ~ 22751124 (+)
G486154 NA non-coding upstream 7599 22746262 ~ 22746670 (+)
G486151 NA non-coding upstream 9252 22744652 ~ 22745017 (+)
G486150 NA non-coding upstream 9832 22743836 ~ 22744437 (+)
G486147 LOC106582599 non-coding upstream 14342 22739696 ~ 22739927 (+)
G486246 NA non-coding downstream 195133 22952653 ~ 22953950 (+)
G486313 LOC105902522 non-coding downstream 303469 23060989 ~ 23062352 (+)
G486312 LOC107567955 non-coding downstream 305216 23062736 ~ 23064014 (+)
LOC110525520 LOC106585478 non-coding downstream 423833 23181353 ~ 23227167 (+)
G486127 NA other upstream 79817 22674242 ~ 22674452 (+)
G485780 NA other upstream 309650 22441316 ~ 22444619 (+)
G484726 NA other upstream 1200172 21553732 ~ 21554097 (+)
G484674 NA other upstream 1287364 21464139 ~ 21466905 (+)
LOC110525116 adamtsl2 other upstream 1790943 20958755 ~ 20984618 (+)
LOC110525518 LOC106585474 other downstream 433112 23079630 ~ 23197514 (+)
G487078 LOC106585486 other downstream 771220 23528740 ~ 23531799 (+)
G487146 LOC106585492 other downstream 895600 23653120 ~ 23667927 (+)
LOC110525563 LOC106585507 other downstream 1154301 23911741 ~ 23914297 (+)
G488049 NA other downstream 1822441 24579961 ~ 24586313 (+)

Expression


Co-expression Network