LOC110525317 (dgcr6)


Basic Information

Item Value
gene id LOC110525317
gene name dgcr6
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 24072614 ~ 24079048 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110525317
ATGGCTGAgaAACTACAAACACTTATCAAAGATTTGCCCAGCTCCTTCCAGCAGCGCCTATCCTACACCACACTGAGTGACCTGGCTCTGAGACTCATAGATGGAACAGTGTATGATATAGTTTAGGGACTCCTGGATGTCCAGCACCTGAATCTGTACAACCAGAGACAAAATTTGCACTGTGAGCATCAAGTACTCAAGCAGGATTTGATTCGTAAGCATAAAGAAACCCTGCAGGTTTGCAAGTCACATTGTAGTTATGAAAACAAATAGACAAGGAGAAACAGGAGCTCTGGAGATTCAAGTGAGAGAGGAACAGATGATGGATGACAAGATTTTGGTGGAGATGGACCAAAAGGTTATAAACCAGCAGAACACCAGGGTTCTAAGTAACCACCAATCCCCAGTTGAATCAACACTTTGAGTTGACAATGCAGATGAACCGGCTCAAAGGGATACTTAAACTTCTACAGAAAGAGTCCCAGTAAGGAGGCCTGTcctga

Function

symbol description
dgcr6 Orthologous to several human genes including DGCR6L (DiGeorge syndrome critical region gene 6 like).

NR:

description
protein DGCR6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110525317 True 503 mRNA 0.44 6 24072614 24079048

Neighbor

gene id symbol gene type direction distance location
LOC110525572 LOC106585514 coding downstream 909 24059911 ~ 24071705 (-)
LOC110525567 LOC106585510 coding downstream 30694 24032069 ~ 24041920 (-)
LOC110525568 LOC106585513 coding downstream 40615 24024546 ~ 24031999 (-)
LOC110525566 apja coding downstream 100341 23970088 ~ 23972273 (-)
LOC110525565 LOC106585509 coding downstream 124111 23943886 ~ 23948503 (-)
dtx1 LOC106585516 coding upstream 50352 24129400 ~ 24184369 (-)
ccdc92 LOC106585518 coding upstream 132096 24211144 ~ 24224260 (-)
ncor2 LOC106585520 coding upstream 238864 24317912 ~ 24504123 (-)
LOC118965019 LOC106585477 coding upstream 478439 24557487 ~ 24566324 (-)
LOC118965071 LOC106585477 coding upstream 499657 24578705 ~ 24579373 (-)
G487662 NA non-coding downstream 49514 24019572 ~ 24023100 (-)
G487708 NA non-coding downstream 54588 24017745 ~ 24018026 (-)
G487681 NA non-coding downstream 103960 23968449 ~ 23968654 (-)
G487673 NA non-coding downstream 114832 23957574 ~ 23957782 (-)
G487670 NA non-coding downstream 118446 23953876 ~ 23954168 (-)
G487795 NA non-coding upstream 112202 24191250 ~ 24191474 (-)
G487798 NA non-coding upstream 115714 24194762 ~ 24195075 (-)
G487801 NA non-coding upstream 119018 24198066 ~ 24198697 (-)
G487805 NA non-coding upstream 122874 24201922 ~ 24202251 (-)
G487807 NA non-coding upstream 125833 24204881 ~ 24205232 (-)
LOC110525552 LOC106585495 other downstream 354831 23713875 ~ 23717830 (-)
LOC110525180 hps4 other downstream 487060 23582127 ~ 23587892 (-)
G487016 NA other downstream 680552 23390017 ~ 23392062 (-)
G487022 bicdl1 other downstream 686707 23385534 ~ 23385907 (-)
G486953 NA other downstream 819253 23251286 ~ 23258106 (-)
G488386 NA other upstream 274485 24353533 ~ 24353823 (-)
LOC110525585 LOC106585524 other upstream 581849 24655788 ~ 24715090 (-)
G489038 NA other upstream 1027157 25106205 ~ 25106570 (-)
G489511 hmcn2 other upstream 1417915 25496963 ~ 25497489 (-)
LOC110525606 LOC106585545 other upstream 2200659 26271759 ~ 26283169 (-)

Expression


Co-expression Network