aakb1 (aakb1)


Basic Information

Item Value
gene id aakb1
gene name aakb1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 23614867 ~ 23617686 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036979151.1
TctcatccctggattgagTGGTTGTTGCTGAGTCAGAATGGGAAACAACAGCAGCAGTGGTGAGCGGGCCAGTGCAGGTCAGGGTGAGAGGCCCTATCAGCGTGACGATGGACAAGGTGCCAAGGATGGAGCACGGCCCAAGATTATCATGGACAGCACAGATGATGCTGACCTGTTTAACACCAGAGAGGCTAAAAATGCTCCTCAGGAGATTCAGGAGTTTCTAGCCTGGCAGCGGGACCTTGAGAGTGACAGTAAATGTCCCAGTCAGGCCAAGCCCACTGTGTTCCGTTGGACAGGCGCTGGCAAAGAGATCTTTGTGTCTGGATCATTCAACAACTGGGCCACCAAGATTCCCCTCAACAAAAGCCAGAACAACTTTGCAGCGGTTGTGGACTTGCCTGAGGGAGAACACCAGTACAAATTCTGTGTAGATGGACAGTGGACCCTCGACCCGACAGGGGCTGTGTTGACGACCAAAACTGGCACGGTCAATAATGTCATTCAGGTGAAGAGGACTGACTTTGAGGTGTTTGATGCCCTCATGATTGATTCTCAGGAATGTGCAGACATGTCAGACCTCTCGAGTTCCCCTCCGGGACCCTACCAGCAGGACCCATACATAACCAAGACGAGCGACAAGCTCAAGAACCCCCCCATCCTGCCACCACACTTGCTGCAAGTCCTACTCAATAAGGACACTGGCGTGTCTTGTGACCCAGCCCTTCTTCCAGAGCCCAACCATGTGATGCTCAACCACCTCTATGCCCTCTCCATCAAGGATGGGGTGATGGTTCTTAGCGCAACTCACCGCTACAAAAAGAAGTATGTGACCACACTTCTGTACAAGCCGATCTAATCATGCCATCATGTGCGTCCTGCCTAGAAACGTTTCAAATCTATTCTTGTATAATTCTGTTTTTTATATCGATGATTAAACTTCTCTCTATCTCAGA
>XM_036979149.1
AGCAAGTTTGTGTTGGGGTGGTTGTTGCTGAGTCAGAATGGGAAACAACAGCAGCAGTGGTGAGCGGGCCAGTGCAGGTCAGGGTGAGAGGCCCTATCAGCGTGACGATGGACAAGGTGCCAAGGATGGAGCACGGCCCAAGATTATCATGGACAGCACAGATGATGCTGACCTGTTTAACACCAGAGAGGCTAAAAATGCTCCTCAGGAGATTCAGGAGTTTCTAGCCTGGCAGCGGGACCTTGAGAGTGACAGTAAATGTCCCAGTCAGGCCAAGCCCACTGTGTTCCGTTGGACAGGCGCTGGCAAAGAGATCTTTGTGTCTGGATCATTCAACAACTGGGCCACCAAGATTCCCCTCAACAAAAGCCAGAACAACTTTGCAGCGGTTGTGGACTTGCCTGAGGGAGAACACCAGTACAAATTCTGTGTAGATGGACAGTGGACCCTCGACCCGACAGGGGCTGTGTTGACGACCAAAACTGGCACGGTCAATAATGTCATTCAGGTGAAGAGGACTGACTTTGAGGTGTTTGATGCCCTCATGATTGATTCTCAGGAATGTGCAGACATGTCAGACCTCTCGAGTTCCCCTCCGGGACCCTACCAGCAGGACCCATACATAACCAAGACGAGCGACAAGCTCAAGAACCCCCCCATCCTGCCACCACACTTGCTGCAAGTCCTACTCAATAAGGACACTGGCGTGTCTTGTGACCCAGCCCTTCTTCCAGAGCCCAACCATGTGATGCTCAACCACCTCTATGCCCTCTCCATCAAGGATGGGGTGATGGTTCTTAGCGCAACTCACCGCTACAAAAAGAAGTATGTGACCACACTTCTGTACAAGCCGATCTAATCATGCCATCATGTGCGTCCTGCCTAGAAACGTTTCAAATCTATTCTTGTATAATTCTGTTTTTTATATCGATGATTAAACTTCTCTCTATCTCAGA
>XM_036979148.1
ACAGAAACGCAAACCtaatTGGTTGTTGCTGAGTCAGAATGGGAAACAACAGCAGCAGTGGTGAGCGGGCCAGTGCAGGTCAGGGTGAGAGGCCCTATCAGCGTGACGATGGACAAGGTGCCAAGGATGGAGCACGGCCCAAGATTATCATGGACAGCACAGATGATGCTGACCTGTTTAACACCAGAGAGGCTAAAAATGCTCCTCAGGAGATTCAGGAGTTTCTAGCCTGGCAGCGGGACCTTGAGAGTGACAGTAAATGTCCCAGTCAGGCCAAGCCCACTGTGTTCCGTTGGACAGGCGCTGGCAAAGAGATCTTTGTGTCTGGATCATTCAACAACTGGGCCACCAAGATTCCCCTCAACAAAAGCCAGAACAACTTTGCAGCGGTTGTGGACTTGCCTGAGGGAGAACACCAGTACAAATTCTGTGTAGATGGACAGTGGACCCTCGACCCGACAGGGGCTGTGTTGACGACCAAAACTGGCACGGTCAATAATGTCATTCAGGTGAAGAGGACTGACTTTGAGGTGTTTGATGCCCTCATGATTGATTCTCAGGAATGTGCAGACATGTCAGACCTCTCGAGTTCCCCTCCGGGACCCTACCAGCAGGACCCATACATAACCAAGACGAGCGACAAGCTCAAGAACCCCCCCATCCTGCCACCACACTTGCTGCAAGTCCTACTCAATAAGGACACTGGCGTGTCTTGTGACCCAGCCCTTCTTCCAGAGCCCAACCATGTGATGCTCAACCACCTCTATGCCCTCTCCATCAAGGATGGGGTGATGGTTCTTAGCGCAACTCACCGCTACAAAAAGAAGTATGTGACCACACTTCTGTACAAGCCGATCTAATCATGCCATCATGTGCGTCCTGCCTAGAAACGTTTCAAATCTATTCTTGTATAATTCTGTTTTTTATATCGATGATTAAACTTCTCTCTATCTCAGA
>XM_036979152.1
CCATAGGTGGTATATATATGGTTGTTGCTGAGTCAGAATGGGAAACAACAGCAGCAGTGGTGAGCGGGCCAGTGCAGGTCAGGGTGAGAGGCCCTATCAGCGTGACGATGGACAAGGTGCCAAGGATGGAGCACGGCCCAAGATTATCATGGACAGCACAGATGATGCTGACCTGTTTAACACCAGAGAGGCTAAAAATGCTCCTCAGGAGATTCAGGAGTTTCTAGCCTGGCAGCGGGACCTTGAGAGTGACAGTAAATGTCCCAGTCAGGCCAAGCCCACTGTGTTCCGTTGGACAGGCGCTGGCAAAGAGATCTTTGTGTCTGGATCATTCAACAACTGGGCCACCAAGATTCCCCTCAACAAAAGCCAGAACAACTTTGCAGCGGTTGTGGACTTGCCTGAGGGAGAACACCAGTACAAATTCTGTGTAGATGGACAGTGGACCCTCGACCCGACAGGGGCTGTGTTGACGACCAAAACTGGCACGGTCAATAATGTCATTCAGGTGAAGAGGACTGACTTTGAGGTGTTTGATGCCCTCATGATTGATTCTCAGGAATGTGCAGACATGTCAGACCTCTCGAGTTCCCCTCCGGGACCCTACCAGCAGGACCCATACATAACCAAGACGAGCGACAAGCTCAAGAACCCCCCCATCCTGCCACCACACTTGCTGCAAGTCCTACTCAATAAGGACACTGGCGTGTCTTGTGACCCAGCCCTTCTTCCAGAGCCCAACCATGTGATGCTCAACCACCTCTATGCCCTCTCCATCAAGGATGGGGTGATGGTTCTTAGCGCAACTCACCGCTACAAAAAGAAGTATGTGACCACACTTCTGTACAAGCCGATCTAATCATGCCATCATGTGCGTCCTGCCTAGAAACGTTTCAAATCTATTCTTGTATAATTCTGTTTTTTATATCGATGATTAAACTTCTCTCTATCTCAGA
>XM_036979147.1
TTTGGCATGGATCTTCCGGATGTGATGTGTTTTAAGTTTGAGTAGCGAGGCAGTTTTTGCCATAGGTGGTATATATAGTAGGTCATATGGTTTTTGCTGATGCACAGAAACGCAAACCtaatTGCAGTGGTTGTTGCTGAGTCAGAATGGGAAACAACAGCAGCAGTGGTGAGCGGGCCAGTGCAGGTCAGGGTGAGAGGCCCTATCAGCGTGACGATGGACAAGGTGCCAAGGATGGAGCACGGCCCAAGATTATCATGGACAGCACAGATGATGCTGACCTGTTTAACACCAGAGAGGCTAAAAATGCTCCTCAGGAGATTCAGGAGTTTCTAGCCTGGCAGCGGGACCTTGAGAGTGACAGTAAATGTCCCAGTCAGGCCAAGCCCACTGTGTTCCGTTGGACAGGCGCTGGCAAAGAGATCTTTGTGTCTGGATCATTCAACAACTGGGCCACCAAGATTCCCCTCAACAAAAGCCAGAACAACTTTGCAGCGGTTGTGGACTTGCCTGAGGGAGAACACCAGTACAAATTCTGTGTAGATGGACAGTGGACCCTCGACCCGACAGGGGCTGTGTTGACGACCAAAACTGGCACGGTCAATAATGTCATTCAGGTGAAGAGGACTGACTTTGAGGTGTTTGATGCCCTCATGATTGATTCTCAGGAATGTGCAGACATGTCAGACCTCTCGAGTTCCCCTCCGGGACCCTACCAGCAGGACCCATACATAACCAAGACGAGCGACAAGCTCAAGAACCCCCCCATCCTGCCACCACACTTGCTGCAAGTCCTACTCAATAAGGACACTGGCGTGTCTTGTGACCCAGCCCTTCTTCCAGAGCCCAACCATGTGATGCTCAACCACCTCTATGCCCTCTCCATCAAGGATGGGGTGATGGTTCTTAGCGCAACTCACCGCTACAAAAAGAAGTATGTGACCACACTTCTGTACAAGCCGATCTAATCATGCCATCATGTGCGTCCTGCCTAGAAACGTTTCAAATCTATTCTTGTATAATTCTGTTTTTTATATCGATGATTAAACTTCTCTCTATCTCAGA
>XM_036979150.1
GCGAAAAAACAGGAAGAGTGGTTGTTGCTGAGTCAGAATGGGAAACAACAGCAGCAGTGGTGAGCGGGCCAGTGCAGGTCAGGGTGAGAGGCCCTATCAGCGTGACGATGGACAAGGTGCCAAGGATGGAGCACGGCCCAAGATTATCATGGACAGCACAGATGATGCTGACCTGTTTAACACCAGAGAGGCTAAAAATGCTCCTCAGGAGATTCAGGAGTTTCTAGCCTGGCAGCGGGACCTTGAGAGTGACAGTAAATGTCCCAGTCAGGCCAAGCCCACTGTGTTCCGTTGGACAGGCGCTGGCAAAGAGATCTTTGTGTCTGGATCATTCAACAACTGGGCCACCAAGATTCCCCTCAACAAAAGCCAGAACAACTTTGCAGCGGTTGTGGACTTGCCTGAGGGAGAACACCAGTACAAATTCTGTGTAGATGGACAGTGGACCCTCGACCCGACAGGGGCTGTGTTGACGACCAAAACTGGCACGGTCAATAATGTCATTCAGGTGAAGAGGACTGACTTTGAGGTGTTTGATGCCCTCATGATTGATTCTCAGGAATGTGCAGACATGTCAGACCTCTCGAGTTCCCCTCCGGGACCCTACCAGCAGGACCCATACATAACCAAGACGAGCGACAAGCTCAAGAACCCCCCCATCCTGCCACCACACTTGCTGCAAGTCCTACTCAATAAGGACACTGGCGTGTCTTGTGACCCAGCCCTTCTTCCAGAGCCCAACCATGTGATGCTCAACCACCTCTATGCCCTCTCCATCAAGGATGGGGTGATGGTTCTTAGCGCAACTCACCGCTACAAAAAGAAGTATGTGACCACACTTCTGTACAAGCCGATCTAATCATGCCATCATGTGCGTCCTGCCTAGAAACGTTTCAAATCTATTCTTGTATAATTCTGTTTTTTATATCGATGATTAAACTTCTCTCTATCTCAGA
>XM_021604960.2
GTGACTTCGAATGCGAAAAAACAGGAAGAGGTGTGTGCTCGTGCAGCCTACAGTCTGTCTTTGGGTTAGGTTACAATTTACCCGTTCAGGGGAAAATGGCGATAGGAAATACAATAGCGTAGATTCCCAGTATTATAATTTCCAGAAATTAAAGGAAGTGCAGTGGTTGTTGCTGAGTCAGAATGGGAAACAACAGCAGCAGTGGTGAGCGGGCCAGTGCAGGTCAGGGTGAGAGGCCCTATCAGCGTGACGATGGACAAGGTGCCAAGGATGGAGCACGGCCCAAGATTATCATGGACAGCACAGATGATGCTGACCTGTTTAACACCAGAGAGGCTAAAAATGCTCCTCAGGAGATTCAGGAGTTTCTAGCCTGGCAGCGGGACCTTGAGAGTGACAGTAAATGTCCCAGTCAGGCCAAGCCCACTGTGTTCCGTTGGACAGGCGCTGGCAAAGAGATCTTTGTGTCTGGATCATTCAACAACTGGGCCACCAAGATTCCCCTCAACAAAAGCCAGAACAACTTTGCAGCGGTTGTGGACTTGCCTGAGGGAGAACACCAGTACAAATTCTGTGTAGATGGACAGTGGACCCTCGACCCGACAGGGGCTGTGTTGACGACCAAAACTGGCACGGTCAATAATGTCATTCAGGTGAAGAGGACTGACTTTGAGGTGTTTGATGCCCTCATGATTGATTCTCAGGAATGTGCAGACATGTCAGACCTCTCGAGTTCCCCTCCGGGACCCTACCAGCAGGACCCATACATAACCAAGACGAGCGACAAGCTCAAGAACCCCCCCATCCTGCCACCACACTTGCTGCAAGTCCTACTCAATAAGGACACTGGCGTGTCTTGTGACCCAGCCCTTCTTCCAGAGCCCAACCATGTGATGCTCAACCACCTCTATGCCCTCTCCATCAAGGATGGGGTGATGGTTCTTAGCGCAACTCACCGCTACAAAAAGAAGTATGTGACCACACTTCTGTACAAGCCGATCTAATCATGCCATCATGTGCGTCCTGCCTAGAAACGTTTCAAATCTATTCTTGTATAATTCTGTTTTTTATATCGATGATTAAACTTCTCTCTATCTCAGA
>NM_001165146.2
AGTCTGTCTTTGGGTTAGGTTACAATTTACCCGTTCAGGGGAAAATGGCGATAGGAAATACAATAGCGTAGATTCCCAGTATTATAATTTCCAGAAATTAAAGGAAGTGGTTGTTGCTGAGTCAGAATGGGAAACAACAGCAGCAGTGGTGAGCGGGCCAGTGCAGGTCAGGGTGAGAGGCCCTATCAGCGTGACGATGGACAAGGTGCCAAGGATGGAGCACGGCCCAAGATTATCATGGACAGCACAGATGATGCTGACCTGTTTAACACCAGAGAGGCTAAAAATGCTCCTCAGGAGATTCAGGAGTTTCTAGCCTGGCAGCGGGACCTTGAGAGTGACAGTAAATGTCCCAGTCAGGCCAAGCCCACTGTGTTCCGTTGGACAGGCGCTGGCAAAGAGATCTTTGTGTCTGGATCATTCAACAACTGGGCCACCAAGATTCCCCTCAACAAAAGCCAGAACAACTTTGCAGCGGTTGTGGACTTGCCTGAGGGAGAACACCAGTACAAATTCTGTGTAGATGGACAGTGGACCCTCGACCCGACAGGGGCTGTGTTGACGACCAAAACTGGCACGGTCAATAATGTCATTCAGGTGAAGAGGACTGACTTTGAGGTGTTTGATGCCCTCATGATTGATTCTCAGGAATGTGCAGACATGTCAGACCTCTCGAGTTCCCCTCCGGGACCCTACCAGCAGGACCCATACATAACCAAGACGAGCGACAAGCTCAAGAACCCCCCCATCCTGCCACCACACTTGCTGCAAGTCCTACTCAATAAGGACACTGGCGTGTCTTGTGACCCAGCCCTTCTTCCAGAGCCCAACCATGTGATGCTCAACCACCTCTATGCCCTCTCCATCAAGGATGGGGTGATGGTTCTTAGCGCAACTCACCGCTACAAAAAGAAGTATGTGACCACACTTCTGTACAAGCCGATCTAATCATGCCATCATGTGCGTCCTGCCTAGAAACGTTTCAAATCTATTCTTGTATAATTCTGTTTTTTATATCGATGATTAAACTTCTCTCTATC

Function

NR:

description
5-AMP-activated protein kinase subunit beta-1 isoform X1

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0016301 kinase activity molecular_function

KEGG:

id description
K07199 PRKAB; 5'-AMP-activated protein kinase, regulatory beta subunit

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036979151.1 False 956 mRNA 0.50 8 23614867 23616981
XM_036979149.1 False 956 mRNA 0.50 8 23614867 23617331
XM_036979148.1 False 957 mRNA 0.50 8 23614867 23617385
XM_036979152.1 False 956 mRNA 0.50 8 23614867 23617429
XM_036979147.1 False 1065 mRNA 0.49 8 23614867 23617488
XM_036979150.1 False 956 mRNA 0.50 8 23614867 23617674
XM_021604960.2 False 1101 mRNA 0.49 8 23614867 23617686
NM_001165146.2 True 1040 mRNA 0.49 8 23614872 23617635

Neighbor

gene id symbol gene type direction distance location
pla2g1b LOC106585490 coding downstream 7041 23606349 ~ 23607826 (-)
LOC110525543 LOC106585487 coding downstream 24515 23588230 ~ 23590352 (-)
LOC110525180 hps4 coding downstream 26975 23582127 ~ 23587892 (-)
LOC110525541 rnf10 coding downstream 54065 23550291 ~ 23560802 (-)
si:ch73-138n13.1 LOC106585486 coding downstream 64714 23510610 ~ 23550153 (-)
LOC118965070 LOC106585337 coding upstream 5121 23622807 ~ 23643348 (-)
LOC110525548 LOC106585492 coding upstream 27309 23644995 ~ 23668368 (-)
LOC110525551 LOC106585494 coding upstream 88871 23706557 ~ 23710228 (-)
LOC110525552 LOC106585495 coding upstream 96265 23713875 ~ 23717830 (-)
LOC110525553 LOC106585496 coding upstream 100694 23718380 ~ 23728979 (-)
G487504 NA non-coding downstream 19884 23594705 ~ 23594983 (-)
G487503 NA non-coding downstream 20713 23593953 ~ 23594154 (-)
G487501 NA non-coding downstream 23810 23590664 ~ 23591057 (-)
G487495 NA non-coding downstream 40232 23574387 ~ 23574635 (-)
G487529 NA non-coding upstream 56243 23673929 ~ 23674146 (-)
G487538 hnf1a non-coding upstream 79532 23697218 ~ 23699515 (-)
G487546 NA non-coding upstream 85848 23703534 ~ 23704259 (-)
G487016 NA other downstream 222805 23390017 ~ 23392062 (-)
G487022 bicdl1 other downstream 228960 23385534 ~ 23385907 (-)
G486953 NA other downstream 361506 23251286 ~ 23258106 (-)
G486716 NA other downstream 774301 22837653 ~ 22840566 (-)
G488386 NA other upstream 735847 24353533 ~ 24353823 (-)
LOC110525585 LOC106585524 other upstream 1043211 24655788 ~ 24715090 (-)
G489038 NA other upstream 1488519 25106205 ~ 25106570 (-)
G489511 hmcn2 other upstream 1879277 25496963 ~ 25497489 (-)

Expression


Co-expression Network