LOC110525220 (anapc5)


Basic Information

Item Value
gene id LOC110525220
gene name anapc5
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 23850010 ~ 23855515 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110525220
ATGATAACCAATGGGGTGTTCCATGCCCATGTGTTTGGCATCAAAGATTGGGTGACTCCGTACATCGCCGTTTTGGCCTACTGTCTGTTCATGAGACACATGCTCCTGGCCTACATCAAGCTGCCCTTCAAACATGTGTACAAACTGTACAACGCCCTGCAGCACTACTACCACAGTCACTACGCCCAGCCTGGTGATGGCCAGGTGGGGCTGCCTGCCCTGACTGCAGATGACTCTGACATGGACCTCACCAGCACAGATGACACTgtaggggagaggatggaggaggagctgGACACAGCACCACTGCATGATCTTCCCTACGCTGCCCTCAACCTGGCACCACTGCACTGTCGCTTTGGTCACTAtcaacaggcTGACCTGGCTCTACATGAGGCAATCCGCATCGCCCAGGTGTCCAATGATCACGTGTGCCTGCAGCACTGCCTGAGTTGGCTTTACACGCTGGAACAGATGAAAGGACCTGACAGCTCTGCGCTAACTGAAGACTCTGTGAAAATGGATGTCCACTTCTGTCTACTGTATTTGGCATATCTGGGCATTCATTCCCTGGTCCAGCAGGGGGCGATCCAGGGCAAGACAGCCCATGAGCTCATGGATGCTCTGAAGGACACAGACATCCTGCAAAGTGCTGGAAGCACAGCCTGTCAGAGCTCATAGACATCAGGCTGGCTCAGACTTCATCCATATGGATGATGTATGGCAAGAGGTGGggcCTGTATGGGGCTGTGTCTGAGGTCCTGAAGCATCTGAAGGAGCAGTTTCCCCCTCACACCCAACATGCCAAGggcCTGTATGGGGCTGTGTCTGAGGTCCTGAAGCATCTGAAGGAGCAGTTTCCCCCTCACACCCAACATGCCAAGggcCTGTATGGGGCTGTGTCTGAGGTCCTGAAGCATCTGAAGGAGCAGTTTCCCCCTCACACCCAACATGCCAAGGTGAGGAAAGCTCAAGTGCCGAAGGCGCTGAACCGGACCACTAAAGCGTACAGTATCCTGCAGAGGCTGCAGCTGTACTGTGAGAAGACCAAGTACTCAGAGATGAGCATCAGGCCCTGGCCAGACAGCACCATCTACATGCCCTGGTCTCTGACTATCCTGCACCTGGCCTTCACTCAGGTCAACACACGCAATATACAGACTCTGTGTGTCCTTTATTATCCCATCCTGGCCCATGAGCAGTCATGGATAAGGGCAGAGCTCTGCTGCTGCCAGCCCACTGTCAGGTGGCCACTGCTGGGTCCCAGCCCAGTGGTCAGAGGCATGCAGGTCTGGGCCTGGCTATGCAGACTCTGGTTGAGGCTGTAGCCTACTTCTCCATGCTGGACTGTAAGGGGCGTCTGTGGGACATCCACTACCTGCAGGCCCGACTGCACCACACCCTGGGCCAAACCCCCCAATGCAACAAATGTGCCAAGCTGTTCCACCTGCTGGAGCTGCAGGCGCCGGGGGCAGCCGTCGCCATGCGACTCTGAACAGTCATCACCACCCTAACACAGACCGGTACATATACTGGTGTACTCTGTCTTTGTCATGAACTTCACGCTATCTTTTGTTTCAAATTGCTGCATTAGTAGAGAAACAACTGGTTTAGGCACTCCCAATTTTACATTGCAAATGTGTATCATTTTTATACAATATAAAGATCAAACTTCAAGTCTCTAAAT

Function

symbol description
anapc5 Predicted to be involved in anaphase-promoting complex-dependent catabolic process; positive regulation of mitotic metaphase/anaphase transition; and protein K11-linked ubiquitination. Predicted to act upstream of or within cell division. Predicted to be part of anaphase-promoting complex. Orthologous to human ANAPC5 (anaphase promoting complex subunit 5).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110525220 True 1687 mRNA 0.54 13 23850010 23855515

Neighbor

gene id symbol gene type direction distance location
LOC110525558 LOC106585502 coding downstream 17469 23814802 ~ 23832541 (-)
LOC110525555 LOC106585499 coding downstream 70290 23757804 ~ 23779720 (-)
LOC110525554 LOC106585497 coding downstream 99172 23730000 ~ 23750838 (-)
LOC110525553 LOC106585496 coding downstream 121031 23718380 ~ 23728979 (-)
LOC110525552 LOC106585495 coding downstream 132180 23713875 ~ 23717830 (-)
LOC110525561 LOC106585505 coding upstream 33139 23888654 ~ 23911739 (-)
LOC110525564 NA coding upstream 60281 23915796 ~ 23918064 (-)
LOC110525565 LOC106585509 coding upstream 88371 23943886 ~ 23948503 (-)
LOC110525566 apja coding upstream 114573 23970088 ~ 23972273 (-)
LOC110525568 LOC106585513 coding upstream 169031 24024546 ~ 24031999 (-)
G487620 NA non-coding downstream 10013 23839762 ~ 23839997 (-)
G487553 NA non-coding downstream 120474 23729308 ~ 23729536 (-)
LOC110525551 LOC106585494 non-coding downstream 139880 23706557 ~ 23710228 (-)
G487546 NA non-coding downstream 145751 23703534 ~ 23704259 (-)
G487628 NA non-coding upstream 2347 23857862 ~ 23863007 (-)
G487650 NA non-coding upstream 58851 23914366 ~ 23915707 (-)
G487655 NA non-coding upstream 72377 23927892 ~ 23928124 (-)
G487656 NA non-coding upstream 73736 23929251 ~ 23929771 (-)
G487670 NA non-coding upstream 98361 23953876 ~ 23954168 (-)
LOC110525180 hps4 other downstream 264456 23582127 ~ 23587892 (-)
G487016 NA other downstream 457948 23390017 ~ 23392062 (-)
G487022 bicdl1 other downstream 464103 23385534 ~ 23385907 (-)
G486953 NA other downstream 596649 23251286 ~ 23258106 (-)
G488386 NA other upstream 498018 24353533 ~ 24353823 (-)
LOC110525585 LOC106585524 other upstream 805382 24655788 ~ 24715090 (-)
G489038 NA other upstream 1250690 25106205 ~ 25106570 (-)
G489511 hmcn2 other upstream 1641448 25496963 ~ 25497489 (-)
LOC110525606 LOC106585545 other upstream 2424192 26271759 ~ 26283169 (-)

Expression


Co-expression Network