Item | Value |
---|---|
gene id | LOC110525551 |
gene name | LOC106585494 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 23706557 ~ 23710228 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036979678.1 | False | 1968 | mRNA | 0.45 | 3 | 23706557 | 23710173 |
XR_002473770.2 | False | 2306 | mRNA | 0.45 | 4 | 23706557 | 23710179 |
XR_002473774.2 | False | 2089 | mRNA | 0.45 | 4 | 23706557 | 23710195 |
XR_002473773.2 | False | 2130 | mRNA | 0.45 | 5 | 23706557 | 23710205 |
XR_002473771.2 | False | 2171 | mRNA | 0.45 | 5 | 23706557 | 23710214 |
XR_002473772.2 | False | 2315 | mRNA | 0.45 | 4 | 23706557 | 23710214 |
XM_021605759.2 | False | 2205 | mRNA | 0.45 | 6 | 23706557 | 23710215 |
XR_005052043.1 | False | 2409 | mRNA | 0.45 | 5 | 23706557 | 23710228 |
TU554118 | True | 944 | lncRNA | 0.47 | 3 | 23708018 | 23710130 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110525548 | LOC106585492 | coding | downstream | 38189 | 23644995 ~ 23668368 (-) |
LOC118965070 | LOC106585337 | coding | downstream | 63209 | 23622807 ~ 23643348 (-) |
aakb1 | aakb1 | coding | downstream | 88871 | 23614867 ~ 23617686 (-) |
pla2g1b | LOC106585490 | coding | downstream | 98731 | 23606349 ~ 23607826 (-) |
LOC110525543 | LOC106585487 | coding | downstream | 116205 | 23588230 ~ 23590352 (-) |
LOC110525552 | LOC106585495 | coding | upstream | 3723 | 23713875 ~ 23717830 (-) |
LOC110525553 | LOC106585496 | coding | upstream | 8152 | 23718380 ~ 23728979 (-) |
LOC110525554 | LOC106585497 | coding | upstream | 19772 | 23730000 ~ 23750838 (-) |
LOC110525555 | LOC106585499 | coding | upstream | 47576 | 23757804 ~ 23779720 (-) |
LOC110525558 | LOC106585502 | coding | upstream | 104574 | 23814802 ~ 23832541 (-) |
G487546 | NA | non-coding | downstream | 2298 | 23703534 ~ 23704259 (-) |
G487538 | hnf1a | non-coding | downstream | 7042 | 23697218 ~ 23699515 (-) |
G487529 | NA | non-coding | downstream | 32411 | 23673929 ~ 23674146 (-) |
G487504 | NA | non-coding | downstream | 111574 | 23594705 ~ 23594983 (-) |
G487503 | NA | non-coding | downstream | 112403 | 23593953 ~ 23594154 (-) |
G487553 | NA | non-coding | upstream | 19080 | 23729308 ~ 23729536 (-) |
G487620 | NA | non-coding | upstream | 129534 | 23839762 ~ 23839997 (-) |
G487628 | NA | non-coding | upstream | 147634 | 23857862 ~ 23863007 (-) |
G487650 | NA | non-coding | upstream | 204138 | 23914366 ~ 23915707 (-) |
LOC110525180 | hps4 | other | downstream | 121003 | 23582127 ~ 23587892 (-) |
G487016 | NA | other | downstream | 314495 | 23390017 ~ 23392062 (-) |
G487022 | bicdl1 | other | downstream | 320650 | 23385534 ~ 23385907 (-) |
G486953 | NA | other | downstream | 453196 | 23251286 ~ 23258106 (-) |
G486716 | NA | other | downstream | 865991 | 22837653 ~ 22840566 (-) |
G488386 | NA | other | upstream | 643305 | 24353533 ~ 24353823 (-) |
LOC110525585 | LOC106585524 | other | upstream | 950669 | 24655788 ~ 24715090 (-) |
G489038 | NA | other | upstream | 1395977 | 25106205 ~ 25106570 (-) |
G489511 | hmcn2 | other | upstream | 1786735 | 25496963 ~ 25497489 (-) |