LOC110525566 (apja)


Basic Information

Item Value
gene id LOC110525566
gene name apja
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 23970088 ~ 23972273 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021605782.2
CAGCGTTGCACCACTCACTCATACTGCCTGTGCTCTCCTCCAGTGACTGATGGGGACCATTCCTTAAACGTGACTTTTTTTCTAGTTTTCAGTGTTGACATTTGGTTTGTTTGAATTTTACTCAACCAGCTCTGGACTGTACAGAAAGGATTTTAAAAGTTTGAAATTATTTTCCATTTCATACTCATGACTTGGAACATGGATCCCACTGTGGAGTATAGAGATACCTATGATTATGATTATGGTGACAACGAAACTATGTGTGACTACTCTGAGTGGGAGCCATCCTACTCCCTTATCCCTGTCCTCTACATGCTCATCTTCATCCTGGGCCTGTCTGGGAATGGAGTGGTCATCTTCACCGTCTGGAGGTCCAAGTCCAAGCGCCGAGCAGCAGATGTCTACATAGGCAACCTGGCCCTGGCTGACCTCACCTTTGTGATCACTCTGCCCCTCTGGGCCGTGTACACAGCACTGGGCTACCACTGGCCCTTTGGTGTGGCCCTGTGTAAGATCAGCAGCTACGTGGTGCTGGTCAACATGTACGCCAGTGTCTTCTGCCTCACCTGCCTGAGCTTTGACCGTTACCTGGCTATCGTCCACTCTCTGTCCAGCAGCCGGCTGCGGTCGCGGGGCACAATGCTGGCCTCCCTGGGGGCCATCTGGCTCCTCTCAGGCCTGCTGGCTGTGCCCACTTTGCTGTTCCGCACCACCGTGGACGACATCAACAGCAACCGCACCACCTGTGCCATGGACTTCAGCCTGGTCACCCTAAACGAGAGGCATGAGTCCCTGTGGATCGCAGGACTCAGCCTGTCGTCCTCTGCCCTGGGCTTCCTCCTGCCGTTCCTGGCCATGACCATCTTCTACTGCTTCATCGGCTGCACCGTCACGCGTCACTTTAACAACCTGCGCAAGGAGGACCAGAAGAAGCGTCGTCTGCTGAAGATCATCACCACCCTGGTGGTTGTATTTGCCATCTGCTGGACCCCATTCCACTTGCTGAAGAGCATGGACGCCCTCTCCTACCtgaacctgtctcccagctcctGTGGGTTTGAGCGCTTCCTCCTGGTGGCCCATCCTTATGCTACCTGCCTGGCTTATGTTAACAGCTGCCTCAACCCCTTCCTGTACGCCTTCTTCGACCTACGCTTCCGCTCCCAGTGCCTGTGCCTGCTCAACCTGAAGAAGGCCATGCATGGACAGATGAGCTCCATGTCCTCCACGCTCAGCGCCCAGACACAGAAGTCAGAGATACAGTCTCTGGCCACCAAAGtgtaaagagaggggagggataggTGGAGTGGGACTGCTGGCTGGTTCCCTGCTGCCACCACAGGAACACTGACTGGTAAACACACAGTTTTTTGGTGTCTGTTATTCAAATGCTTTTAAGGCGTAACAGACAATGAACAATGACTTTGTTTTCCGAAACATGGGTTttcatatacagtatgttttcatTCTTGTGTATATGTACATTTCTCACCCATTTCAACCCAACGGGTGCTTCAGTGGGTAGGGGAGAAGCCCAGGGAGTCCTACAAAGGTTCCCTCTAACCCCTGGACTGGACTCTGAAGCTGGGGAGAGTTGACTGAGCTCCATATAGCtgctttttttcccccacaacGTCTCAGAAAGGTAAATATACTTTTCAGACGGACTCTATTTTTCCTCTTCTCCCTGTTATTCTTTACTGTATAAGGGACCAGAGGGTTttttctgttgttgttatgtatGTCACATGCAAACCTGTTTACACTGGGTAAATCACAAATGTACAGTATTTTCATACTTTTGCTGTTTCAGATGTGTTGATATTTTGTTTTATTACAAGCACTTGTTAAATGAATGAAATGTAAAAGAGGGGAAAATGTGTTTGCAAAGAGACCATATCTTCTTCAGGTTGTTGTTTGTGAAGGTAGGAGACTGggcagaggaggggggggggggtgtaagaggAGGAAAGGTGTTGCAGCTTAATTACAGAGtttgaggaggagacaggggcagACAGGCAGATGGCAGCTGACAAATGTTGTCAGGGAAGTGGGTGGGGGCTTTACAGTGCCCTCTGGTGCCGGGGAGGAAAGGGGACTTCATGAATTTTTTATTGTATTGCATATATGCTTTTGACATCTGTGTAACTAACTACTGTATTAAATAAATATGATCTATGAAA

Function

NR:

description
apelin receptor A-like

GO:

id name namespace
GO:0038166 angiotensin-activated signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004945 angiotensin type II receptor activity molecular_function

KEGG:

id description
K04174 APLNR; apelin receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021605782.2 True 2186 mRNA 0.50 1 23970088 23972273
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110525565 LOC106585509 coding downstream 21585 23943886 ~ 23948503 (-)
LOC110525564 NA coding downstream 52024 23915796 ~ 23918064 (-)
LOC110525561 LOC106585505 coding downstream 58349 23888654 ~ 23911739 (-)
LOC110525220 anapc5 coding downstream 114573 23850010 ~ 23855515 (-)
LOC110525558 LOC106585502 coding downstream 137547 23814802 ~ 23832541 (-)
LOC110525568 LOC106585513 coding upstream 52273 24024546 ~ 24031999 (-)
LOC110525567 LOC106585510 coding upstream 59796 24032069 ~ 24041920 (-)
LOC110525572 LOC106585514 coding upstream 87638 24059911 ~ 24071705 (-)
LOC110525317 dgcr6 coding upstream 100341 24072614 ~ 24079048 (-)
dtx1 LOC106585516 coding upstream 157127 24129400 ~ 24184369 (-)
G487681 NA non-coding downstream 1434 23968449 ~ 23968654 (-)
G487673 NA non-coding downstream 12306 23957574 ~ 23957782 (-)
G487670 NA non-coding downstream 15920 23953876 ~ 23954168 (-)
G487656 NA non-coding downstream 40317 23929251 ~ 23929771 (-)
G487655 NA non-coding downstream 41964 23927892 ~ 23928124 (-)
G487708 NA non-coding upstream 45472 24017745 ~ 24018026 (-)
G487662 NA non-coding upstream 47299 24019572 ~ 24023100 (-)
G487795 NA non-coding upstream 218977 24191250 ~ 24191474 (-)
G487798 NA non-coding upstream 222489 24194762 ~ 24195075 (-)
G487801 NA non-coding upstream 225793 24198066 ~ 24198697 (-)
LOC110525552 LOC106585495 other downstream 252305 23713875 ~ 23717830 (-)
LOC110525180 hps4 other downstream 384534 23582127 ~ 23587892 (-)
G487016 NA other downstream 578026 23390017 ~ 23392062 (-)
G487022 bicdl1 other downstream 584181 23385534 ~ 23385907 (-)
G486953 NA other downstream 716727 23251286 ~ 23258106 (-)
G488386 NA other upstream 381260 24353533 ~ 24353823 (-)
LOC110525585 LOC106585524 other upstream 688624 24655788 ~ 24715090 (-)
G489038 NA other upstream 1133932 25106205 ~ 25106570 (-)
G489511 hmcn2 other upstream 1524690 25496963 ~ 25497489 (-)
LOC110525606 LOC106585545 other upstream 2307434 26271759 ~ 26283169 (-)

Expression

LOC110525566(apja) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 60.
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LOC110525566(apja) Expression in each Bioproject

Bar chart with 19 bars.
LOC110525566(apja) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network