LOC118965070 (LOC106585337)


Basic Information

Item Value
gene id LOC118965070
gene name LOC106585337
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 23622807 ~ 23643348 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036981822.1
tattgaatgaaaatTCCATGAGAAAATCTGttgccagcaagtgggagggtttttcAGCTGTTGAATTACATGTATTCAATGCGTGCAAGGGAACCACGCCTGCAAAGCCCATTGAGCACCTGCacaagTGCCCCTCCTTTCTCAGAAGAAGGATAGTATTCACCCCTGAAAGTAATTAGGTCATCTCTCATCTCTGGCTGGAGCCCCTAGTCTGCTTCAGTCTTCTCACACCTAAGACAGTCTTAAGACACTCGTCCCCAGCCGGTCCAATGTCTCCAGGGACGCCCCAGCCAACAGAGGTGAAGACCAAGCAGCTGCTGGATGTGAGTGCTGACCACTTGGGGGGCAGGGAGGCCCAGGAGATCCCCCCTCTGAAGAACTATGTCTACCTGACCATCCTCACTTGCTTCTGCCCAGCCTGGCCTGTTAACATCGTGGCTCTGGTCTTCTCTGTACTGTCTCAGAACAGTTATGATGAGGAGGACTATGAGGGTTCCGAGAGGCTCGGTAGGAAAGCCTTTCACATGGCGATAGCCTCCATGATCATTGGCCTCCTGATCTTCCTGATCTTATCCATAGTGCACTTTACAACGCATGCTGTATGAATGCTGGAGGATGAAAGATGGCAA

Function

NR:

description
PREDICTED: transmembrane protein 233-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036981822.1 True 629 mRNA 0.51 5 23622807 23643348

Neighbor

gene id symbol gene type direction distance location
aakb1 aakb1 coding downstream 5121 23614867 ~ 23617686 (-)
pla2g1b LOC106585490 coding downstream 14981 23606349 ~ 23607826 (-)
LOC110525543 LOC106585487 coding downstream 32455 23588230 ~ 23590352 (-)
LOC110525180 hps4 coding downstream 34915 23582127 ~ 23587892 (-)
LOC110525541 rnf10 coding downstream 62005 23550291 ~ 23560802 (-)
LOC110525548 LOC106585492 coding upstream 1647 23644995 ~ 23668368 (-)
LOC110525551 LOC106585494 coding upstream 63209 23706557 ~ 23710228 (-)
LOC110525552 LOC106585495 coding upstream 70603 23713875 ~ 23717830 (-)
LOC110525553 LOC106585496 coding upstream 75032 23718380 ~ 23728979 (-)
LOC110525554 LOC106585497 coding upstream 86652 23730000 ~ 23750838 (-)
G487504 NA non-coding downstream 27824 23594705 ~ 23594983 (-)
G487503 NA non-coding downstream 28653 23593953 ~ 23594154 (-)
G487501 NA non-coding downstream 31750 23590664 ~ 23591057 (-)
G487495 NA non-coding downstream 48172 23574387 ~ 23574635 (-)
G487529 NA non-coding upstream 30581 23673929 ~ 23674146 (-)
G487538 hnf1a non-coding upstream 53870 23697218 ~ 23699515 (-)
G487546 NA non-coding upstream 60186 23703534 ~ 23704259 (-)
G487016 NA other downstream 230745 23390017 ~ 23392062 (-)
G487022 bicdl1 other downstream 236900 23385534 ~ 23385907 (-)
G486953 NA other downstream 369446 23251286 ~ 23258106 (-)
G486716 NA other downstream 782241 22837653 ~ 22840566 (-)
G488386 NA other upstream 710185 24353533 ~ 24353823 (-)
LOC110525585 LOC106585524 other upstream 1017549 24655788 ~ 24715090 (-)
G489038 NA other upstream 1462857 25106205 ~ 25106570 (-)
G489511 hmcn2 other upstream 1853615 25496963 ~ 25497489 (-)

Expression


Co-expression Network