ggt5a (LOC106585500)


Basic Information

Item Value
gene id ggt5a
gene name LOC106585500
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 23791444 ~ 23801151 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605770.2
TATGACCCTACCTACATTGGACCAGAGCATTGCTGACATGGGTATGATTTAACAACCTACGAGTTTTATCCTAAACATCTTCTCCTGTGACTCCTATGAACAATGTCAAAGAGGAGGAGTTTGCCTGTCCATCTGCGTTCGGAGTAAGGACATGGTGACAAAAGTTTTGGACGCCGCCGCAATTATAAGAGTGGACTGAAAAAACAAGCAATGGCCAGGTCTAAAGCAAGAATATACACGTGTATAGCTTTAACGCTAGTGAGCGCGATTGGGATAATTATTTTATGCACTGCATTCGCCAAGCAAAATTGTACGGAAGGGGTCTTTAGAAGCGCAGCTGTAGCCGCAGACTCGGAAATATGCTCAAAGATTGGACGAGATATCCTGCAGAGAGGAGGATCGGCAGTAGATGGAGCCATTGCTGCATTACTGTGCACCTCTGTCATAAACCCGCAAAGTATGGGCATTGGCGGAGGGTCCATATTCACGGTGATGGACAGTAGCGGCAAGGTTAAAATCATCAATTCAAGAGAGACTGTCCCTCAGGAGTTTAACCCTGATCTACTGAGTGGATGCCCACACACCTTCCAAATGATGACAGGCAGCCAATGGATTGGTGTCCCTGGAGAGATCCGTGGGTATGAGCAGGCCCACAGGTTGTTTGGGAAACTCCCATGGGCCAGCCTCTTCCATCCCACCATCAAGCTGGCCAGAGAGGGTTTCCCTGTACCCCAGGTCCTGGGCCGCTTTATCCCACTGATCAACACGGATGAGACCCTACCAGTACGTCAGTTGTTTCTAGATAAGAATGGAAACCTGCTGAAGGTTGGAGACACTGTGAAGTTTGAAAAATTGGCTGACACATTGGAGATCATTGCAAACCAAGGGGCAGATGCTTTTTACACTGGAAAAGTAGCAGAGGATTTAATCCGCGACATAAAAGAAGCAGGTGGAACACTATCCATGAAGGACCtggaattgtttaaagtgactgtGACAGATGCATGGACCATTCCTCTAGGAGAGTACCAGATGCACTTCCCCCCACCCCCATCAGGAGGCGCTATCCTCAGCTTTATCCTCAACATCATGAAAGAATACCCCCTAAACTCAGCTTCTCTGATGGGAAAACAAAAGACTCTCACCTACCAACGCTACATCGAAGCATGTAAATTTTCTAACGGACTGAGGAAGTACATCCGTGATCCACATTTCAACTCAGAACCAAGAGCATTGAAGTTCACTGAGCAGCAGTTTGCTGACCACTTCAGGGCCATGATCAGCAGTAATGAGACCCATGATGCTCAGTACTACAACATCGCTCCATACCTGGACACCATGGGCACCACACATGTGTCTGTGATAGCTGAGGATGGAACTGCCGTCTCTGTTACCAGCACTATCAATCACATGTTTGGATCCAGAGTGTTCTCCCCTAAAACTGGTGTCATCCTCAATAATGAGTTGGCAGATTTCTGTGGGAAGGCAGATCACATTGTTGCAGGTGAGCAGCCTCCCTCCTCCATGTCCCCTGTTGTCCTGCAGTCCAAGTATAAGACTCTGGTGATTGGCGGGTCAGGTGGCAGCATGATCACCACAGGGATGGCCTTGaccCTCATGAACCACCTGTGGTTTGGGAAGAGTCTGGAGGAGGCCATCGCTGCTCCCGTTGTGTTTGTGGATTCCAAAAACGCACTGAAGTTTGAACCTGACTTTGACAAGGCTGTGGTGGAGGATCTGAAGAATTTTGGGCACACGGTGGAAGATCAAAAGTACTTCTACAACGTGGTCAATGCTGTAGAGAAGGACATCGGTTGCATCCAAGCCGTTTCAGATTCCAGAAAGATGGGCAAGGCAGCTGGTTATTAGTCTTCCAGACTGTTGGTCACTGACTCTGGATATATGTAGATAGTATTCCAACTGTCAATATAGAGCTACTGTAGCTATAGCAAAAACATGGTTCTGGTTATGCCTCAGACAAAATGTGGTTGTGCAAACAGTATATGCTTCTCATCCCATTTACTACAGTATCAACAGGCAACGTGTTGAACAGCAACCTCTGATATTGAGTCACAAATAGGAGCATACTGTATTTCATTGTAATGTAGAGGATGATTGAATGCTAGATCTGTCCTGTCTTCTCTTCCCCATCCCTTTTTCTAGAACTTACTGGATATCATTCCAGTACTGGAATGTATGTACTTaataatgtacactgaacaaaaatataaacacaacaatttcaaagat

Function

NR:

description
gamma-glutamyltransferase 5-like

GO:

id name namespace
GO:0006749 glutathione metabolic process biological_process
GO:0003840 obsolete gamma-glutamyltransferase activity molecular_function

KEGG:

id description
K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605770.2 True 2250 mRNA 0.46 12 23791444 23801151

Neighbor

gene id symbol gene type direction distance location
LOC110525549 hnf1a coding upstream 88153 23677474 ~ 23703291 (+)
LOC110525547 LOC106585491 coding upstream 181617 23608673 ~ 23609827 (+)
asgrl1 LOC106585488 coding upstream 185063 23596212 ~ 23606381 (+)
LOC110525542 NA coding upstream 220792 23560898 ~ 23570652 (+)
LOC110525161 bicdl1 coding upstream 398636 23359077 ~ 23392808 (+)
LOC110525559 LOC106585501 coding downstream 40324 23841475 ~ 23847341 (+)
LOC110525560 LOC106585504 coding downstream 56703 23857854 ~ 23884968 (+)
LOC110525563 LOC106585507 coding downstream 110590 23911741 ~ 23914297 (+)
LOC110525298 LOC106585338 coding downstream 124695 23925846 ~ 23941878 (+)
LOC110525570 LOC106585512 coding downstream 240878 24042029 ~ 24042359 (+)
G487168 NA non-coding upstream 59472 23731045 ~ 23731972 (+)
G487161 NA non-coding upstream 68123 23721089 ~ 23723321 (+)
G487160 NA non-coding upstream 76014 23714025 ~ 23715430 (+)
G487114 NA non-coding upstream 83896 23705549 ~ 23707548 (+)
G487116 NA non-coding upstream 86744 23704339 ~ 23704700 (+)
G487220 LOC106585502 non-coding downstream 13678 23814829 ~ 23817325 (+)
G487228 NA non-coding downstream 35405 23836556 ~ 23837029 (+)
G487236 NA non-coding downstream 46890 23848041 ~ 23848259 (+)
G487248 NA non-coding downstream 74977 23876128 ~ 23876451 (+)
G487249 NA non-coding downstream 75667 23876818 ~ 23877024 (+)
G487146 LOC106585492 other upstream 123517 23653120 ~ 23667927 (+)
G487078 LOC106585486 other upstream 259645 23528740 ~ 23531799 (+)
LOC110525518 LOC106585474 other upstream 599527 23079630 ~ 23197514 (+)
G486127 NA other upstream 1116992 22674242 ~ 22674452 (+)
G485780 NA other upstream 1346825 22441316 ~ 22444619 (+)
G488049 NA other downstream 778810 24579961 ~ 24586313 (+)
G488078 NA other downstream 829818 24630969 ~ 24631396 (+)
G488258 NA other downstream 1137618 24938769 ~ 24939272 (+)
si:dkey-191c17.2 LOC106585342 other downstream 1837710 25638816 ~ 25641178 (+)

Expression


Co-expression Network