Item | Value |
---|---|
gene id | LOC110525555 |
gene name | LOC106585499 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 23757804 ~ 23779720 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
aspartate beta-hydroxylase domain-containing protein 2-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036979684.1 | False | 3742 | mRNA | 0.46 | 4 | 23757804 | 23772857 |
XM_036979685.1 | False | 3649 | mRNA | 0.46 | 4 | 23757804 | 23772897 |
XM_036979683.1 | False | 4049 | mRNA | 0.46 | 4 | 23757804 | 23779306 |
XM_021605768.2 | True | 4022 | mRNA | 0.46 | 4 | 23757804 | 23779720 |
23,748,000
23,752,000
23,756,000
23,760,000
23,764,000
23,768,000
23,772,000
23,776,000
23,780,000
23,784,000
23,788,000
23,792,000
NC_048570.1
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gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110525554 | LOC106585497 | coding | downstream | 6966 | 23730000 ~ 23750838 (-) |
LOC110525553 | LOC106585496 | coding | downstream | 28825 | 23718380 ~ 23728979 (-) |
LOC110525552 | LOC106585495 | coding | downstream | 39974 | 23713875 ~ 23717830 (-) |
LOC110525551 | LOC106585494 | coding | downstream | 47576 | 23706557 ~ 23710228 (-) |
LOC110525548 | LOC106585492 | coding | downstream | 89436 | 23644995 ~ 23668368 (-) |
LOC110525558 | LOC106585502 | coding | upstream | 35082 | 23814802 ~ 23832541 (-) |
LOC110525220 | anapc5 | coding | upstream | 70290 | 23850010 ~ 23855515 (-) |
LOC110525561 | LOC106585505 | coding | upstream | 108934 | 23888654 ~ 23911739 (-) |
LOC110525564 | NA | coding | upstream | 136076 | 23915796 ~ 23918064 (-) |
LOC110525565 | LOC106585509 | coding | upstream | 164166 | 23943886 ~ 23948503 (-) |
G487553 | NA | non-coding | downstream | 28268 | 23729308 ~ 23729536 (-) |
G487546 | NA | non-coding | downstream | 53545 | 23703534 ~ 23704259 (-) |
G487538 | hnf1a | non-coding | downstream | 58289 | 23697218 ~ 23699515 (-) |
G487620 | NA | non-coding | upstream | 60042 | 23839762 ~ 23839997 (-) |
G487628 | NA | non-coding | upstream | 78142 | 23857862 ~ 23863007 (-) |
G487650 | NA | non-coding | upstream | 134646 | 23914366 ~ 23915707 (-) |
G487655 | NA | non-coding | upstream | 148172 | 23927892 ~ 23928124 (-) |
G487656 | NA | non-coding | upstream | 149531 | 23929251 ~ 23929771 (-) |
LOC110525180 | hps4 | other | downstream | 172250 | 23582127 ~ 23587892 (-) |
G487016 | NA | other | downstream | 365742 | 23390017 ~ 23392062 (-) |
G487022 | bicdl1 | other | downstream | 371897 | 23385534 ~ 23385907 (-) |
G486953 | NA | other | downstream | 504443 | 23251286 ~ 23258106 (-) |
G488386 | NA | other | upstream | 573813 | 24353533 ~ 24353823 (-) |
LOC110525585 | LOC106585524 | other | upstream | 881177 | 24655788 ~ 24715090 (-) |
G489038 | NA | other | upstream | 1326485 | 25106205 ~ 25106570 (-) |
G489511 | hmcn2 | other | upstream | 1717243 | 25496963 ~ 25497489 (-) |
LOC110525606 | LOC106585545 | other | upstream | 2499987 | 26271759 ~ 26283169 (-) |